42,924 research outputs found

    Evolution of the G+C content frontier in the rat cytomegalovirus genome

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    Within the 230138 bp of the rat cytomegalovirus (RCMV) genome, the G+C content changes abruptly at position 142644, constituting a G+C content frontier. To the left of this point, overall G+C content is 69.2%, and to the right it is only 47.6%. A region of extremely low G+C content (33.8%) is found in the 5 kb immediately to the right of the frontier, in which there are no predicted coding sequences. To the right of position 147501, the G+C content rises and predicted coding sequences reappear. However, these genes are much shorter (average 848bp, 50% G+C) than those in the left two-thirds of the genome (average 1462bp, 70% G+C). Whole genome alignment of several viruses indicates that the initial ultra-low G+C region appeared in the common ancestor of the genera Cytomegalovirus and Muromegalovirus, and that the lowering of G+C in the right third has been a subsequent process in the lineage leading to RCMV. The left two-thirds of RCMV has stop codon occurrences at 67.5% of their expected level, based on a modified Markov chain model of stop codon distribution, and the corresponding figure for the right third is 78%. Therefore, despite heavy mutation pressure, selective constraint has operated in the right third of the RCMV genome to maintain a degree of gene length unusual for such low G+C sequences

    Erratum to: Effect of moderate red wine intake on cardiac prognosis after recent acute myocardial infarction of subjects with Type 2 diabetes mellitus (Diabetic Medicine, (2006), 23, 9, (974-981), 10.1111/j.1464-5491.2006.01886.x)

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    In an article by Marfella et al, the author name C. Saron is incorrect and should be listed as C. Sardu. Therefore the correct author list is: R. Marfella, F. Cacciapuoti, M. Siniscalchi, F. C. Sasso, F. Marchese, F. Cinone, E. Musacchio, M. A. Marfella, L. Ruggiero, G. Chiorazzo, D. Liberti, G. Chiorazzo, G. F. Nicoletti, C. Sardu, F. D'Andrea, C. Ammendola, M. Verza and L. Coppola.In an article by Marfella et al, the author name C. Saron is incorrect and should be listed as C. Sardu. Therefore the correct author list is: R. Marfella, F. Cacciapuoti, M. Siniscalchi, F. C. Sasso, F. Marchese, F. Cinone, E. Musacchio, M. A. Marfella, L. Ruggiero, G. Chiorazzo, D. Liberti, G. Chiorazzo, G. F. Nicoletti, C. Sardu, F. D'Andrea, C. Ammendola, M. Verza and L. Coppola

    Measurement of the ratio of prompt χ c to J / ψ production in pp collisions at √s = 7 TeV

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    The prompt production of charmonium χ c and J / ψ states is studied in proton-proton collisions at a centre-of-mass energy of √s = 7 TeV at the Large Hadron Collider. The χ c and J / ψ mesons are identified through their decays χ c → J / ψ γ and J / ψ → μ + μ - using 36 pb - 1 of data collected by the LHCb detector in 2010. The ratio of the prompt production cross-sections for χ c and J / ψ, σ (χ c → J / ψ γ) / σ (J / ψ), is determined as a function of the J / ψ transverse momentum in the range 2 < p T J / ψ < 15 GeV / c. The results are in excellent agreement with next-to-leading order non-relativistic expectations and show a significant discrepancy compared with the colour singlet model prediction at leading order, especially in the low p T J / ψ region

    Acute Ethanol Administration Rapidly Increases Phosphorylation of Conventional Protein Kinase C in Specific Mammalian Brain Regions in Vivo

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    Background Protein kinase C (PKC) is a family of isoenzymes that regulate a variety of functions in the central nervous system including neurotransmitter release, ion channel activity, and cell differentiation. Growing evidence suggests that specific isoforms of PKC influence a variety of behavioral, biochemical, and physiological effects of ethanol in mammals. The purpose of this study was to determine whether acute ethanol exposure alters phosphorylation of conventional PKC isoforms at a threonine 674 (p-cPKC) site in the hydrophobic domain of the kinase, which is required for its catalytic activity. Methods Male rats were administered a dose range of ethanol (0, 0.5, 1, or 2 g/kg, intragastric) and brain tissue was removed 10 minutes later for evaluation of changes in p-cPKC expression using immunohistochemistry and Western blot methods. Results Immunohistochemical data show that the highest dose of ethanol (2 g/kg) rapidly increases p-cPKC immunoreactivity specifically in the nucleus accumbens (core and shell), lateral septum, and hippocampus (CA3 and dentate gyrus). Western blot analysis further showed that ethanol (2 g/kg) increased p-cPKC expression in the P2 membrane fraction of tissue from the nucleus accumbens and hippocampus. Although p-cPKC was expressed in numerous other brain regions, including the caudate nucleus, amygdala, and cortex, no changes were observed in response to acute ethanol. Total PKC? immunoreactivity was surveyed throughout the brain and showed no change following acute ethanol injection

    Author Correction: A corridor of exposed ice-rich bedrock across Titan’s tropical region (Nature Astronomy, (2019), 3, 7, (642-648), 10.1038/s41550-019-0756-5)

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    In the version of this Article originally published, the author Rosaly Lopes was mistakenly affiliated with Northern Arizona University. Her affiliation has now been corrected to: Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA. © 2019, Springer Nature Limited

    Dispelling the Myths Behind First-author Citation Counts

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    We conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more sophisticated methods

    DFT and experimental study of elemental mercury (Hg<sup>0</sup>) removal by 2D-g-C<sub>3</sub>N<sub>4</sub>

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    2D-g-C3N4 nanosheet was prepared and employed for the adsorption of elemental mercury (Hg0). The g-C3N4 was analyzed through X-ray diffraction (XRD), scanning electron microscope (SEM) and Fourier transform infrared spectroscopy (FT-IR) methods, and the results showed that the prepared sample was well-defined 2D-nanosheet. The 2D-g-C3N4 sorbent exhibited a high Hg0 removal efficiency (&gt; 90%) at the condition of temperature 120 °C. To investigate the mechanism of Hg0 adsorption on the 2D-g-C3N4 surface, corresponding theoretical exploration based on the first principle prediction and X-ray photoelectron spectroscopy (XPS) test was implemented. The DFT calculation results showed that Hg0 was strongly bound to the B1 site of the g-C3N4 surface with an adsorption energy change of -162.2 kJ mol−1, the equilibrium distance of Hg-C was 3.473 Å, and electron transfer between Hg and C atoms was 0.02. The results of XPS showed the main species of mercury was HgO on the surface of 2D-g-C3N4 sample and the interaction between C3N4 surface and Hg0 was physisorption. This study provides a demonstration of proof-of-concept demonstration that g-C3N4 is a promising sorbent capable of capturing Hg0, and presents in-depth understanding of Hg0 adsorption mechanism on 2D-g-C3N4 sorbent.Sanitary Engineerin

    Scaling of oxygen consumption of Lake Magadi tilapia, a fish living at 37 degree C

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    Rates of oxygen consumption were measured in the geothermal, hot spring fish, Oreochromis alcalicus grahami by stopped flow respirometry. At 37 degree C, routine oxygen, consumption followed the allometric relationship: Vo sub(2)=0.738 M super(0.75), where Vo sub(2) is ml O sub(2)/h and M is body mass (g). This represents a routine metabolic rate for a 10 g fish at 37 degree C of 0.415 ml O sub(2)/g/h (16.4 mu mol O sub(2)/g/h). Acutely increasing the temperature from 37 to 42 degree C significantly elevated the rate of O sub(2) consumption from 0.739 to 0.970 ml O sub(2)/g/h (Q sub(10)=1.72). In the field, O. a. grahami was observed to be 'gulping' air from the surface of the water especially in hot springs that exceeded 40 degree C, O. a. grahami may utilize aerial respiration when O sub(2) requirements are high.TR: CS9609969Source type: Electronic(1

    Drawing the Line: How African, Caribbean and White British Women Live Out Psychologically Abusive Experiences

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    The final, definitive version of this paper has been published in Violence Against Women, 19 (9):1104-32, Sept 2013 by SAGE Publications Ltd, All rights reserved. © The Author(s) 2013. The online version of this article can be found at: http://vaw.sagepub.com/content/19/9/110
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