56 research outputs found
ALGAAS HBV performance in frequency tripling at 255 GHZ
This paper presents a novel method to investigate the efficiency of a tripler with a HBV diode based on Al0.7Ga0.3As/GaAs. The HBV diodes with different mesa diameters have been fabricated and their DC characteristics have been measured. These characteristics are used by a combined genetic algorithm/harmonic balance simulator to calculate the optimum impedances and output powers at the frequency of 255 GHz. A comparison of the conversion efficiencies are presented for the different structures
A novel evolutionary approach for the analysis and optimization of THz nonlinear circuits
Fabrication, Testing, and Lumped Element Modeling of Planar Heterostructure Barrier Varactors
Cinética de desinfecção viral em água de consumo humano mediante exposição ao cloro, utilizando como modelo o adenovírus recombinante
Dissertação (mestrado) - Universidade Federal de Santa Catarina, Centro de Ciências Biológicas, Programa de Pós-Graduação em Biotecnologia e Biociências, Florianópolis, 2014.No Brasil, a Portaria MS 2.914/2011 exige a ausência de coliformes totais e E. coli na água tratada, entretanto é fundamental que o tratamento seja eficiente para todos os microrganismos patogênicos. A desinfecção nas Estações de Tratamento de Água (ETA) é comumente realizada com cloro. O adenovírus recombinante (rAdV) expressa proteína verde fluorescente (GFP) quando se replica nas células HEK 293A, e foi escolhido, como um modelo para avaliar a eficiência de desinfecção em amostras de água filtradas de duas ETAs (Lagoa do Peri (pH 6.9) e Morro dos Quadros (pH 6.5)), a 15°C e 20°C e com 0,2 mg/L e 0,5 mg/L de cloro livre. O tampão livre de demanda de cloro (BDF) (pH 6.9 e 8.0) foi utilizado como controle. As amostras foram caracterizadas físico-quimicamente e quanto ao padrão bacteriológico. A partir da curva da expressão da GFP, foi escolhido o período de 24h pós-infecção para os ensaios de citometria de fluxo (FACS) e microscopia de fluorescência (MF). Após padronizadas, as técnicas apresentaram como limite de detecção a diluição viral de 10-4 (FACS) e 10-6 (MF), sendo a MF escolhida para averiguar a inativação de rAdV por cloro. A técnica de qPCR foi escolhida como método molecular. O tempo necessário para inativar 4log10 de rAdV foi menor que 1 min (para 0,2 mg/L e 0,5 mg/L de cloro livre), utilizando MF, com exceção do BDF pH 8.0 (acima de 2,5 min para 4log10). O pH (6,5, 6,9 e 8.0) exerceu grande influência na eficiência de desinfecção. O ensaio de qPCR não forneceu informações a respeito de rAdV inativado. Os dados foram modelados (Chick-Watson) e observado que os valores de Ct para inativação de 4log10 foi menor que 0,25 para todas as condições experimentais, com exceção do BDF pH 8.0, com Ct acima de 1,249. Os valores de Ct são comparáveis aos reportados na literatura e menores do que os recomendados pela EPA. O modelo demonstrou ter se ajustado bem às condições experimentais realizadas e observadas. Também foram coletadas amostras de água tratada das ETAs (na saída da ETA e na rede de distribuição) e avaliado para coliformes totais, E. coli e adenovírus humano (HAdV), que foi detectado na rede de distribuição da ETA Morro dos Quadros (2,75.10³ UFP/L). Finalmente, foi possível comprovar que os adenovírus são rapidamente inativados em águas superficiais tratadas com cloro e que os adenovírus recombinantes mostraram-se bons modelos para esta avaliação.Abstract : In Brazil, the MS 2.914/2011 ordinance requires the absence of total coliforms and E. coli in treated water, however it is essential that water treatment is effective for all pathogens. Disinfection in Water Treatment Plants (WTP) is commonly performed with chlorine. The recombinant adenovirus (rAdV) expresses green fluorescent protein (GFP) when replicates in HEK 293A cells, and was chosen as a model to evaluate the efficiency of disinfection in filtered water samples from two WTP (Lagoa do Peri (pH 6.9) and Morro dos Quadros (pH 6.5)) under 15 ° C and 20 ° C with 0.2 mg/L and 0.5 mg/L free chlorine. Buffered demand free (BDF) (pH 6.9 and 8.0) was used as control. The samples were characterized physico-chemically as well for bacteriological standards. From curve of GFP expression, the 24-hour period post-infection for flow cytometry assays (FACS) analysis and fluorescence microscopy (FM) was selected. After standardized, techniques showed a detection limit for viral dilution of 10-4 (FACS) and 10-6 (FM) and FM was selected to investigate the decay of rAdV by chlorine. qPCR technique was employed as a molecular method. The time required to inactivate 4log10 of rAdV was less than 1 min (for 0.2 mg/L and 0.5 mg/L) using FM, except for BDF pH 8.0 (up to 2.5 min for 4log10). The pH (6.5, 6.9 and 8.0) had a great influence on the efficiency of disinfection. The qPCR assay was not able to provide information regarding rAdV inactivated. The data were modeled (Chick-Watson) and observed that the Ct values for inactivation of 4log10 was less than 0.25 for all experimental conditions, except for the BDF pH 8.0, with Ct over 1.249. The Ct values are comparable to those reported in the literature and smaller than those recommended by EPA. The model proved to have adjusted well to the experimental conditions used and observed. Samples of treated water from WTP (at the output of WTP and the distribution network) were evaluated for total coliforms, E. coli and human adenovirus (HAdV), which was detected in the distribution network of WTP Morro dos Quadros (2,75.10³ UFP/L). Finally, it was possible to prove that adenoviruses were rapidly inactivated in surface water treated with chlorine and that recombinant adenovirus proved to be good models for this evaluation
In vitro effect of putty calcium silicate materials on human periodontal ligament stem cells
New bioactive materials have been developed for retrograde root filling. These materials come into contact with vital tissues and facilitate biomineralization and apical repair. The objective of this study was to evaluate the cytocompatibility and bioactivity of two bioactive cements, Bio-C Repair (Angelus, Londrina, Pr, Brazil) and TotalFill BC RRM putty (FGK, Dentaire SA, La-Chaux-de-fonds, Switzerland). The biological properties in human periodontal ligament stem cells (hPDLSCs) that were exposed to Bio-C Repair and TotalFill BC RRM putty were studied. Cell viability, migration, and cell adhesion were analyzed. Moreover, qPCR and mineralization assay were performed to evaluate the bioactivity potential of these cements. The results were statistically analyzed using ANOVA and the Tukey test (p < 0.05). It was observed that cell viability and cell migration in Bio-C Repair and TotalFill BC RRM putty were similar to the control without statistically significant differences, except at 72 h when TotalFill BC RRM putty was slightly lower (p < 0.05). Excellent cell adhesion and morphology were observed with both Bio-C Repair and TotalFill BC RRM putty. Both cements promoted the osteo- and cementogenic differentiation of hPDLSCs. These results suggest that Bio-C Repair and TotalFill BC RRM putty are biologically appropriate materials to be used as retrograde obturation material
Microbiological contamination of conventional and reclaimed irrigation water: Evaluation and management measures
[EN] The wide diversity of irrigation water sources (i.e., drinking water, groundwater, reservoir water, river water) includes reclaimed water as a requested measure for increasing water availability, but it is also a challenge as pathogen exposure may increase. This study evaluates the level of microbial contamination in different irrigation waters to improve the knowledge and analyses management measures for safety irrigation. Over a one-year period, the occurrence of a set of viruses, bacteria and protozoa, was quantified and the performance of a wetland system, producing reclaimed water intended for irrigation, was characterized.
Human fecal pollution (HAdV) was found in most of the irrigation water types analysed. Hepatitis E virus (HEV), an emerging zoonotic pathogen, was present in groundwater where porcine contamination was identified (PAdV). The skin-carcinoma associated Merkel cell polyomavirus (MCPyV), was found occasionally in river water. Noroviruses were detected, as expected, in winter, in river water and reclaimed water. Groundwater, river water and reservoir water also harboured potential bacterial pathogens, like Helicobacter pylori, Legionella spp. and Aeromonas spp. that could be internalized and viable inside amoebas like Acanthamoeba castellanii, which was also detected. Neither Giardia cysts, nor any Cryptosporidium oocysts were detected.
The wetland system removed 3 Log(10) of viruses and 5 Log(10) of bacteria, which resembled the river water quality. Irrigation waters were prone to variable contamination levels and according to the European guidance documents, the E. coli (EC) levels were not always acceptable. Sporadic detection of viral pathogens as NoV GII and HAdV was identified in water samples presenting lower EC than the established limit (100MNP/100 mL). When dealing with reclaimed water as a source of irrigation the analysis of some viral parameters, like HAdV during the peak irrigation period (summer and spring) or NoV during the coldest months, could complement existing water management tools based on bacterial indicators.Thiswork was partially funded by a grant fromthe Spanish Ministry of Economy and Competitiveness (MINECO) in the frame of the collaborative international consortium JPIW2013-095-C03-01, JPIW2013095-C03-02 and JPIW2013-095-C03-03 of the Water Challenges for a Changing World Joint Programming Initiative (Water JPI) Pilot Call and partially by AGL2017-86797-C2-1-R. Silvia Bofill-Mas is a SerraHunter fellow at the University of Barcelona. Special thanks to E. Fores, E. Anfruns, and X. Romero from Granollers city council, for the valuable information and help during the sampling campaign.Rusiñol, M.; Hundesa, A.; Cárdenas-Youngs, Y.; Fernández-Bravo, A.; Pérez-Cataluña, A.; Moreno-Mesonero, L.; Moreno Trigos, MY.... (2020). Microbiological contamination of conventional and reclaimed irrigation water: Evaluation and management measures. The Science of The Total Environment. 710:1-11. https://doi.org/10.1016/j.scitotenv.2019.136298S111710Adefisoye, M. A., Nwodo, U. U., Green, E., & Okoh, A. I. (2016). Quantitative PCR Detection and Characterisation of Human Adenovirus, Rotavirus and Hepatitis A Virus in Discharged Effluents of Two Wastewater Treatment Facilities in the Eastern Cape, South Africa. Food and Environmental Virology, 8(4), 262-274. doi:10.1007/s12560-016-9246-4Agrafioti, E., & Diamadopoulos, E. (2012). A strategic plan for reuse of treated municipal wastewater for crop irrigation on the Island of Crete. Agricultural Water Management, 105, 57-64. doi:10.1016/j.agwat.2012.01.002Albinana-Gimenez, N., Miagostovich, M. P., Calgua, B., Huguet, J. M., Matia, L., & Girones, R. (2009). Analysis of adenoviruses and polyomaviruses quantified by qPCR as indicators of water quality in source and drinking-water treatment plants. Water Research, 43(7), 2011-2019. doi:10.1016/j.watres.2009.01.025Alfranca, O., García, J., & Varela, H. (2011). Economic valuation of a created wetland fed with treated wastewater located in a peri-urban park in Catalonia, Spain. Water Science and Technology, 63(5), 891-898. doi:10.2166/wst.2011.267Al-Jassim, N., Ansari, M. I., Harb, M., & Hong, P.-Y. (2015). Removal of bacterial contaminants and antibiotic resistance genes by conventional wastewater treatment processes in Saudi Arabia: Is the treated wastewater safe to reuse for agricultural irrigation? Water Research, 73, 277-290. doi:10.1016/j.watres.2015.01.036Angelakis, A. N., & Durham, B. (2008). Water recycling and reuse in EUREAU countries: Trends and challenges. Desalination, 218(1-3), 3-12. doi:10.1016/j.desal.2006.07.015Atmar, R. L., Opekun, A. R., Gilger, M. A., Estes, M. K., Crawford, S. E., Neill, F. H., & Graham, D. Y. (2008). Norwalk Virus Shedding after Experimental Human Infection. Emerging Infectious Diseases, 14(10), 1553-1557. doi:10.3201/eid1410.080117Banting, G. S., Braithwaite, S., Scott, C., Kim, J., Jeon, B., Ashbolt, N., … Neumann, N. F. (2016). Evaluation of Various Campylobacter-Specific Quantitative PCR (qPCR) Assays for Detection and Enumeration of Campylobacteraceae in Irrigation Water and Wastewater via a Miniaturized Most-Probable-Number–qPCR Assay. Applied and Environmental Microbiology, 82(15), 4743-4756. doi:10.1128/aem.00077-16BELLACK, N. R., KOEHOORN, M. W., MACNAB, Y. C., & MORSHED, M. G. (2006). A conceptual model of water’s role as a reservoir in Helicobacter pylori transmission: a review of the evidence. Epidemiology and Infection, 134(3), 439-449. doi:10.1017/s0950268806006005Bofill-Mas, S., Pina, S., & Girones, R. (2000). Documenting the Epidemiologic Patterns of Polyomaviruses in Human Populations by Studying Their Presence in Urban Sewage. Applied and Environmental Microbiology, 66(1), 238-245. doi:10.1128/aem.66.1.238-245.2000Bofill-Mas, S., Albinana-Gimenez, N., Clemente-Casares, P., Hundesa, A., Rodriguez-Manzano, J., Allard, A., … Girones, R. (2006). Quantification and Stability of Human Adenoviruses and Polyomavirus JCPyV in Wastewater Matrices. Applied and Environmental Microbiology, 72(12), 7894-7896. doi:10.1128/aem.00965-06Bofill-Mas, S., Rodriguez-Manzano, J., Calgua, B., Carratala, A., & Girones, R. (2010). Newly described human polyomaviruses Merkel Cell, KI and WU are present in urban sewage and may represent potential environmental contaminants. Virology Journal, 7(1). doi:10.1186/1743-422x-7-141Bofill-Mas, S., Rusiñol, M., Fernandez-Cassi, X., Carratalà, A., Hundesa, A., & Girones, R. (2013). Quantification of Human and Animal Viruses to Differentiate the Origin of the Fecal Contamination Present in Environmental Samples. BioMed Research International, 2013, 1-11. doi:10.1155/2013/192089Bourrouet, A., Garcia, J., Mujeriego, R., & Peñuelas, G. (2001). Faecal bacteria and bacteriophage inactivation in a full-scale UV disinfection system used for wastewater reclamation. Water Science and Technology, 43(10), 187-194. doi:10.2166/wst.2001.0616Calgua, B., Fumian, T., Rusiñol, M., Rodriguez-Manzano, J., Mbayed, V. A., Bofill-Mas, S., … Girones, R. (2013). Detection and quantification of classic and emerging viruses by skimmed-milk flocculation and PCR in river water from two geographical areas. Water Research, 47(8), 2797-2810. doi:10.1016/j.watres.2013.02.043Carratalà, A., Rusinol, M., Hundesa, A., Biarnes, M., Rodriguez-Manzano, J., Vantarakis, A., … Bofill-Mas, S. (2012). A Novel Tool for Specific Detection and Quantification of Chicken/Turkey Parvoviruses To Trace Poultry Fecal Contamination in the Environment. Applied and Environmental Microbiology, 78(20), 7496-7499. doi:10.1128/aem.01283-12Cervero-Aragó, S., Rodríguez-Martínez, S., Puertas-Bennasar, A., & Araujo, R. M. (2015). Effect of Common Drinking Water Disinfectants, Chlorine and Heat, on Free Legionella and Amoebae-Associated Legionella. PLOS ONE, 10(8), e0134726. doi:10.1371/journal.pone.0134726Collado, L., & Figueras, M. J. (2011). Taxonomy, Epidemiology, and Clinical Relevance of the Genus
Arcobacter. Clinical Microbiology Reviews, 24(1), 174-192. doi:10.1128/cmr.00034-10Da Silva, A. K., Le Saux, J.-C., Parnaudeau, S., Pommepuy, M., Elimelech, M., & Le Guyader, F. S. (2007). Evaluation of Removal of Noroviruses during Wastewater Treatment, Using Real-Time Reverse Transcription-PCR: Different Behaviors of Genogroups I and II. Applied and Environmental Microbiology, 73(24), 7891-7897. doi:10.1128/aem.01428-07Feng, H., Shuda, M., Chang, Y., & Moore, P. S. (2008). Clonal Integration of a Polyomavirus in Human Merkel Cell Carcinoma. Science, 319(5866), 1096-1100. doi:10.1126/science.1152586Fernandez-Cassi, X., Silvera, C., Cervero-Aragó, S., Rusiñol, M., Latif-Eugeni, F., Bruguera-Casamada, C., … Bofill-Mas, S. (2016). Evaluation of the microbiological quality of reclaimed water produced from a lagooning system. Environmental Science and Pollution Research, 23(16), 16816-16833. doi:10.1007/s11356-016-6812-0Figueras, M. J., & Borrego, J. J. (2010). New Perspectives in Monitoring Drinking Water Microbial Quality. International Journal of Environmental Research and Public Health, 7(12), 4179-4202. doi:10.3390/ijerph7124179Ghermandi, A., van den Bergh, J. C. J. M., Brander, L. M., de Groot, H. L. F., & Nunes, P. A. L. D. (2010). Values of natural and human-made wetlands: A meta-analysis. Water Resources Research, 46(12). doi:10.1029/2010wr009071Girones, R., Ferrús, M. A., Alonso, J. L., Rodriguez-Manzano, J., Calgua, B., de Abreu Corrêa, A., … Bofill-Mas, S. (2010). Molecular detection of pathogens in water – The pros and cons of molecular techniques. Water Research, 44(15), 4325-4339. doi:10.1016/j.watres.2010.06.030Gonzales-Gustavson, E., Cárdenas-Youngs, Y., Calvo, M., da Silva, M. F. M., Hundesa, A., Amorós, I., … Girones, R. (2017). Characterization of the efficiency and uncertainty of skimmed milk flocculation for the simultaneous concentration and quantification of water-borne viruses, bacteria and protozoa. Journal of Microbiological Methods, 134, 46-53. doi:10.1016/j.mimet.2017.01.006Gonzales-Gustavson, E., Rusiñol, M., Medema, G., Calvo, M., & Girones, R. (2019). Quantitative risk assessment of norovirus and adenovirus for the use of reclaimed water to irrigate lettuce in Catalonia. Water Research, 153, 91-99. doi:10.1016/j.watres.2018.12.070Hata, A., Katayama, H., Kojima, K., Sano, S., Kasuga, I., Kitajima, M., & Furumai, H. (2014). Effects of rainfall events on the occurrence and detection efficiency of viruses in river water impacted by combined sewer overflows. Science of The Total Environment, 468-469, 757-763. doi:10.1016/j.scitotenv.2013.08.093Hernroth, B. E., Conden-Hansson, A.-C., Rehnstam-Holm, A.-S., Girones, R., & Allard, A. K. (2002). Environmental Factors Influencing Human Viral Pathogens and Their Potential Indicator Organisms in the Blue Mussel,
Mytilus edulis
: the First Scandinavian Report. Applied and Environmental Microbiology, 68(9), 4523-4533. doi:10.1128/aem.68.9.4523-4533.2002Herpers, B. L., de Jongh, B. M., van der Zwaluw, K., & van Hannen, E. J. (2003). Real-Time PCR Assay Targets the 23S-5S Spacer for Direct Detection and Differentiation of
Legionella
spp. and
Legionella pneumophila. Journal of Clinical Microbiology, 41(10), 4815-4816. doi:10.1128/jcm.41.10.4815-4816.2003Hewitt, J., Greening, G. E., Leonard, M., & Lewis, G. D. (2013). Evaluation of human adenovirus and human polyomavirus as indicators of human sewage contamination in the aquatic environment. Water Research, 47(17), 6750-6761. doi:10.1016/j.watres.2013.09.001Hundesa, A., Maluquer de Motes, C., Albinana-Gimenez, N., Rodriguez-Manzano, J., Bofill-Mas, S., Suñen, E., & Rosina Girones, R. (2009). Development of a qPCR assay for the quantification of porcine adenoviruses as an MST tool for swine fecal contamination in the environment. Journal of Virological Methods, 158(1-2), 130-135. doi:10.1016/j.jviromet.2009.02.006Hundesa, A., Bofill-Mas, S., Maluquer de Motes, C., Rodriguez-Manzano, J., Bach, A., Casas, M., & Girones, R. (2010). Development of a quantitative PCR assay for the quantitation of bovine polyomavirus as a microbial source-tracking tool. Journal of Virological Methods, 163(2), 385-389. doi:10.1016/j.jviromet.2009.10.029Jothikumar, N., Cromeans, T. L., Robertson, B. H., Meng, X. J., & Hill, V. R. (2006). A broadly reactive one-step real-time RT-PCR assay for rapid and sensitive detection of hepatitis E virus. Journal of Virological Methods, 131(1), 65-71. doi:10.1016/j.jviromet.2005.07.004Kageyama, T., Kojima, S., Shinohara, M., Uchida, K., Fukushi, S., Hoshino, F. B., … Katayama, K. (2003). Broadly Reactive and Highly Sensitive Assay for Norwalk-Like Viruses Based on Real-Time Quantitative Reverse Transcription-PCR. Journal of Clinical Microbiology, 41(4), 1548-1557. doi:10.1128/jcm.41.4.1548-1557.2003Kalavrouziotis, I. K., Kokkinos, P., Oron, G., Fatone, F., Bolzonella, D., Vatyliotou, M., … Varnavas, S. P. (2013). Current status in wastewater treatment, reuse and research in some mediterranean countries. Desalination and Water Treatment, 53(8), 2015-2030. doi:10.1080/19443994.2013.860632Kauppinen, A., Pitkänen, T., & Miettinen, I. T. (2017). Persistent Norovirus Contamination of Groundwater Supplies in Two Waterborne Outbreaks. Food and Environmental Virology, 10(1), 39-50. doi:10.1007/s12560-017-9320-6Kitajima, M., Iker, B. C., Pepper, I. L., & Gerba, C. P. (2014). Relative abundance and treatment reduction of viruses during wastewater treatment processes — Identification of potential viral indicators. Science of The Total Environment, 488-489, 290-296. doi:10.1016/j.scitotenv.2014.04.087Kokkinos, P., Kozyra, I., Lazic, S., Söderberg, K., Vasickova, P., Bouwknegt, M., … Vantarakis, A. (2016). Virological Quality of Irrigation Water in Leafy Green Vegetables and Berry Fruits Production Chains. Food and Environmental Virology, 9(1), 72-78. doi:10.1007/s12560-016-9264-2Koo, B. S., Lee, H. R., Jeon, E. O., Han, M. S., Min, K. C., Lee, S. B., & Mo, I. P. (2013). Molecular survey of enteric viruses in commercial chicken farms in Korea with a history of enteritis. Poultry Science, 92(11), 2876-2885. doi:10.3382/ps.2013-03280Latif-Eugenín, F., Beaz-Hidalgo, R., Silvera-Simón, C., Fernandez-Cassi, X., & Figueras, M. J. (2017). Chlorinated and ultraviolet radiation -treated reclaimed irrigation water is the source of Aeromonas found in vegetables used for human consumption. Environmental Research, 154, 190-195. doi:10.1016/j.envres.2016.12.026Liu, P., Herzegh, O., Fernandez, M., Hooper, S., Shu, W., Sobolik, J., … Moe, C. (2013). Assessment of human adenovirus removal by qPCR in an advanced water reclamation plant in Georgia, USA. Journal of Applied Microbiology, 115(1), 310-318. doi:10.1111/jam.12237Llorens, E., Matamoros, V., Domingo, V., Bayona, J. M., & García, J. (2009). Water quality improvement in a full-scale tertiary constructed wetland: Effects on conventional and specific organic contaminants. Science of The Total Environment, 407(8), 2517-2524. doi:10.1016/j.scitotenv.2008.12.042Loisy, F., Atmar, R. L., Guillon, P., Le Cann, P., Pommepuy, M., & Le Guyader, F. S. (2005). Real-time RT-PCR for norovirus screening in shellfish. Journal of Virological Methods, 123(1), 1-7. doi:10.1016/j.jviromet.2004.08.023López-Gálvez, F., Truchado, P., Sánchez, G., Aznar, R., Gil, M. I., & Allende, A. (2016). Occurrence of enteric viruses in reclaimed and surface irrigation water: relationship with microbiological and physicochemical indicators. Journal of Applied Microbiology, 121(4), 1180-1188. doi:10.1111/jam.13224Matamoros, V., García, J., & Bayona, J. M. (2008). Organic micropollutant removal in a full-scale surface flow constructed wetland fed with secondary effluent. Water Research, 42(3), 653-660. doi:10.1016/j.watres.2007.08.016Mayer, R. E., Bofill-Mas, S., Egle, L., Reischer, G. H., Schade, M., Fernandez-Cassi, X., … Farnleitner, A. H. (2016). Occurrence of human-associated Bacteroidetes genetic source tracking markers in raw and treated wastewater of municipal and domestic origin and comparison to standard and alternative indicators of faecal pollution. Water Research, 90, 265-276. doi:10.1016/j.watres.2015.12.031McQuaig, S. M., Scott, T. M., Lukasik, J. O., Paul, J. H., & Harwood, V. J. (2009). Quantification of Human Polyomaviruses JC Virus and BK Virus by TaqMan Quantitative PCR and Comparison to Other Water Quality Indicators in Water and Fecal Samples. Applied and Environmental Microbiology, 75(11), 3379-3388. doi:10.1128/aem.02302-08Moreno, Y., Moreno-Mesonero, L., Amorós, I., Pérez, R., Morillo, J. A., & Alonso, J. L. (2018). Multiple identification of most important waterborne protozoa in surface water used for irrigation purposes by 18S rRNA amplicon-based metagenomics. International Journal of Hygiene and Environmental Health, 221(1), 102-111. doi:10.1016/j.ijheh.2017.10.008Moreno-Mesonero, L., Moreno, Y., Alonso, J. L., & Ferrús, M. A. (2016). DVC-FISH and PMA-qPCR techniques to assess the survival of Helicobacter pylori inside Acanthamoeba castellanii. Research in Microbiology, 167(1), 29-34. doi:10.1016/j.resmic.2015.08.002Nilsson, H.-O., Blom, J., Al-Soud, W. A., Ljungh, A., Andersen, L. P., & Wadström, T. (2002). Effect of Cold Starvation, Acid Stress, and Nutrients on Metabolic Activity of
Helicobacter pylori. Applied and Environmental Microbiology, 68(1), 11-19. doi:10.1128/aem.68.1.11-19.2002Pal, A., Sirota, L., Maudru, T., Peden, K., & Lewis, A. M. (2006). Real-time, quantitative PCR assays for the detection of virus-specific DNA in samples with mixed populations of polyomaviruses. Journal of Virological Methods, 135(1), 32-42. doi:10.1016/j.jviromet.2006.01.018Prado, T., de Castro Bruni, A., Barbosa, M. R. F., Garcia, S. C., de Jesus Melo, A. M., & Sato, M. I. Z. (2019). Performance of wastewater reclamation systems in enteric virus removal. Science of The Total Environment, 678, 33-42. doi:10.1016/j.scitotenv.2019.04.435Rachmadi, A. T., Kitajima, M., Pepper, I. L., & Gerba, C. P. (2016). Enteric and indicator virus removal by surface flow wetlands. Science of The Total Environment, 542, 976-982. doi:10.1016/j.scitotenv.2015.11.001Randazzo, W., López-Gálvez, F., Allende, A., Aznar, R., & Sánchez, G. (2016). Evaluation of viability PCR performance for assessing norovirus infectivity in fresh-cut vegetables and irrigation water. International Journal of Food Microbiology, 229, 1-6. doi:10.1016/j.ijfoodmicro.2016.04.010Richards, C. L., Broadaway, S. C., Eggers, M. J., Doyle, J., Pyle, B. H., Camper, A. K., & Ford, T. E. (2015). Detection of Pathogenic and Non-pathogenic Bacteria in Drinking Water and Associated Biofilms on the Crow Reservation, Montana, USA. Microbial Ecology, 76(1), 52-63. doi:10.1007/s00248-015-0595-6Rodriguez-Manzano, J., Alonso, J. L., Ferrús, M. A., Moreno, Y., Amorós, I., Calgua, B., … Girones, R. (2012). Standard and new faecal indicators and pathogens in sewage treatment plants, microbiological parameters for improving the control of reclaimed water. Water Science and Technology, 66(12), 2517-2523. doi:10.2166/wst.2012.233Rusiñol, M., Fernandez-Cassi, X., Hundesa, A., Vieira, C., Kern, A., Eriksson, I., … Girones, R. (2014). Application of human and animal viral microbial source tracking tools in fresh and marine waters from five different geographical areas. Water Research, 59, 119-129. doi:10.1016/j.watres.2014.04.013Rusiñol, M., Fernandez-Cassi, X., Timoneda, N., Carratalà, A., Abril, J. F., Silvera, C., … Girones, R. (2015). Evidence of viral dissemination and seasonality in a Mediterranean river catchment: Implications for water pollution management. Journal of Environmental Management, 159, 58-67. doi:10.1016/j.jenvman.2015.05.019Santiago, P., Moreno, Y., & Ferrús, M. A. (2015). Identification of ViableHelicobacter pyloriin Drinking Water Supplies by Cultural and Molecular Techniques. Helicobacter, 20(4), 252-259. doi:10.1111/hel.12205Seitz, S. R., Leon, J. S., Schwab, K. J., Lyon, G. M., Dowd, M., McDaniels, M., … Moe, C. L. (2011). Norovirus Infectivity in Humans and Persistence in Water. Applied and Environmental Microbiology, 77(19), 6884-6888. doi:10.1128/aem.05806-11Sidhu, J. P. S., Sena, K., Hodgers, L., Palmer, A., & Toze, S. (2018). Comparative enteric viruses and coliphage removal during wastewater treatment processes in a sub-tropical environment. Science of The Total Environment, 616-617, 669-677. doi:10.1016/j.scitotenv.2017.10.265Soller, J. A., Eftim, S. E., & Nappier, S. P. (2018). Direct potable reuse microbial risk assessment methodology: Sensitivity analysis and application to State log credit allocations. Water Research, 128, 286-292. doi:10.1016/j.watres.2017.10.034Souppart, L., Sanciu, G., Cian, A., Wawrzyniak, I., Delbac, F., Capron, M., … Viscogliosi, E. (2009). Molecular epidemiology of human Blastocystis isolates in France. Parasitology Research, 105(2), 413-421. doi:10.1007/s00436-009-1398-9STEELE, M., & ODUMERU, J. (2004). Irrigation Water as Source of Foodborne Pathogens on Fruit and Vegetables. Journal of Food Protection, 67(12), 2839-2849. doi:10.4315/0362-028x-67.12.2839Svraka, S., Duizer, E., Vennema, H., de Bruin, E., van der Veer, B., Dorresteijn, B., & Koopmans, M. (2007). Etiological Role of Viruses in Outbreaks of Acute Gastroenteritis in The Netherlands from 1994 through 2005. Journal of Clinical Microbiology, 45(5), 1389-1394. doi:10.1128/jcm.02305-06Uyttendaele, M., Jaykus, L.-A., Amoah, P., Chiodini, A., Cunliffe, D., Jacxsens, L., … Rao Jasti, P. (2015). Microbial Hazards in Irrigation Water: Standards, Norms, and Testing to Manage Use of Water in Fresh Produce Primary Production. Comprehensive Reviews in Food Science and Food Safety, 14(4), 336-356. doi:10.1111/1541-4337.12133Verani, M., Federig
Surveillance of adenoviruses and noroviruses in European recreational waters
Exposure to human pathogenic viruses in recreational waters has been shown to cause disease outbreaks. In the context of Article 14 of the revised European Bathing Waters Directive 2006/7/EC (rBWD, CEU, 2006) a Europe-wide surveillance study was carried out to determine the frequency of occurrence of two human enteric viruses in recreational waters. Adenoviruses were selected based on their near-universal shedding and environmental survival, and noroviruses (NoV) selected as being the most prevalent gastroenteritis agent worldwide. Concentration of marine and freshwater samples was done by adsorption/elution followed by molecular detection by (RT)-PCR. Out of 1410 samples, 553 (39.2%) were positive for one or more of the target viruses. Adenoviruses, detected in 36.4% of samples, were more prevalent than noroviruses (9.4%), with 3.5% GI and 6.2% GII, some samples being positive for both GI and GII. Of 513 human adenovirus-positive samples, 63 (12.3%) were also norovirus-positive, whereas 69 (7.7%) norovirus-positive samples were adenovirus-negative. More freshwater samples than marine water samples were virus-positive. Out of a small selection of samples tested for adenovirus infectivity, approximately one-quarter were positive. Sixty percent of 132 nested-PCR adenovirus-positive samples analysed by quantitative PCR gave a mean value of over 3000 genome copies per L of water. The simultaneous detection of infectious adenovirus and of adenovirus and NoV by (RT)PCR suggests that the presence of infectious viruses in recreational waters may constitute a public health risk upon exposure. These studies support the case for considering adenoviruses as an indicator of bathing water quality
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