2,256 research outputs found

    Effects of oxygen depletion on transmembrane protein activities

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    Effects of oxygen depletion on cellular membranes are still poorly understood. Amphiphilic molecules are known to modulate the plasma membrane lipid bilayer’s physical properties; in turn, mechanical properties of the lipid bilayer affect signal transduction through numerous mechanosensitive transmembrane proteins including ion channels, receptor tyrosine kinases, NADPH oxidases and G-protein coupled receptors. Thus, the concentration of oxygen in/at the lipid bilayer may modulate its mechanical properties. Here we propose that: (i) under hypoxia, the plasma membrane lipid bilayer would become oxygen depleted, (ii) depletion of oxygen molecules might induce mechanical stress in the lipid bilayer, and (iii) hypoxia-induced mechanical stress in the lipid bilayer activates mechanosensitive transmembrane proteins and downstream signalling pathways. We provide evidence – on the basis of published experimental data – that there can be links between oxygen depletioninduced mechanical stress in the membrane and activation of some mechanisms participating in oxygen sensing, including reactive oxygen species (ROS) produced by mitochondrial complex III, ROS generated at the plasma membrane by NADPH oxidases, ion channels of the transient receptor potential family and increase in intracellular Ca2+ and stabilization of hypoxia-inducible factor 1α (HIF-1α)

    Tissue oxygen demand in regulation of the behavior of the cells in the vasculature.

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    The control of arteriolar diameters in microvasculature has been in the focus of studies on mechanisms matching oxygen demand and supply at the tissue level. Functionally, important vascular elements include endothelial cells (EC), vascular smooth muscle cells (VSMC) and red blood cells (RBC). Integration of these different cell types into functional units aimed at matching tissue oxygen supply with tissue oxygen demand is only achieved when all these cells can respond to the signals of tissue oxygen demand. Many vasoactive agents that serve as signals of tissue oxygen demand have their receptors on all these types of cells (VSMC, EC, and RBC) implying that there can be a coordinated regulation of their behavior by the tissue oxygen demand. Such functions of RBC as oxygen carrying by hemoglobin (Hb), rheology, and release of vasoactive agents are considered. Several common extra- and intracellular signaling pathways that link tissue oxygen demand with control of VSMC contractility, EC permeability, and RBC functioning are discussed

    Scalable k-NN graph construction for visual descriptors

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    The k-NN graph has played a central role in increasingly popular data-driven techniques for various learning and vision tasks; yet, finding an efficient and effective way to construct k-NN graphs remains a challenge, especially for large-scale high-dimensional data. In this paper, we propose a new approach to construct approximate k-NN graphs with emphasis in: efficiency and accuracy. We hierarchically and randomly divide the data points into subsets and build an exact neighborhood graph over each subset, achieving a base approximate neighborhood graph; we then repeat this process for several times to generate multiple neighborhood graphs, which are combined to yield a more accurate approximate neighborhood graph. Furthermore, we propose a neighborhood propagation scheme to further enhance the accuracy. We show both theoretical and empirical accuracy and efficiency of our approach to k-NN graph construction and demonstrate significant speed-up in dealing with large scale visual data.Computer Science, Artificial IntelligenceComputer Science, Interdisciplinary ApplicationsEngineering, Electrical & ElectronicEICPCI-S(ISTP)1

    Energy flux in isotropic turbulence under large variations of external forcing

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    We investigate the response of energy flux in isotropic turbulence to step-function like perturbation in external forcing at large length scales. From both physical experiments and direct numerical simulations, we measured the evolution of the Eulerian velocity structure functions, such as DLL(r)D_{LL}(r), DNN(r)D_{NN}(r), before and after the perturbation in forcing. In both cases, we observed the cascade of the energy excess at large scales cascade through scales to the dissipative range, which can be used to study the dynamics of the cascade, and in particular, to estimate the relevant time scales

    Racism Detection by Analyzing Differential Opinions Through Sentiment Analysis of Tweets Using Stacked Ensemble GCR-NN Model

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    With social media's dominating role in the socio-political landscape, several existing and new forms of racism took place on social media. Racism has emerged on social media in different forms, both hidden and open, hidden with the use of memes and open as the racist remarks using fake identities to incite hatred, violence, and social instability. Although often associated with ethnicity, racism is now thriving based on color, origin, language, cultures, and most importantly religion. Social media opinions and remarks provocating racial differences have been regarded as a serious threat to social, political, and cultural stability and have threatened the peace of different countries. Consequently, social media being the leading source of racist opinions dissemination should be monitored and racism remarks should be detected and blocked timely. This study aims at detecting Tweets that contain racist text by performing the sentiment analysis of Tweets. Owing to the superior performance of deep learning, a stacked ensemble deep learning model is assembled by combining gated recurrent unit (GRU), convolutional neural networks (CNN), and recurrent neural networks RNN, called, Gated Convolutional Recurrent- Neural Networks (GCR-NN). GRU is on the top in the GCR-NN model to extract the suitable and prominent features from raw text, CNN extracts important features for RNN to make accurate predictions. Obviously, several experiments are conducted to investigate and analyze the performance of the proposed GCR-NN within the scope of machine learning and deep learning models indicating the superior performance of GCR-NN with increased 0.98 accuracy. The proposed GCR-NN model can detect 97% of the tweets that contain racist comments

    Book launch and discussion

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    Book launch event for Nick Drake: Dreaming England (Reaktion 2013) at the NN Cafe, Number 9 Guildhall Road, Northampton, NN1 1DP, Thursday 3rd October 2013. Author Nathan Wiseman-Trowse talked about and read from his book on the musician Nick Drake. Music was provided by Gregg Cave and Ant Savage and the book's photographer Paul Hillery DJd. The event was publically promoted and around sixty attended

    About the Authors

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    About the author

    French Translations of Swedish NN Compounds : With Special Focus on Translation Techniques

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    This study examines Swedish NN compounds and their French translations in a bidirectional parallel corpus. A total of 1,741 Swedish NN compounds were attested and 81% corresponded to N or to N A or N de (Det) N constructions in French. The frequency of Swedish NN compounds differs depending on whether the text is source text or target text as well as on text genre (fiction vs. non-fiction) and the style of the author or translator. This work has also classified 1,027 French translations of Swedish NN compounds based on their translation technique. Established equivalent was by far the most frequent technique followed by Generalization. The remaining techniques, such as Modulation, Transposition,and Explicitation, were rarely used. A conclusion drawn from this work is that it is difficult to maintain a strict division between translation studies and contrastive linguistics in an analysis of word formation and translation techniques.</p

    Pathogenic huntingtin inhibits fast axonal transport by activating JNK3 and phosphorylating kinesin

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    Author Posting. © The Author(s), 2009. This is the author's version of the work. It is posted here by permission of Nature America for personal use, not for redistribution. The definitive version was published in Nature Neuroscience 12 (2009): 864-871, doi:10.1038/nn.2346.Selected vulnerability of neurons in Huntington’s disease (HD) suggests alterations in a cellular process particularly critical for neuronal function. Supporting this idea, pathogenic Htt (polyQ-Htt) inhibits fast axonal transport (FAT) in various cellular and animal HD models (mouse and squid), but the molecular basis of this effect remains unknown. Here we show that polyQ-Htt inhibits FAT through a mechanism involving activation of axonal JNK. Accordingly, increased activation of JNK was observed in vivo in cellular and animal HD models. Additional experiments indicate that polyQ-Htt effects on FAT are mediated by the neuron-specific JNK3, and not ubiquitously expressed JNK1, providing a molecular basis for neuron-specific pathology in HD. Mass spectrometry identified a residue in the kinesin-1 motor domain phosphorylated by JNK3, and this modification reduces kinesin-1 binding to microtubules. These data identify JNK3 as a critical mediator of polyQ-Htt toxicity and provides a molecular basis for polyQ-Htt-induced inhibition of FAT.This work was supported by 2007/2008 MBL summer fellowship to GM; an HDSA grant to GM; NIH grants MH066179 to GB; and ALSA, Muscular Dystrophy Association, and NIH (NS23868, NS23320, NS41170) grants to STB

    Identity and Intimacy in Human-Computer Improvisation

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    Artificial intelligence invites a new approach to computing in live music performance. Computers and human performers might collaborate on an equal basis. The perceived identities of participants, both human and machine, are enriched but problematic. The conflicting relationships between these identities impact upon both performers’ and listeners’ experience. The film Orlacs Hände is a starting point for a speculative discussion about human-computer improvisation, problems of identity, the self and the Other, social intimacy and the therapeutic process
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