HAYATI Journal of Biosciences
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Growth, Oxalate and Vitamin C Content of Red Amaranth (Amaranthus tricolor L.) Treated with Salicylic Acid
Get PDFRed amaranth (Amaranthus tricolor L.) contains phytochemicals that are important for human health, however it also contains oxalate that may cause uric acid problem in human health. This experiment was carried out to evaluate the effect of salicylic acid (SA) on growth, oxalate, chlorophyll, and vitamin C contents in red amaranth. Red amaranth seeds were germinated in a plastic pot containing a mixture of top soil and organic fertilizer. Three week-old seedlings were applied with SA of 0 M (control), 10-8, 10-6, 10-4 or 10-2 M. Five replicates were prepared for each treatment. Growth parameters observed were plant height, fresh weight, and dry weight of plant. The Ca-oxalate crystals density was determined by observing stem section under the microscope. Chlorophyll and oxalic acid content were determined by spectrophotometer method, whereas vitamin C content was determined by titration method. The results showed that plant height and root length were tend to decline by SA application, however SA of 10-6 M significantly increased chlorophyll, carotenoid and vitamin C content. All concentrations of SA applied were able to reduce oxalic acid content and Ca-oxalate crystal’s density in stem. It can be inferred that application of SA generally enhances nutrient quality of red amaranth
The Development of Gametophyte Sterilization Method for Liverworts Acrolejeunea fertilis (Reinw., Blume and Nees) Schiffn. In vitro Culture
Get PDFIn vitro culture gametophytes of leafy liverworts often have problems in their sterilization process. These problems due to the high level of contamination and the fragile structure of the gametophyte leafy liverworts. The structures can be easily to damage after exposure to disinfectant. This study aimed to observe the concentration and the exposure time of “Bayclin” commercial bleach to suppress contamination with the viability of Acrolejeunea fertilisgametophytic explants. This research was conducted using control and 6 combination treatments with “Bayclin” concentration (1.00%, 1.25%, and 1.50%) and exposure time 60 and 120 seconds, then accompanied by the addition of Tetracycline 2.5 mg/ml. The qualitative parameters observed were the explant color, the type and location of contamination, and the growth of explants. The quantitative parameters were the percentage of contamination, the percentage of growth, and the number of new branches. The results showed that “Bayclin” 1.25% and 1.50% with 60 seconds exposure time has the lowest percentage of contamination which is 70% until the 7th days after planting. The most common type of internal contamination from the explant is bacteria and fungi. However, the growth of the new branch still occurs in some explants even though it has been contaminated and browned
Virulence and SSR Diversity of Brown Planthopper (Nilaparvata lugens) Adapted on Differential Rice Host Varieties
Get PDFBrown planthopper biotype 1, 2, 3 and a representative field population are required for resistance screening of promising rice lines in Indonesia, but the current biotype stocks has shown deviation in virulence patterns. The objectives of this study were to develop a set of brown planthopper populations with differential virulence and to investigate their genetic variability using SSR marker. Females originated from two field populations were selected on variety Mudgo (carries Bph1 gene) or ASD7 (bph2 gene) using honeydew excretion as the virulence parameter. Selection cycles resulted in population T, M, A, and R, which was raised and adapted on variety TN1 (carries no Bph gene), Mudgo, ASD7, and Rathu Heenathi (Bph3, Bph17), respectively. Population R was the most virulent as expected and can be used to represent a field population, but the remaining populations still showed high virulence level. AMOVA and PCoA results based on analysis with 38 SSR primer pairs revealed partial genetic separation among populations, with population R was the most genetically distant from the remaining populations. The desired virulence character of the remaining populations is expected could be achieved after further selection and prolonged adaptation on their respective hosts
Endophytic Fungi from Four Indonesian Medicinal Plants and Their Inhibitory Effect on Plant Pathogenic Fusarium oxysporum
Get PDFThe medicinal plants Centella asiatica, Curcuma xanthorrhiza, Guazuma ulmifolia, and Hydrocotyle verticillata are widely used in Indonesian traditional medicine, but little is known about their associated endophytic fungi. This research aimed to study the diversity of endophytic fungi derived from functional parts of these plants and to evaluate their potential as antifungal agents against the plant pathogenic fungus Fusarium oxysporum. A total of 17 isolates of endophytic fungi were obtained: nine from leaves of G. ulmifolia, three each from leaves of C. asiatica and H. verticillata, and two from rhizomes of C. xanthorrhiza. The genus Colletotrichum was found in all plants studied, but each plant was associated with different species. Colletotrichum aeschynomenes was associated with C. xanthorrhiza, C. siamense was associated with C. asiatica, and C. tropicale was associated with G. ulmifolia and H. verticillata. The species Curvularia affinis, Diaporthe tectonae, Lasiodiplodia mahajangana, Parengyodontium album, Talaromyces trachyspermus, and Speiropsis pedatospora were found only in G. ulmifolia; while Didymella coffeae-arabicae and Muyocopron laterale were found only in H. verticillata. The endophytic fungi showed inhibition activity against F. oxysporum with inhibition values of 6.0-78.9%, T. trachyspermus JBd10 and C. affinis JBd14 gave the highest inhibition activity
Interspecies Reconstructed Embryonic Cell Interaction between Campbell Hamster (Phodopus campbelli) and Mice (Mus musculus)
Get PDFInterspecies embryo transfer is a seldom-used method to increase the successful conservation of endangered species. The study aimed to determine the potential development of interspecies reconstructed embryos. The present study used two animal models, Campbell hamsters (Phodopus campbelli) and mice (Mus musculus). The isolated inner cell mass (ICM) of hamster embryos were injected into the mice embryos. The embryos were transferred to the pseudopregnant mice using non-surgery embryos transfer methods. The fetuses were collected at day 13.5 of gestation for morphometric measurement and cytochrome b (Cyt b) analysis which used to determine the species of obtained fetuses. The results showed that the viability, pregnancy rate, and embryonic implantation ability of the interpecies reconstructed embryos did not differ significantly (p>0.05) compared to non-reconstructed embryos. Morphometric measurement showed that the crown-rump (CR) and the weight of fetuses in the reconstructed group were significantly higher than non-reconstructed group (p<0.05). According to Cytb analysis, the species of obtained fetuses were mice, while the population of hamster cells were found only in the blighted ovum (resorption). Therefore, it can be concluded that interspecies reconstructed embryos are able to implant. However, the population of mice cells are only found to develop
Modeling Mackerel Tuna (Euthynnus affinis) Habitat in Southern Coast of Java: Influence of Seasonal Upwelling and Negative IOD
Get PDFWe used fishery catch data from Cilacap Fishing Port and Copernicus data set in July 2016-December 2017 to investigate the impacts of Indian Ocean Dipole (IOD) on upwelling and mackerel tuna distribution in the southern coast of Java. This study implemented a Generalized Additive Model (GAM) for habitat prediction of mackerel tuna in the waters. The present study showed that the extreme negative IOD in 2016 caused a weaker southeasterly wind and even a reversal to the northwesterly wind, as seen off Sumatra in September 2016. The situation produced vertically mixed layer thickening and no upwelling during the southeast monsoon event 2016, consequently resulted in warmer temperature and fewer Chlorophyll-a (Chl-a) compared to the southeast monsoon event 2017. The mackerel tuna production significantly dropped in 2016 and rose in 2017, particularly during the upwelling event. The high Habitat Suitability Index (HSI) was found in southern Central Java in July 2017, expanded bigger in August 2017, and decreased in September 2017. During July and August 2016, the high HSI covered only a less area in the region and disappeared in September 2017. The high HSI indicates that the oceanographic factor is consistent with the catch probability of mackerel tuna
The Potency of Anadara nodifera Shell as Natural Testosterone Booster for Male Canary (Seriunus canaria)
Get PDFAnadara clam shell contains high Zinc. This microelement is recognised as acting natural aromatase blocker (NAB) that capable of boosting testosterone level. The aim of this study was to evaluates the testosterone level of Canaries following Anadara nodifera administration. Adult male Canaries (n = 27) were group into 3 with 9 repetition of each i.e T0 [control, was given by Carboxymethyl Cellulose Sodium (Na-CMC)], T1 (Zinc Sulphate 0.013 mg/30 g BW), and T2 (NAB 0.3 mg/30 g BW). The T2 treatment was NAB or shell powder of Anadara nodifera which was diluted 1:1 in Na-CMC. The birds were treated orally for 21 days. The complete blood cell count was performed in a haemo analyser except the erythrocyte was calculated manually in the Improved Neubauer counting chamber. Testosterone level was measured in ELISA. Subsequently gen CYP19 aromatase in syrinx, brain and testis were identified employing IHC and descriptively analysed. The result indicated significant elevated level of testosterone (p<0.05). The expression of CYP19 aromatase receptor was depressed in syrinx, brain and testis. However there was no significant changes on the blood profile (p>0.05). To conclude, Anadara nodifera at 0.3 mg/30 g BW was capable of acting as NAB to promote testosterone level. This was confirmed by the reduction of CYP19 aromatase gene receptors in syrinx, brain and testis. However NAB treatment was not significantly affecting routine blood profile
Application of Environmental DNA (eDNA) Metabarcoding Method to Identify Threatened Sulawesi Mammal Based on 12S rRNA Gene
Get PDFSpecies detection and identification is a crucial steps in biodiversity assessment. Traditional methods are often invasive and resource intensive. The number of studies demonstrating successful of eDNA metabarcoding approach in species identification has increased rapidly in recent years. Some of large terrestrial mammals have reportedly utilize natural salt licks as a source of minerals in the diet and its genetic material left in the environment can be used to identify species from this site. An eDNA metabarcoding protocol had been carried out to identify Sulawesi mammals from Adudu natural salt-licks, Nantu Wildlife Reserve, Gorontalo. Environmental DNA were extracted from water samples, Amplicon libraries were prepared by PCR amplification and Illumina MiSeq high throughput sequencing. Reads processing and taxonomic assignment carried out in two bioinformatics packages, PipeCraft-1.0 and OBITools-2.11. Two endangered Sulawesi mammals species had been identified, i.e. lowland anoa (Bubalus depressicornis) and babirusa (Babyrousa babyrussa). The accuracy of mammal species identification using eDNA metabarcoding is affected by rigorous experimental procedures, DNA marker reliability, and availability of reference sequence database
A Behavioural Study of Free Ranging Ceylon Spotted Deer (Axis axis ceylonensis) in Trincomalee, Sri Lanka
Get PDFAxis axis ceylonensis (Ceylon spotted deer) is a sub species endemic to Sri Lanka. Ecological observations in wild populations of this subspecies have been reported but there is no published research on its behaviour. We report here a behavioural study on a free ranging population of A. a. ceylonensis inhabiting a temple surroundings in Trincomalee, Sri Lanka. Behaviour was quantified by focal sampling on sex age groups in three time zones: 6:30 to 7:30, 12:30-13:30, and 17:00 to 18:00 hours. The deer were more active in the hour after dawn and an hour before dusk. The main activities were feeding and play, the latter common in juveniles. There was a preference to graze on grasses and browse on Ficus sp. leaves. Resting was highest in the afternoon across all groups. This bimodal activity pattern is similar to that of both wild Ceylon and Indian A. axis subspecies despite the absence of predators in the study area. The bimodal activity may be related to thermoregulatory functions while grazing in open grass areas
Grain Quality of Rice (Oryza sativa L.) ‘Menthik Wangi’ of Organic Farming Yields
Get PDFOrganic rice is believed to have better nutrition than conventional rice. Not all organic rice grain is consumed. Most of the organic cultivation yields will be used as seed. Viability test is one of the quality test of rice seed. Viability is seed vitality that can be shown as a physiological and biochemical phenomenon. Seed that have high vigor will achieve high productivity levels as well. The aims of this research was to analyze the quality of rice cultivar Menthik Wangi of organic farming yields. The quality of rice seeds was tested by measuring the viability of seed and crude fat content. The test results demonstrate the viability of the grain has a 100% germination, 100% growth potential maximum, 99.33%, simultaneity grew, 97.33% vigor index, T50 2.33, and seed moisture content 10.67%. The fat content was conducted by soxhlet method and analyzed by T-test. The results showed that organic rice has a higher fat content (0.53%) than non-organic rice (0.24%). It can be concluded that rice seed cultivar Menthik Wangi of organic farming has a higher viability and fat content than the non-organic rice grain