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Replication data for: Fig 5.13, Upper right, Date of estrus by clan for each female, GPDs, 24 Oct 2025
FILE DESCRIPTION
Keywords: Gunnison's prairie dog, estrus date by clan
Filename: Fig 5.13, Upper right, Date of estrus by clan for each female, GPDs, 24 Oct 2025
OLD file name = GPD within-clan synchrony, 1994; 11 Nov 2016
These data are from 1994 only, for the GPDs at PEFO
GPD Redondo Meadow Colony (RMC, studied in 2013 through 2016) was
at Valles Caldera National Preserve (VCNP).
GPD Visitor Center Colony (VCC, studied in 2017 and 2018) was also at VCNP.
GPD colony at Petrified Forest National Park (PEFO) was studied from 1989-1995.
Dates of estrus shown here are Julian dates.
Julian date of copulation = 71 = 12 March, for example.
Julian date of parturition = 84 = March 25, for example.
These Julian data are for NON-LEAP years.
Julian dates for leap years after 28 February differ by 1 day.
This file contains data from only GPD clans in which >=2 females came into estrus
Excluded from this file are TWO coteries in which only one female came into estrus
Note: This file includes ONLY THOSE GPD CLANS FOR
WHICH WE HAVE >= 2 COPDATES
This EXCEL file checked TWO TIMES on 11 Nov 2016
These data used for Fig 5.13 in Hoogland 2026.
This file ready for longterm storage on 19 May 2025.
Filename: Fig 5.13, Upper right, Date of estrus by clan for each female, GPDs, 07 July 2025
GPD clan designation = unique numerical designation for each GPD clan in 1994
GPD clan designation for SYSTAT =
unique numerical designation for each GPD clan in 1994 for statistics in SYSTAT
BTPD = black-tailed prairie dog GPD = Gunnison's prairie dog
WTPD = white-tailed prairie dog UPD = Utah prairie do
Elusive tropical forest canopy diversity revealed through environmental DNA contained in rainwater
This dataset corresponds to the data produced for the WP1 of the project BARCODRAIN, which aimed at identifying how to sample correctly rainwash eDNA (i.e. spatially, through time, and with what rain and DNA collection method)
Subset of data from FAIRTraits: An enriched, FAIR-compliant database of plant traits from Mediterranean populations of 240 species
This archive is composed of six files which are part of the FAIRTraits data base of plant traits. These files are:
- FAIRTraits_DescripEnvVariables.txt: a description of environmental variables attached to FAIRTraits;
- FAIRTraits_LocalEnvironment.txt: variables used to describe the treatments, disturbance (type, intensity and return interval) and soil characteristics in plots
where traits were measured;
- FAIRTraits_MeteoSitesMonth.txt: monthly averages of climatic variables at the site level taken from the meteorological station closest to each of the six sites in which traits were measured;
- FAIRTraits_MeteoSitesYear.txt: yearly averages of climatic variables at the site level taken from the meteorological station closest to each of the six sites in which traits were measured;
- FAIRTraits_PlotCorrespondence.txt: correspondence between plots in which traits were measured and plots with environmental data;
- FAIRTraits_PublishedPapers.txt: a list of papers published with subsets of the FAIRTraits database, between 2001 and 2025.
- ReadMe.txt: a file describing the columns from the six previous files.
The files with information on taxa and trait values are available as two Darwin Core archives on the GBIF infrastructure
Replication for Fig 4.2, BGU, Molar attrition vs age, 15 Sept 2025
These data used for Figure 4.2 in Hoogland 2026, which also shows samples sizes for each age.
Numbers from 1-4 shown are means and standard errors.
1 = high molar cusps
2 = medium-high molar cusps
3 = medium-low molar cusps
4 = low molar cusps
This file ready for longterm storage on 24 January 2025.
BTPDs = B = black-tailed prairie dogs
GPDs = G = Gunnison's prairie dogs
UPDs = U = Utah prairie dogs
I used this file to compare age (in years) height of molar cups for BTPDs, GPDs, and UPD
Replication data for: Fig 5.4, Top, WTPDs, Autogrooms vs ward size, 16 Oct 2025
FILE DESCRIPTION
Keywords: autogrooming, ward size, white-tailed prairie dogs
File name = Fig 5.4, Top. WTPDs, autogrooms per hour, 17 Sept 2025
The number above SE line indicates the number of 30-minute periods of observation.
Small WTPD wards contained 15 adults).
I used these data for Fig 5.4, top graph, for Hoogland 2026.
WTPD = white-tailed prairie dog
WTPDs for this table were not marked, but I switched areas of observation
for each 30-min period of observation. I considered all data to be independent.
All data in this EXCEL are from ADULT WTPDs--i.e., no data from juveniles.
These data ready for longterm storage on 17 Sept 2025.
WTPD data shown here are summaries. Raw data are in my field notes
Data used in the paper: "Leaf longevity and structure, fruit mass and phenology in 52 cultivated varieties and wild accessions of olive"
This archive contains the data used in the paper "Leaf longevity and structure, fruit mass and phenology in 52 cultivated varieties and wild accessions of olive" published in Functional Ecology (2025). It is composed of five files:
1) 2025_Garnieretal-Olive_FunctionalEcology_Readme.txt, which describes the content of the four other files
2) 2025_Garnieretal-Olive_FunctionalEcology_data_leaf_loss.csv
3) 2025_Garnieretal-Olive_FunctionalEcology_data_leaf_pheno.csv
4) 2025_Garnieretal-Olive_FunctionalEcology_data_leaf_traits.csv
5) 2025_Garnieretal-Olive_FunctionalEcology_data_repro_pheno.cs
Shapefiles de la Zone atelier Loire
Shapefiles de la ZAL, de ses plateformes et de ses sites atelier
Replication data for Fig 5.9, Interspecific comparision for visual and vocal alarms, 20 Oct 2025
File description
Keywords: badger, black-tails vs white-tails, visual and vocal alarm alarms
File name: Fig 5.9, Interspecific comparison for visual and vocal alarms, 20 Oct 2025
These data are from Fig 5.9 in Hoogland 2026, and show elapsed time in
minutes (mean + SEM) between appearance of moving stuffed badger from concealed
position vs first visual alarm and first vocal alarm (= alarm call) for BTPDs vs WTPDs
At each ward, students and I pulled moving stuffed badgers three times
from at least three different starting-points.
These data show means + one standard error. Raw data are in my field notes
from 1974 through 1976.
This file ready for longterm storage on 20 Oct 2025.
The numbers above each SE line indicate the number of experiments with a moving stuffed
badger and the number of wards from at which I performed experiments
Replication data for: Fig 5.8, Right side, WTPDs, First responses to badger, 20 Oct 2025
FILE DESCRIPTION
Keywords: badger, white-tailed prairie dog, first visual and vocal alarms, ward rank
File name, Fig 5.8, Right side, WTPDs, First visual and vocal alarms vs ward rank, 20 Oct 2025
Date = 09 Dec 2019
This file does NOT include number of WTPD alarm callers for each experiment
These data are from my doctoral research in 1974-1976. Arap Tiny was near the Barn,
Arap Small was ward on other side of road from Arap Study, and Arap Study was the main study-colony.
One data point for 1st alarm for Arap Tiny seems to missing. N = 8 first alarms in this
file, but N = 9 first alarms in my dissertation and in Hoogland 1981. I do not know why the difference.
1st visual = time before 1st upright alert in response to moving stuffed badger.
1st vocal = time before 1st alarm call in response to moving stuffed badger.
For first upright and first alarm, numbers are for TIME IN MINUTES.
Times seem slow because we pulled the badger SLOWLY.
At each ward we pulled the badger from FIVE DIFFERENT SITES. Site = designation of each site.
These data used for Figure 5.8 in Hoogland 2026.
Numbers shown are Means + SEM.
1st visual= first visual alarm = first upright alert
1st vocal = first alarm call
This file ready for longterm storage on 14 January 2025.
These data are from Fig 5.8 in Hoogland 2026, right side, and show elapsed time in
minute (mean + SEM) between appearance of moving stuffed badger from concealed
position vs first visual alarm and first vocal alarm (= alarm call)
Ward rank = relative ward size. 1 = smallest, 4 = largest
Note that one column of ward sizes INCLUDES juveniles.
At each ward, students and I pulled moving stuffed badgers three times
from at least three different starting-points.
BTPD = black=tailed prairie dog WTPD = white-tailed prairie dog
Date in this file are the RAW DATA from my field notes. Note, however,
that BTPD data in Fig 5.8 Left side are SUMMARIES ONLY. As of
20 Oct 2025, I cannot find the raw data field note for BTPDs
Occurrence of Cuban bee throughout more than a century (125 years) of data
This database contains information on Cuban bees from historical collections of six
natural history museums: Museo Nacional de Historia Natural de Cuba, Instituto de
Ecología y Sistemática (Havana, Cuba), Muséum national d'Histoire naturelle,
American Museum of Natural History, Smithsonian Institution, and the National
Museum of Natural History, Washington, Kansas University, Natural History Museum,
Kansas from three countries. In addition, it includes information from collections made
by the first author between 2018-2024, from the bibliography and online databases,
with information from other institutions: Ontario, Toronto, York University, Packer
Collection, Florida, Gainesville, Division of Plant Industry, Florida State Collection of
Arthropods, Los Angeles County Museum of Natural History, Cornell University Insect
Collection, Illinois Natural History Survey, National Museum of Natural History and
Museum of Comparative Zoology.
The database includes 1322 records, of which 1067 are new records, of bees from
various localities in the Cuban provinces of Havana, Mayabeque and Artemisa. Fiftytwo
species distributed in 23 genera and 4 families were recorded. For these species,
the database provides information on ecology, biogeographic distribution and the
museum where the specimens are kept. Coordinates (GPS) from a single point are
provided for the 117 localities where species were recorded