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Signal amplification and optimization of aptamer microarray by rolling circle amplification
目 錄
口試委員會審定書
授權書 ii
中文摘要 iii
英文摘要 iv
誌謝 v
第一章、 緒論
1-1研究背景 -1-
1-2 研究目的與動機 -2-
1-3 論文架構 -4-
第二章、 理論分析與探討
2-1 生物晶片之起源 -5-
2-2 生物晶片之種類 -6-
2-3 抗原/抗體反應 -8-
2-4 人類免疫球蛋白E -9-
2-5 鏈菌素與生物素之結合作用 -10-
2-6生物晶片之載台製作 -10-
2-7 相轉換法 -11-
2-8 滾動循環擴增技術 -13-
2-9 適合體 -15-
2-10訊號呈現 -16-
第三章、 實驗方法與材料
3-1 材料 -17-
3-2晶片表面處理 -20-
3-3電泳 -20-
3-4 儀器與器材 -20-
3-5 溶液製備 -21-
3-6 實驗步驟 -22-
3-6.1 生物晶片之製備 -22-
3-6.2 滾動循環擴增技術 -25-
3-6.3 環狀模板之製備 -25-
3-6.4 環狀模板分子成形之驗證 -27-
3-6.5 Agarose gel之配製 -27-
3-6.6 液相RCA驗證 -28-
3-6.7 模板是否與引子互補經RCA之影響(微量離心管) -29-
3-6.8 模板是否與引子互補經RCA之影響(生物晶片) -30-
3-6.9 驗證適合體結合Human IgE之能力 -31-
3-6.10驗證適合體結合Human IgE經RCA放大 -33-
3-6.11 驗證蛋白質之非特異性放大 -34-
3-6.12驗證適合體結合Human IgG之能力 -35-
3-6.13驗證適合體結合Human IgG經RCA放大 -37-
3-6.14 不同濃度適合體結合Human IgE比較其螢光強度 -38-
3-6.15 改變RCA反應時間探討其最佳化反應時間 -39
第四章、 結果與討論
4-1環狀模板分子成形之驗證 -40-
4-2液相RCA驗證 -41-
4-3模板是否與引子互補經RCA之影響(微量離心管) -42-
4-4模板是否與引子互補經RCA之影響(生物晶片) -43-
4-5驗證適合體結合Human IgE之能力 -44-
4-6驗證適合體結合Human IgE經RCA結果 -45-
4-7驗證蛋白質之非特異性放大 -46-
4-8驗證適合體結合Human IgG之能力 -46-
4-9驗證適合體結合Human IgG經RCA結果 -47-
4-10不同濃度適合體結合Human IgE比較其螢光強度 -48-
4-11改變RCA反應時間探討其最佳化反應時間 -48-
4-12 綜合討論 -49-
第五章、結論 -52-
第六章、參考文獻 -53-
附錄 -60-
參考文獻
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RNA aptamer, Biochemistry.39, 8983–8992.
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Vandeweerdt P. and Berghmans H. (1991). Temperature-coccentration
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Yanagishita H., Nakane T. and Yoshitome H. (1994). Selection criteria for solvent and gelation medium in the phase inversion process. J. Membr. Sci.,89, 215.
Zeman L. and Fraser T. (1993). Formation of air-cast cellulose acetate
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黃朝裕。壓印式蛋白質微陣列晶片之印台研發。1991。國立清華大學工程與系統科學所微機電組碩士論文。[[abstract]]適合體是一種單股核酸序列,其會在特殊環境狀態下折疊形成四級結構。當適合體折疊形成此種特殊結構時即會具備高特異性、敏感性結合標的分子的能力。適合體所能結合的標的分子主要包括蛋白質、小分子、DNA及RNA。滾動循環擴增技術(Rolling circle amplification,RCA)是一種核酸放大的技術,此種技術可應用於蛋白質檢測上。傳統的免疫分析方式結合RCA(Immuno-RCA)的檢測技術,此種技術有一個主要的缺點即是需建構出antibody-DNA hybrid之架構且建構出此hybrid具有困難性且耗時,因此在本論文中我們藉由Aptamer-DNA之架構去改善Immuno-RCA的缺點。適合體在於使用上有幾項優點為(1)研發容易,(2)穩定性高,(3)合成容易,(4)用途廣泛。在此我們利用適合體結合RCA技術( Aptamer- RCA )發展出一種高敏感性且高特異性檢測蛋白質的技術。本論文中,我們以人類免疫球蛋白E( Human IgE )作為標的蛋白,發展出過敏原晶片檢測系統,並證實適合體結合RCA技術是一種高敏感性、特異性,並可達廣泛的檢測範圍。因適合體可廣泛應用在於多種蛋白質檢測上,因此將此種平臺應用在於過敏檢測上將具有很好的願景。
Aptamers are single-stranded nucleic acids(ss DNA or ss RNA) that are able to fold into defined tertiary structures. If aptamer fold into the special structure, it will have high specificity and affinity while binding with target molecular. Targets to which aptamers have been generated against successfully include proteins, small molecules, and RNA. A different nucleic acid amplification technique called rolling circle amplification (RCA),is adapted to the detection of proteins. A defect of immuno-RCA is that the hybrids can be problematic and time-consuming, so we used aptamer-DNA to improve this problem. Aptamers have some advantages: (1) easy to development, (2) stable, (3) robust methods for their synthesis, and (4) many extensive applications. Aptamer-based rolling circle amplification (aptamer-RCA) is a kind of high sensitivity and high specificity method for the detection of protein. In this research, we utilized human IgE as a model target to develop allergy biochip. And it was demonstrated that the aptamer-RCA presented method was highly sensitive and specific with a broaden detection range and a low detection limit. Because of the wide availability of aptamers for multiple proteins, this platform holds great promise in allergy examination
Immobilization of enzyme on nitrocellulose film for pH-EGFET type biosensors
口試委員審定書
授權書 ii
中文摘要 iv
英文摘要 v
誌謝 vi
第一章 緒論
1.1 研究背景 1
1.2 研究目的與動機 4
1.3 論文架構 6
第二章 理論分析與探討
2.1 生物感測器之種類與應用 8
2.2 酵素固定化技術 11
2.3 延伸式閘極感測場效電晶體之原理 13
2.4 相轉換法(Phase inversion process) 15
2.5 成膜理論 18
2.6 尿素之生理作用機制 22
2.7 尿素循環 25
第三章 材料方法
3.1 實驗材料 26
3.2 實驗流程 27
3.3 感測器之製作 28
3.4 量測系統 29
3.5 硝化纖維素之表面活化 30
3.6 尿素感測器之酵素固定化作用 31
第四章 結果與討論
4.1 硝化纖維素溶液之phase inversion process 32
4.2 硝化纖維素的濃度與旋轉塗佈轉速會影響pH感測度 34
4.3 尿素感測器之反應電壓 35
第五章 結論 36
參考文獻 37
圖表目錄
圖1-1、生物感測器之原理 44
圖1-2、Scheme of the second measurement setup with the microreactor packed with lipase immobilised onto the NC sheets and lipase coupled to glass beads coated with keratin. 45
圖1-3、論文架構圖 46
圖2-1、電化學生物感測器之種類 47
圖2-2、硫酸溶液的氧化還原反應 49
圖2-3、pH Optical sensor 50
圖2-4、QCMs(quartz-crystal microbalances ) 51
圖2-5、MOSFET、ISFET、ENFET之構造 52
圖2-6、離子感測場效電晶體(ISFET) 53
圖2-7、酵素固定化方式(a)吸附(b)微粒包覆(c)包埋(d)交聯(e)共價鍵結 54 圖2-8、延伸式閘極感測場效電晶體(EGFET)之結構圖 55
圖2-9、非對稱離子選擇元件之等效電路 56圖2-10、Schematic representation of a ternary phase diagram of polymer/solvent/nonsolvent 57
圖2-11、Schematic repressentation of casting film/coagulant interface 58
圖2-12、尿素循環 59
圖3-1、實驗流程圖 60
圖3-2、SnO2/ITO玻璃元件基本架構 61
圖3-3、測量系統 62
圖3-4、硝化纖維素溶液配製流程 63
圖3-5、尿素感測器之酵素固定化 64
圖4-1、不同比例的去離子水於硝化纖維素溶液中其元件之感測度 65
圖4-2、添加不同比例去離子水之硝化纖維素溶液之SEM 66
圖4-3、不同濃度的硝化纖維素修飾於延伸式閘極感測場效電晶體表面之感測度 67
圖4-4、不同轉速塗佈修飾硝化纖維膜之元件其pH感測度 68
圖4-5、尿素反應曲線圖 69
圖4-6、尿素濃度64 mg/dl之反應電壓 70
圖4-7、尿素感測器校正曲線圖 71
圖4-8、尿素感測器穩定度測試 72
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陳佳琪。可拋棄式尿素感測器與前置放大器之研究。2003。中原大學電子工程系碩士學位論文。
王彥盛。利用酵素固定化方式製備尿素感測器之研究。2004。國立雲林科技大學電子與資訊工程研究所碩士論文。
謝振榮。2006年8月。物理雙月刊,廿十八卷四期,704-710。[[abstract]]本篇研究中,我們首先提出利用旋轉塗佈技術將硝化纖維膜固定於延伸式閘極感測場效電晶體,並將酵素固定於硝化纖維膜上用以探討蛋白質之固定效率。旋轉塗佈所使用的硝化纖維素溶液之濃度將會影響延伸式閘極感測場效電晶體之感測度,因此為了找出表面最佳化的條件且又能維持其感測度與蛋白質固定能力,針對硝化纖維溶液的配製包含固定化基材濃度、溶劑與非溶劑比例與旋轉塗佈的轉速做探討,其結果顯示配製硝化纖維溶液最主要的參數為9%硝化纖維、3%去離子水與3000 rpm之轉速,將此硝化纖維溶液旋轉塗佈於延伸式閘極感測場效電晶體上其感測度仍可維持在53±1.2 mV/pH,此外為了了解延伸式閘極感測場效電晶體經硝化纖維膜修飾後其固定蛋白質能力,我們利用尿素酶固定於經硝化纖維膜修飾的延伸式閘極感測場效電晶體,形成尿素感測器,此尿素感測器於尿素濃度為64 mg/dl之尿素溶液中其反應電壓達136mV,硝化纖維膜表面的多孔性形成一種低擴散障蔽,使此尿素感測器於反應時間約20秒時即達最大反應電壓。尿素感測器穩定度之測試,元件在尿素溶液中反覆量測,量測27次後此酵素感測器仍然可保持其良好的工作性能。與包埋固定法相互對照,硝化纖維膜之固定蛋白質能力相似,但其形成較低的擴散障蔽。
In this paper, we propose an EGFET biosensor which the enzyme was immobilized on the nitrocellulose film. A porous nitrocellulose layer formed by phase inversion process was deposited on SnO2/ITO gate directly by spin-coated technology. To reach a surface chemistry condition can corresponding EGFET has appropriate pH-sensitivity and protein immobilization capability, the optimized nitrocellulose film manufacturing conditions were discussed through factors of inverse phase process, spin speed of the spin coater concentration of nitrocellulose. To understand the protein immobilization ability of nitrocellulose modified EGFET, we immobilized the urease on nitrocellulose film which used as an urea biosensor. The device shows a response of 136mV in a urea concentration of 64mg/dl. The porous surface of nitrocellulose shows low diffusion barrier, which has a fast response time of 20 sec. After a stability test, we found the sensor could maintain its excellent performance for detection of urea samples at least repeat measured of 27 times during 60 days. It is concluded that the developed nitrocellulose modified EGFET is perspective for its biosensor application for the determination enzyme or antigen-antibody reaction that the proposed method to prepare a selective biological membrane
Studies on the GABAA Receptor of Betel Quid Extracts in Male Rat
目錄
中文摘要……………………………………………………………… ii
英文摘要…………………………………………………………… iv
致謝………………………………………………………………… v
目錄…………………………………………………………………… vi
縮寫表……………………………………………………………… vii
第一章 緒論………………………………………………… 1
第一節 前言……………………………………………………… 1
第二章 文獻探討
第一節 檳榔及其相關成分…………………………………………4
第二節 檳榔對神經系統的影響……………………………………6
第三節 GABA………………………………………………………8
(一) 中樞神經系統………………………………………… 9
(二) 周邊系統………………………………………………10
第四節 GABAA 受體…………………………………………… 11
第五節 Mitogen-activated protein kinase (MAPK) 訊息傳遞路徑
與細胞凋亡……………………………………………… 12
第六節 十個基因簡介…………………………………………… 15
第三章 目的………………………………………………… 19
第四章 材料與方法………………………………………… 20
第一節 實驗設計…………………………………………………20
第二節 實驗動物…………………………………………………20
第三節 實驗前處理與方法………………………………………21
第四節 組織Total RNA萃取…………………………………….25
第五節 反轉錄PCR分析……………………………………… 26
第六節 即時聚合酶鏈鎖反應……………………………………27
第七節 組織蛋白質萃取…………………………………………29
第八節 西方墨點法分析…………………………………………31
第五章 結果………………………………………………… 35
第六章 討論………………………………………………… 38
第七章 結論………………………………………………… 41
參考文獻…………………………………………………… 42
表與圖……………………………………………………… 48
附錄………………………………………………………… 61
參考文獻
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Shu-Chun Lin, Suu-Yi Lu, Szu-Ying Lee, Chi-Yen Lin, Chun-Hsien Chen and Kuo-Wei Chang( 2005).Areca (betel) nut extract activates mitogen-activated protein kinases and NF-jB in oral keratinocytes. Int. J. Cancer: 116, 526–535.
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李啟賓:檳榔萃取液對雄鼠內生性抗氧化作用及生殖效應之研究,大
仁科技大學環境管理研究所.碩士論文(2008).
李音惠: 周邊GABA 對於雄鼠胃排空的抑制效應,國立陽明大學醫學院生理學研究所.碩士論文(2006)
鄭景暉. 嚼食檳榔的健康危害(不包括口腔癌與口腔癌前病變), 中華
民國92年.[[abstract]]近年來許多研究報告紛紛出爐,指出嚼食檳榔可能誘發其他多種系統疾病,包括氣喘(asthma) 、心律不整(cardiac arrhythmia) 、糖尿病(diabetes) 、免疫系統之影響、呼吸系統疾病、心血管系統、消化系統、神經系統功能、泌尿生殖系統之障礙等。嚼食檳榔對神經系統之影響已被確定,可在中樞神經系統與末梢神經系統而產生不同的影響,主要是因為檳榔子(Betel nut)中的檳榔素(Arecoline)與檳榔次鹼(Arecaidine)有關,這兩種檳榔生物鹼(alkaloids)可作用在毒蕈鹼受體(muscarinic receptor) 。 GABA為中樞神經系統中主要的抑制性神經傳導物質,目前已知有三種GABA 受體存在:GABAA、GABAB 與GABAC 受體,過去研究證實周邊神經與組織也有GABA與其受體的存在,GABA 是CNS 中最主要的抑制性神經傳導物質,參與約30% 的腦神經突觸的訊息傳遞,並且調節大部分神經的生理活動。本實驗目的以檳榔萃取液餵食實驗動物,藉由天數不同觀察雄鼠各個腦區其GABA Receptor的表現量,在實驗中我們使用(100 mg/kg/day)荖花檳榔劑量,以餵管方式分別餵食三組(15、30、45天)並犧牲取全腦,萃取mRNA並以RT-PCR方式反轉錄cDNA,再以Real – Time PCR分析其基因表現量。研究結果發現以檳榔萃取液餵食45天的雄鼠,其GABAA Receptor表現量明顯上升,顯示檳榔萃取液可促進老鼠腦部之GABAA Receptor表現量。另外,我們利用西方墨點法的技術來觀察是否GABAA Receptor的蛋白質表現量,經由ERK/MAPK pathway的調控,跟mRNA表現量一致。在未來我們將陸續進行一系列檳榔與神經系統的研究,獲得更多科學證據證明檳榔對於神經系統的傷害,並期盼未來研究能作為臨床醫學上之參考指標,藉此讓國人與衛生單位重視此現象,進而達到宣導與預防之目標。
ABSTRACT
It is estimated that 2 million person in Taiwan have the habit of chewing betel. Reports have shown that chronic betel quid (BQ) chewing is associated with diverse systemic effects, including , Diabetes Hypertension,Metabolic syndrome. There are four main arecal alkaloids, arecoline,arecaidine, guvacine and guvacoline. They also bind to GABA receptors in the brain, contributing to their psychoactive effects. Arecoline is not a simple activating ligand for the GABA receptor since it acts as a GABA receptor `blocker’, preventing normal GABA inhibition of neurotransmission. Previous studies show that chewing BQ may affect the nervous system.We investigated whether administration of Betel Quid Extraction (BQE) induces nervous transmission in the brain of SD rats. BQE (100mg/kg weight/day) was administered orally for 15, 30, 45 day.In addition, parameters studied inlucued the time course of mRNA expression of induced by BQE in SD rats.The results showed that GABRE gene mRNA expression to appear up-regulation. Mitogen - activated protein kinase superfamilies, including extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinases (JNK) and p38, together with transcription factor GABRE, are important signaling elements. We examined the activation of these signaling pathways in SD Rat, treated with Betel Quid Extraction (BQE).In addition, recent reports have raised the potential links between BQ chewing and cancers of oropharynx, esophagus, stomach, urinary bladder and liver. Further in-depth studies are needed to highlight the association between BQ chewing and the body health
The Effect of Rhodopseudomonas sphaeroides to Nitrogen Source in Aquatic System
英文摘要 ................................................ IV
致謝 .................................................... V
目錄 .................................................... VI
圖目錄 .................................................. XI
表目錄 .................................................. XIV
第壹章 緒論 ............................................. 1
1.1. 研究動機 ........................................... 1
1.2. 研究目的 ........................................... 3
第貳章 文獻回顧 ......................................... 5
2.1. 前言 ............................................... 5
2.2. 光合菌簡介與應用 ................................... 11
2.3. 光合反應的固氮和能量獲得的形式 ...................... 16
2.3.1. 光合反應的固氮方式 ............................... 16
2.3.2. 光合菌的獲能形式 ................................. 17
2.4. 光合菌的營養需求 ................................... 18
2.4.1. 光合菌的碳源 ..................................... 18
2.4.2. 光合菌的氮源 ..................................... 19
2.5. 影響固氮作用的因素 ................................. 20
2.6. 光合菌除氮功能研究現況 ............................. 21
2.6.1. 光合菌之研究現況 ................................. 21
2.6.2. 現今生物性除氮方式 ............................... 23
第參章 實驗材料與分析方法 ............................... 26
3.1. 實驗材料 .......................................... 26
3.1.1. 微生物 .......................................... 26
3.1.2. 本實驗使用之培養基 ............................... 27
3.1.3. 實驗用藥品 ....................................... 28
3.2. 實驗用儀器與設備 ................................... 32
3.2.1. 儀器設備 ......................................... 32
3.2.2. 光合菌培養條件和測試儀器 ........................... 32
3.3. 光合菌的培養方法 .................................... 33
3.3.1. 全封閉式厭氣光照培養(厭氣光合菌的培養) ............. 33
3.3.2. 光合菌菌種保存 .................................... 34
3.3.3. 光合菌解凍生長 .................................... 34
3.4. 分析方法 ............................................ 34
3.4.1. 細胞固定化 ........................................ 34
3.4.2. 分光光度計測量方法 ................................. 34
3.4.3. 血球計數盤 ....................................... 35
3.4.4. 水中銨分析 ........................................ 36
3.4.5. 水中亞硝酸鹽(NO2)的分析 ........................... 38
3.4.6. 格蘭氏染色法 ..................................... 39
第肆章 實驗設計 ......................................... 42
4.1. 預備試驗 ............................................ 42
4.1.1 採樣時間與地點 ..................................... 42
4.1.2 水樣採集 ........................................... 42
4.1.3 水質分析方法 ....................................... 42
4.2. 光合菌之培養、定性、定量 ............................. 43
4.2.1 光合菌之收集及吸收波長鑑定 .......................... 43
4.2.2 標準曲線製作 ....................................... 44
4.2.3 光合菌培養環境的設計與製作 ......................... 45
4.2.4 光合菌之生長曲線製作 ............................... 46
4.3. 不同濃度的氮源對光合菌之影響 ........................ 48
4.3.1 針對不同銨氮濃度對光合菌之影響 ......................48
4.3.2 針對不同亞硝酸鹽濃度對光合菌之影響 ................. 48
4.4. 不同菌量的光合菌對氮源之影響 ........................ 49
4.4.1 針對不同光合菌菌量對銨氮混合溶液影響 ................ 49
4.4.2 針對不同光合菌菌量對亞硝酸鹽混合溶液影響 ............ 49
4.5. 應用於養殖池水之模擬試驗 ............................. 50
4.6. 實驗流程 ............................................ 54
4.7. 除氮率計算公式 ...................................... 55
第伍章 結果與討論 ......................................... 56
5.1. 預備試驗 ............................................ 56
5.2. 光合菌之培養、定性、定量 .............................59
5.2.1 R. sphaeroides 吸收光譜 ............................ 59
5.2.2 R. sphaeroides 外型 ................................ 61
5.2.3 光合菌的培養環境 ................................... 62
5.2.4 光合菌之標準曲線製作 ............................... 65
5.2.5 光合菌之生長曲線製作 ................................ 66
5.2.6 銨氮濃度及亞硝酸鹽濃度之標準曲線製作 ................. 68
5.3. 不同濃度的氮源對光合菌之影響 ......................... 70
5.3.1 針對不同銨氮濃度對光合菌之影響 ...................... 70
5.3.2 針對不同亞硝酸鹽濃度對光合菌之影響 .................. 72
5.4. 不同菌量的光合菌對氮源之影響 ......................... 74
5.4.1 針對不同光合菌菌量對銨氮溶液影響 .................... 74
5.4.2 針對不同光合菌菌量對亞硝酸鹽影響 .................... 77
5.5. 應用於養殖池水之模擬試驗 ............................ 80
5.5.1 養殖池水對光合菌去除銨氮效果影響試驗 ............... 80
5.5.2 養殖池水對光合菌去除亞硝酸鹽效果影響試驗 ........... 82
5.5.3 養殖池水中含光合菌及不含光合菌的酸鹼度變化 ......... 84
第陸章 結論與建議 ....................................... 87
6.1. 結論 .............................................. 87
6.2. 建議 ............................................... 88
第柒章 參考文獻 ......................................... 90
圖目錄
圖2-1、全面的疾病防治系統 ............................... 6
圖2-2、氮循環 ........................................... 7
圖2-3、養殖池中的共生關係 ................................. 8
圖2-4、益生菌利用周遭產物淨化環境 ......................... 10
圖2- 5、Metabolic processes of R. palustris. ............. 22
圖2- 6、 Rhodopseudomonas sphaeroides(ESM) ............... 22
圖2-7、光合菌光合作用 .................................... 23
圖3-1、血球計數盤 .........................................36
圖3-2、格蘭氏染色劑 ....................................... 41
圖4-1、對半稀釋法 ......................................... 44
圖4-2、光合反應培養系統 ................................... 45
圖4-3、不再添加營養物質密閉空間之微生物生長曲線圖 .......... 47
圖4-4、實驗室內鰻魚養殖魚缸 ............................... 53
圖4-5、光合菌對氮源影響實驗設計流程圖 ..................... 55
圖5-1、嘉義鰻魚養殖池 .................................... 57
圖5-2、R. sphaeroides 吸收光譜 ........................... 60
圖5-3、使用結晶紫染色R. sphaeroide 放大400 倍 ............ 61
圖5-4、光合菌反應器 ...................................... 63
圖5-5、光合菌反應器內部照度值及溫度比較 ................... 64
圖5-6、R. sphaeroides 定量標準曲線 ....................... 65
圖5-7、R. sphaeroides 之生長曲線與pH 變化 ................ 67
圖5-8、R. sphaeroides 接種後培養第一小時 ................. 67
圖5-9、R. sphaeroides 接種後培養第九十六小時 .............. 68
圖5-10、銨氮濃度之標準曲線 ................................. 69
圖5-11、亞硝酸鹽濃度之標準曲線 .............................. 69
圖5-12、不同濃度的銨氮對光合菌之影響 ......................... 71
圖5-13、不同濃度的銨氮對光合菌之除氮率比較 ...................... 71
圖5-14、不同濃度的亞硝酸鹽對光合菌之影響 ....................... 73
圖5-15、不同濃度的亞硝酸鹽對光合菌之除氮率比較 ..................73
圖5-16、不同菌量的光合菌對銨氮溶液影響 ......................... 75
圖5-17、不同菌量的光合菌對銨氮之除氮率比較 ..................... 76
圖5-18、不同菌量的光合菌對亞硝酸鹽影響 ......................... 78
圖5-19、不同菌量的光合菌對亞硝酸鹽之除氮率比較 ................. 78
圖5-20、不同光合菌菌量對銨氮及亞硝酸鹽影響顏色變化圖 ............ 79
圖5-21、養殖池水中去除銨氮效果影響試驗 ......................... 81
圖5-22、養殖池水中去除亞硝酸鹽效果影響試驗 ..................... 83
圖5-23、養殖池水中除氮效率 .................................... 83
圖5-24、加入光合菌及沒有加入光合菌溶液的酸鹼度變化 ............. 86
圖5-25、養殖池水對光合菌除氮效果影響試驗其顏色變化 ............. 86
表目錄
表2-1、光合菌菌體組成 ........................................ 12
表2-2、光合菌B 群維生素組成 ................................... 12
表2-3、具有氫氣之生產能力之厭氧光合菌 ......................... 15
表2-4、光合菌的分類學特徵 .................................... 16
表2-5、在各種培養條件下光合菌的生長及其獲能形式 ............... 18
表2-6、A comparison of NH4+, NO2- ,DO,BOD, H2S,pH and Temp. . 57
表2-7、A comparison of NH4+, NO2- , PO4, ΣN, ΣP ............ 58
表2-8、現今生物性除氮歸納 .................................... 25
表3-1、BCRC13100 紫色不含硫菌Rhodopseudomonas sphaeroides..... 26
表3-2、Medium 66 ............................................ 27
表3-3、紫色不含硫菌的生長的培養配方 ........................... 27
表4-1、各種菌綠素的吸收波長 .................................. 44
表4-2、不同濃度的氮源對光合菌之影響不同銨氮及亞硝酸鹽濃度配置表 51
表4-3、不同菌量的光合菌對氮源之影響不同光合菌菌量配置表 ........ 52
表4-4、應用於養殖池水之模擬試驗養殖池水之菌量及無機氮配置表..... 53
表5-1、A comparison of NH4+, NO2- ,DO,BOD, H2S,pH and Temp.,℃.57
表5-2、A comparison of NH4+, NO2- , PO4, ΣN, ΣP ............ 58
表5-3、不同濃度的銨氮對光合菌之除氮率比較表 .................... 71
表5-4、不同濃度的亞硝酸鹽對光合菌之除氮率比較表 ................ 73
表5-5、不同菌量的光合菌對銨氮之除氮率比較表 .................... 76
表5-6、不同菌量的光合菌對亞硝酸鹽之除氮率比較表 ................ 79
表5-7、養殖池水中除氮效率 ..................................... 84
表5-8、光合菌於養殖池水中pH 值變化 ............................. 85
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本研究利用紫色不含硫光合菌(Rhodopseudomonas sphaeroides P4株菌)為材料,藉由此微生物製劑方式來控制水中氮源之含量,並對光合菌量的添加菌量及除氮效率之影響加以研究。
本實驗結果顯示光合菌培養至一百二十小時後,菌量可達飽和量濃度109no./ml,光合菌培養過程中的水中酸鹼值於第二十四小後開始趨向弱鹼性,其光合菌數與Abs(OD660)吸光值兩者的相關性R2=0.9941,我們將藉由Abs(OD660)所測得之吸光值作為定量光合菌濃度(Klaas,1982)。第二部分顯示,在五種不同水中亞硝酸鹽濃度下,菌量108 no. /ml於24小時後,水中亞硝酸鹽去除率達100%,另外光合菌在五種不同銨氮濃度下,光合菌菌量於108 no./ml作為120小時後,銨氮去除率平均都可達58%。第三部分顯示不同菌量濃度中,以109no. /ml菌量去除亞硝酸鹽效率最佳,而菌量108no. /ml去除銨氮效率最佳可逹93%。第四部分結果顯示,養殖池水對除氮效率上並無影響效果,但光合菌可穩定養殖池水中的酸鹼度。
The nitrogen cycle of aquatic ecosystem plays an important role, especially inaquatic farms. The effluent of nitrogen source is an invisible killer that could harm the aqua products. In the seawater or fresh water systems, the concentration of Ammonium(NH4+) and Nitrous acid(NO2-) higher than 2mg/L may cause the pathological change of fish. Therefore,this research was designed to study the use of Photosynthetic bacteria (PSB) to biomanipulate the concentration of inorganic nitrogen in the aquatic system. It might be helpful to the aquatic farms and aquatic environments if the increase of nitrogen concentrate is controlled efficiently. Rhodopseudomonas sphaeroides was used in this study and Microbial Pesticides methods were applied to control the content of nitrogen source in aquatic experiments.
The results show that the amount of bacteria was saturated after 120 hours culture of R. sphaeroides. The saturated bacterial concentration reached to 109no./ml. In the process of culture, the pH value becomes weak alkalescence after 24 hour culture. The correlation between the amount of R.sphaeroides and the absorbance value of optical density at 660 nm is R2=0.9941. The Abs(OD660) values were utilized to measure the quantities of R. sphaeroides(Klaas,1982). Then, R. sphaeroides (108 no./ml) were added in five different concentrations of Nitrous acid in water to study the removal of Nitrous acid after 24 hours. The results show that all Nitrogen acid can be removed by R. sphaeroides completely. Next, R. sphaeroides (108 no./ml) were added in five different concentrations of Ammonium to study the removal rate of Ammonium. The removal rate of Ammonium is about 58% after 120 hours. Third, among three levels of bacterium concentration, the concentration of 109no. /ml is the best for removing Nitrous acid. Fourth, R. sphaeroides can stabilize the pH value in the water of aquaculture pond, but it has no effect on the removal of Nitrogen
Hyperosmolarity enhanced the fibrosis susceptibility by phosphorylation of type II TGF-β receptors and up-regulation of Tbeta-RI in MDCK cells
中文摘要 i
英文摘要 iii
致謝 v
縮寫表 vii
第一章 緒論
一、糖尿病與糖尿病腎病變之盛行率 1
二、甘露醇(D -mannitol)簡介 2
三、腎纖維化之致病機轉 3
四、乙型轉型因子以及乙型轉型因子受器結構與命名 4
五、乙型轉型生長因子之作用與調節 6
六、腎纖維化與乙型轉型生長因子受器之作用 7
七、纖維化與乙型轉型生長因子之訊息傳導路徑 8
八、蛋白質降解之泛素蛋白酶體降解途徑 12
九、研究目的 14
第二章 材料與方法
一、試劑與材料 15
二、方法 16
1. 細胞培養 16
(1) 繼代細胞 16
(2) 活化細胞 17
(3) 凍細胞 17
2. 細胞數目 17
3. 細胞存活率 18
4. 酵素連結免疫吸附分析(ELISA) 18
5. 總量核酸核酸萃取及cDNA的製備 18
6. 反轉錄聚合酵素連鎖反應(RT-PCR) 19
7. 瓊脂膠體電泳 20
8. 細胞內第二型乙型轉型生長因子受器磷酸化分析 20
9. 細胞蛋白質總量測定 21
10.西方墨點分析 21
11.免疫沉澱法 23
12.統計分析 24
第三章 結果
一、高滲透壓以及乙型轉型生長因子對纖維蛋白之影響 25
二、高滲透壓對乙型轉型生長因子之影響 26
三、高滲透壓對乙型轉型生長因子接受器之影響 26
1、高滲透壓對乙型轉型生長因子受器蛋白質表現之影響 26
2、高滲透壓對第二型乙型轉型生長因子受器磷酸化之影響 27
四、高滲透壓增加第一型乙型轉型生長因子受器蛋白質之探討
27
五、高滲透壓對乙型轉型生長因子受器蛋白質上Smad 7- Smurf l
之影響 28
六、高滲透壓導致第一型乙型轉型生長因子受器蛋白質半衰期增加
29
七、高滲透壓對乙型轉型生長因子訊息傳導路徑-Smad途徑之影響
30
第四章 討論 31-36
第五章 圖表 36-45
第六章 參考文獻 46-53
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楊景民、郝麗瑾 (1995) 滲透壓及其臨床應用。荷澤醫專學報,7 (1):3-6。[[abstract]]根據衛生署2006年所公佈的資料顯示,糖尿病為95年國人十大死因的第四名。高血糖高滲透壓狀態 (簡稱HHS) 是糖尿病最嚴重的急性併發症之一,其死亡率居高不下。
乙型轉型生長因子(TGF-β)是一個纖維激素,與腎臟纖維化的進展有相關,而隨後活化乙型轉型生長因子受器(TGF-βRII和TGF-βRI),造成細胞外基質蛋白堆積,導致腎臟的纖維化。在這研究當中,我們利用甘露醇誘發高滲透壓來證明在遠端腎小管細胞中第二型乙型轉型生長因子受器磷酸化和第一型乙型轉型生長因子受器表現。我們使用狗腎遠端小管(MDCK)細胞,將細胞培養於不同滲透壓濃度的情況。
在高滲透壓下,經過乙型轉型生長因子(10ng/ml)之處理,藉由酵素連結免疫吸附分析來觀察纖維蛋白表現量。使用西方墨點法來研究乙型轉型生長因子受器以及下游蛋白質的表現。我們發現在甘露醇會提升乙型轉型生長因子所誘導纖維蛋白增加,然而,在滲透壓濃度劑量及時間點下,遠端小管細胞第二型乙型轉型生長因子受器上酪胺酸336位置磷酸化。高滲透壓下也會導致第一型乙型轉型生長因子受器以及乙型轉型生長因子下游訊息路徑Smad的表現。另外,使用cyclohexamide刺激,我們發現高滲透壓增加第一型乙型轉型生長因子受器半衰期,並且使抑制第一型乙型轉型生長因子受器走向 ubiquitination – proteosomal水解路徑。由以上這些結果來看,遠端腎小管細胞在高滲透壓會提升纖維化的敏感性,藉由第二型乙型轉型生長因子受器磷酸化以及第一型乙型轉型生長因子受器表現。
Diabetes mellitus have taken the fourth place in the ten major causes of the death of according to the reports issued by the Department of Health in Taiwan, 2006. Hyperglycemic hyperosmolar state (HHS) is one of the most serious acute complications of diabetes and its mortality rate had been higher.
Transforming growth factor beta 1(TGF-β1) is a fibrokine implicated in the progression of renal fibrosis, followed TGF-β1 receptor (TGF-β RII and TGF-β RI) activation resulting in accumulation of extracllular matrix protein and caused renal cellular fibrosis. In this study, we utilized mannitol-inducing hyperosmolarity to elucidate the phosphorylation of type II TGF-β receptors and expression of Tbeta-RI in distal renal tubular cells. We were used Madin-Darby Canine Kidney (MDCK) cells, cultured in the presence of various on concentration of osmotic.
Hyperosmolarity induce fibronectin protein level by TGF-β1(10ng/ml) using enzyme-linked immunosorbent assay. Western blotting were used to investigate the protein expression of TGF-βreceptors and downstream protein. We showed that mannitol enhanced TGF-β–induced increase in fibronectin in MDCK cells. Moreover, Osmotic concentration time- and dose- dependently induced the phosphorylation of Tbeta RII in tyrosine 336 in MDCK cells. Hyperosmolarity also induced increase expression of Tbeta RI and Smad signal pathway. In addition, by using cyclohexamide, we showed that hyperosmolarity significantly increased down-regulated the half-life and inhibited protein levels of TbetaRI by poly-ubiquitination and proteosomal degradation. These results suggest that hyperosmolarity increased the fibrosis susceptibility by phosphorylation of type II TGF-β receptors and up-regulation of the Tbeta-RI expression in MDCK cells
Recovery of Valuable Metals in Waste Batteries by a New Thermal Separation Method
[[abstract]]新型高溫分離法回收電池中有價值金屬之研究隨經濟的快速發達,乾電池用量亦隨之逐年增加,近年來廢乾電池之處理廣泛受到關注,為此申請人以熱熔融法為原思考出發點,改良成新型之高溫分離技術來處理廢乾電池,本研究之目的係針對廢乾電池中有價值金屬之回收技術做整體探討,研究工作預計分成三年完成,第一年擬於實驗室中之高溫分離系統完成碳鋅電池之分離處理,希望能高效率回收電池中之Fe、Mn 與Zn,並釐清添加劑對分離機制之影響。第二年將修改系統以配合鎳鎘電池之特性,以高效率地回收電池中之Cd、Fe 與Ni,之後將整合前兩年實驗經驗,希望能在第三年於模廠進行實驗,分別測試碳鋅、鹼性與鎳鎘電池,以模廠操作經驗來研擬出渣系統之改善方法,並提出未來實廠運作時可行之設計方式,總體而言,本計畫將以提供關於高溫分離技術許多科學與實務上之資訊,提供從事相關領域研究之先進做參考。
With rapid economic developing, the amount of used batteries also increases significantly. The final disposal of used batteries is of concern at present so we apply a thermal separation technology of modified vitrification. The object of the three-year research is to evaluate the effect of this technology on the recovery of useful metals from used batteries. In this study, it is attempted to treat C-Zn batteries to recover C, Fe, Mn, and Zn with high efficiency and investigate the effect of the additives on the metal separation. In the second year, we will modify the thermal separation system for the treatment of Ni-Cd batteries and try to recover Cd, Fe and Ni effectively. Based on the operation experience during the first two years, it is planed to conduct the tests in a pilot plant. Three types of batteries, including C-Zn, alkaline, and Ni-Cd batteries, will be treated with different parameters. We wish to improve the way of discharging molten materials and provide useful experience for the operation in a real scale plant. Overall speaking, the whole project will provide much useful scientific and practical information for researchers who interest in the thermal separation technology
An Externsion of Trust and Privacy with TPB and TAM Model in the Intial Adoption of On-Line Shopping
研究領域:管理科
Gene Therapy and Analysis of the Effect of Anti-Inflammatory Factors for Osteoarthritis
研究領域:臨床醫學類, 生物技術
計畫編號:NSC98-2314-B273-001-MY
Squid Frozen Storage Quality Improvement and Product Development Research
研究領域:食品科技, 漁業類
計畫編號:98農科-3.1.4-漁-F1(1)[[abstract]]1.計畫目標: (1)現有遠洋魷魚儲運品質易因魚獲後處理及冷凍條件之不穩定,造成魷魚外皮膜色素胞之變色,影響魷魚外觀及商品價值。為維持捕獲魷魚遠洋儲運中之品質,需提供業者可行的儲運品質提昇方案,確保長時低溫儲運過程中魚體表面乾燥、氧化及色素胞生理能機崩解造成的劣變現象得以控制並維持較高的商品價值。 (2)魷魚提供國人優良的蛋白質來源及豐富的高度不飽和脂肪酸,是國人良好的海洋食品來源。但魷魚肌肉蛋白質組織結構的特性,造成魷魚經過加熱或乾燥後質感大幅改變,形成硬而較具彈性的肉質組織,對幼兒及銀髮族而言並不是一種容易入口消化的蛋白質,為有效提昇資源的利用實需提供轉變原有肉質結構為易被消化分解的蛋白質的加工方式,並提高其附加價值,從單純的食品提昇為具保健機能特質的食品。產業結構層次藉此得以優質化及精緻化,創造更多的市場競爭力及經濟力。 2.重要工作項目: (1)針對魷魚遠洋儲運過程中魚體表皮因儲運環境產生的生化變化,藉助加工技術的開發,希望能有效的將其劣化的速度減緩或停止。此技術可能需藉助保鮮劑之效益,調控儲運過程中對表皮組織產生的乾燥變性、氧化反應及各項生化劣變以維持最大的商品價值及最少的經濟損耗。 (2)藉著酵素加工技術的利用有效的將不易分解利用的魷魚蛋白質資源轉化為具機能特性的小分子胜肽及胺基酸,分析此類產品的自由基清除效力、降血壓能力、抑制糖解酵素活性的表現及酪氨酸酶抑制活性。探討其各種機能特性表現與加工條件間之關係,應用加工條件之調控強化其機能性之表現,拓廣產品可能應用方向。 3.預期效益:(1)改善遠洋魷魚儲運品質,提升商品價格,穩定魷魚原料供應品質,確保原料安全衛生。(2)改善魷魚蛋白質資源的有效利用,提昇產品機能特性,拓展魷魚加工層次的優質及精緻化,確保漁民收益。
1. Program goals: (1) Frozen squid undergo deterioration during storage primary due to discoloration of skin. Improper way of handling and storage environment cause the reject of product and thus economic loss. The aim of this project is to develop effective treatment to keep squid quality without dehydration, oxidation and discoloration during frozen storage. (2)Squid are excellent marine food resources can provide a rich source of protein and high unsaturated fatty acids. However, the organizational structure of squid muscle protein properties, to withstand hot and dry will form a more flexible and hardness succulent organization, is not easy for human digestion and absorption. In order to effectively enhance the use of resources, can be developed to provide easily digested protein hydrolysis decomposition products processing. This is not only enhance its value-added, will also be upgraded to a health care function of the characteristics of food. Industrial level could be high-quality and refined to create more market competitiveness and economic strength. 2. Key projects: (1)This project focuses on gaining a better understanding on how the deterioration reaction occurs. Properly handling and food additives would be efficient for prevention squid from an inappropriate commercial value loss by dehydration, lipid oxidation and fading skin color. (2)Bioactive peptides can be released by enzymatic proteolysis of squid protein and the free radical scavenging activity, angiotensin-I-converting enzyme inhibitory activity α-amylase inhibitory activity, tyrosinase inhibitory activity were assayed. Controlled enzymatic hydrolysis of squid proteins may produce a series of small polypeptides which can modify and even improve functional properties and the application of squid proteins. 3. Anticipated benefits: (1)Squid storage quality improve and enhance the value of catch merchandise. Squid supply can keep quality and safety. (2)The effective development and utilization of resources and upgrade the squid protein functional properties of products. Industrial level could be high-quality and refined to create more market competitiveness and economic strength and to ensure that fishermen's income
The Innovative Research about the Development of Intelligent Solar Illumination System(I)
研究領域:能源工程, 光電工程
計畫編號:NSC98-2622-E273-004-CC