1,721,230 research outputs found
13C-isotope-based protocol for prenyl lipid metabolic analysis in zebrafish embryos
No full textMetabolism has a decisive role in many fundamental biological processes, including organism development and tissue homeostasis. Here we describe a protocol for fast and reliable 13C-isotope-based in vivo metabolic profiling. This protocol covers the loading of isotope precursor; extraction, preparation and quantification of the labeled lipid metabolites (e.g., the prenyl lipid CoQ10) by the means of HPLC-MS; and its analysis in zebrafish embryos. This protocol can be applied to different types of experimental settings, including tissue-specific metabolic analyses or dynamic metabolic changes that occur during vertebrate embryogenesis. The protocol takes 5–7 d to complete, requiring minimal equipment and analytical expertise, and it represents a unique alternative to the existing ex vivo (e.g., cell lines) isotope-based metabolic methods. This procedure represents a valuable approach for researchers interested in studying the effect of gene manipulation on lipid metabolism in zebrafish and in understanding the genetic conditions that result in metabolism dysfunction
High-performance liquid chromatography/high-resolution mass spectrometry for the characterization of transformation products of ionic liquids
Full text linkRationaleIonic liquids (ILs) are a subject of active research in the field of alternative solvents. We studied the behaviour of a piperidine IL, 1-butyl-1-methylpiperidinium tetrafluoroborate (BMPA), through the elucidation of its transformation products (TPs) in water.MethodsThe transformation pathways of BMPA were investigated using high-performance liquid chromatography (HPLC) combined with a hybrid LTQ-Orbitrap instrument on the basis of mass defect filtering. TPs of BMPA were identified by fragmentation patterns and accurate mass measurements.ResultsThe separation and identification of 32 TPs was achieved. BMPA can be oxidized at different positions in the alkyl chains. The ultimate products corresponds to N-methyl-piperidinium and some byproducts involving ring-opening. Tests of acute toxicity, evaluated with Vibrio Fischeri bacteria, show that BMPA transformation proceeds through the formation of slightly harmful compounds.ConclusionsResults showed that the main transformation pathways of BMPA were alkyl chain hydroxylation/shortening and de-alkylation, and that HPLC/LTQ-Orbitrap can serve as an important analytical platform to gather the unknown TPs of ILs
Assessment of the photocatalytic transformation of pyridinium-based ionic liquids in water
Full text linkWe studied some ionic liquids (ILs) belonging to the pyridinium class under photocatalytic treatment. In particularly, we analysed how the length of the alkyl chain, the kind of inorganic ion and the type of substituents could influence the disappearance rate, the mineralization extent, the acute toxicity and the transformation mechanism. For such, we selected some pyridinium derivatives with different alkyl chain but the same anion, namely tetrafluoroborate (1-ethylpyridinium, 1-butylpyridinium, 1-hexylpyridinium), with two alkyl substituents (4-methyl-l-butylpyridinium) and with a different substituent (1-cyanopropylpyridinium). Then, on a selected IL (1-butylpyridinium), we evaluate the role of different inorganic anions (bromine and chlorine). The results show that irrespective to the alkyl chain or the number of substituents, the transformation involved an attack to the alkyl chain, proceeded through the formation of harmless compounds and the mineralization was easily achieved within 4 h. Nitrogen was mainly released as ammonium ion. When introducing a cyano group, the extent of nitrate ions and the number of possible transformation route increased. Conversely, the type of inorganic ion deeply affected the transformation pathways and the extent of mineralization. Actually, in the presence of bromide as anion, IL was only partially mineralized and the formation of highly persistent transformation products occurred. (C) 2017 Elsevier B.V. All rights reserved
Ligand-based design, in silico ADME-Tox filtering, synthesis and biological evaluation to discover new soluble 1,4-DHP-based CFTR activators
Full text linkThe altered gating of the mutant CFTR chloride channel cystic fibrosis (CF) may be corrected by small molecules called potentiators. We present a molecular scale simulation system for the discovery of ΔF508-CFTR soluble potentiators. Results report the design, ADME-Tox prediction, synthesis, solubility determination and in vitro biological evaluation of two 1,4-dihydropyridines (DHPs). Compound 1 shows a promising ADME-Tox profile and good potency
Study of the Photoinduced Fate of Selected Contaminants in Surface Waters by HPLC‐HRMS
Full text linkRationale: Photoinduced transformation of contaminants of emerging concern (CECs) can occur in aquatic environment and could lead to the formation of transformation products (TPs) of greater concern than the parent compounds. For such, the fate of epoxiconazole, hymecromone, and coumarin in water was investigated by simulating photoinduced abiotic transformations to assess the toxicity of their TPs and which CEC may be of greatest concern. Methods: Heterogeneous photocatalysis with TiO2 and direct photolysis of selected CECs were exploited to simulate their TPs. The TPs were assessed by means of HPLC coupled with an Orbitrap MS analyser in ESI positive mode, while their toxicity was evaluated through a Vibrio fischeri bioluminescence assay, and ECOSAR tool. Results: The formation of numerous TPs via different photoinduced pathways was noticed (27 for epoxiconazole, 6 for coumarin, and 8 for hymecromone, some of which are in the form of structural isomers). Toxicity assessment via V. fischeri assay showed that, unlike coumarin species, epoxiconazole transformation proceeds through the formation of toxic compounds. By means of ECOSAR software, the formation of predominant more noxious TPs of epoxiconazole was proved than the parent compound for both acute and chronic toxicities. Instead, most TPs of coumarin and hymecromone generally exhibited "harmful" and "toxic" levels of acute and chronic toxicities. Conclusions: A probable structural identification was assigned to the monitored TPs via HPLC-HRMS to recognize the several transformation pathways, of which the hydroxylation reaction was predominant, and which compound may be more hazardous in the aquatic system due to its TPs. Epoxiconazole transformation brought to potentially toxic TPs, whereas photoinduced degradation of coumarin and hymecromone resulted in less hazardous TPs. The most significant aspect of this work is the ability of this overall approach to identify the formation of photoinduced TPs that are potentially more toxic than the original CEC
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