422 research outputs found

    Searching Ontologies Based on Content: Experiments in the Biomedical Domain

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    As more ontologies become publicly available, finding the "right" ontologies becomes much harder. In this paper, we address the problem of ontology search: finding a collection of ontologies from an ontology repository that are relevant to the user's query. In particular, we look at the case when users search for ontologies relevant to a particular topic (e.g., an ontology about anatomy). Ontologies that are most relevant to such query often do not have the query term in the names of their concepts (e.g., the Foundational Model of Anatomy ontology does not have the term "anatomy" in any of its concepts' names). Thus, we present a new ontology-search technique that helps users in these types of searches. When looking for ontologies on a particular topic (e.g., anatomy), we retrieve from the Web a collection of terms that represent the given domain (e.g., terms such as body, brain, skin, etc. for anatomy). We then use these terms to expand the user query. We evaluate our algorithm on queries for topics in the biomedical domain against a repository of biomedical ontologies. We use the results obtained from experts in the biomedical-ontology domain as the gold standard. Our experiments demonstrate that using our method for query expansion improves retrieval results by a 113%, compared to the tools that search only for the user query terms and consider only class and property names (like Swoogle). We show 43% improvement for the case where not only class and property names but also property values are taken into account

    Knowledge Representation with Ontologies: The Present and Future

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    Recently, we have seen an explosion of interest in ontologies as artifacts to represent human knowledge and as critical components in knowledge management, the semantic Web, business-to-business applications, and several other application areas. Various research communities commonly assume that ontologies are the appropriate modeling structure for representing knowledge. However, little discussion has occurred regarding the actual range of knowledge an ontology can successfully represent

    07132 Report – Towards Interoperability of Biomedical Ontologies

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    The meeting focused on uses of ontologies, with a special focus on spatial ontologies, in addressing the ever increasing needs faced by biology and medicine to cope with ever expanding quantities of data. To provide effective solutions computers need to integrate data deriving from myriad heterogeneous sources by bringing the data together within a single framework. The meeting brought together leaders in the field of what are called "top-level ontologies" to address this issue, and to establish strategies among leaders in the field of biomedical ontology for the creation of interoperable biomedical ontologies which will serve the goal of useful data integration

    Searching biomedical ontologies based on content

    No full text
    As more ontologies become publicly available, finding the 'right' ontologies becomes much harder. In this paper, we introduce a new ontology search technique which is based on corpus analysis. In particular, we look at the case when users search for ontologies relevant to a particular topic (e.g., an ontology about anatomy). Our experiments demonstrate that using our method for query expansion improves retrieval results by a 113%, compared to the tools that search only for the user query terms and consider only class and property names

    Data sharing: more science unions must act

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    A correspondence submitted to Nature as a response to an article authored by Dr. Mark Musen (https://doi.org/10.1038/d41586-022-02820-7)

    Ontologies and the Configuration of Problem-Solving Methods

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    Problem-solving methods model the problem-solving behavior of knowledge-based systems. The PROTÉGÉ-II framework includes a library of problem-solving methods that can be viewed as reusable components. For developers to use these components as building blocks in the construction of methods for new tasks, they must configure the components to fit with each other and with the needs of the new task. As part of this configuration process, developers must relate the ontologies of the generic methods to the ontologies associated with other methods and submethods. We present a model of method configuration that incorporates the use of several ontologies in multiple levels of methods and submethods, and we illustrate the approach by providing examples of the configuration of the board-game method. 1. Introduction Problem-solving methods for knowledge-based systems capture the problem-solving behavior required to performing the system's task (McDermott, 1988). Because certain tasks are common ..

    Melodieen zum Schillerschen Musenalmanach / [Zelter]

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    MELODIEEN ZUM SCHILLERSCHEN MUSENALMANACH / [ZELTER] Melodieen zum Schillerschen Musenalmanach / [Zelter] (1) Cover (1) Titelseite (6) Zauberey der Töne (7) Macht der Liebe (9) Der Besuch (11) Lied (13) Musen und Grazien in der Mark (15) Der Wechsel der Dinge (17) Mignon als Engel verkleidet (21
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