13,925 research outputs found
Voyage pittoresque au Cap Nord : par A. F. Skjöldebrand ... Premier cahier[-quatrieme cahier].
No full textPlates are signed: "Dessiné par A. F. Skjöldebrand", "Dessiné et gravé par A. F. Skjöldebrand", "Gravé par M. R. Heland", "Gravé par J. F. Martin", "Gravé par C. Akrel".Digital reproduction, The National Library of Finland, Centre for Preservation and Digitisation, MikkeliA description of a journey to the North Cape.TravelEuropeanaSkjöldebrand, Anders Fredrik (1757-1834
Triangulating a plane
No full textIn this theoretical paper we consider the problem of accurately triangulating a scene plane. Rather than first triangulating a set of points and then fitting a plane to these points, we try to minimize the back-projection errors as functions of the plane parameters directly. As this is both geometrically and statistically meaningful our method performs better than the standard two step procedure. Furthermore, we show that the error residuals of this formulation are quasiconvex thereby making it very easy to solve using for example standard local optimization methods.Carl Olsson and Anders Erikkso
Water Oxidation by the [Co4O4(OAc)4(py)4]+ Cubium is Initiated by OH– Addition
No full textThe cobalt cubium Co4O4(OAc)4(py)4(ClO4) (1A+) containing the mixed valence [Co4O4]5+ core is shown by multiple spectroscopic methods to react with hydroxide (OH-) but not with water molecules to produce O2. The yield of reaction products is stoichiometric (>99.5%): 4 1A+ + 4 OH- → O2 + 2 H2O + 4 1A. By contrast, the structurally homologous cubium Co4O4(trans-OAc)2(bpy)4(ClO4)3, 1B(ClO4)3 produces no O2. EPR/NMR spectroscopies show clean conversion to cubane 1A during O2 evolution with no Co2+ or Co3O4 side products. Mass spectrometry of the reaction between isotopically labeled µ-16O(bridging-oxo) 1A+ and 18O-bicarbonate/water shows: 1) no exchange of 18O into the bridging oxos of 1A+, and 2) 36O2 is the major product, thus requiring two OH- in the reactive intermediate. DFT calculations of solvated intermediates suggest that addition of two OH- to 1A+ via OH- insertion into Co-OAc bonds is energetically favored, followed by outer-sphere oxidation to intermediate [1A(OH)2]0. The absence of O2 production by cubium 1B3+ indicates the reactive intermediate derived from 1A+ requires gem-1,1-dihydoxo stereochemistry to perform O-O bond formation. Outer-sphere oxidation of this intermediate by 2 eq. 1A+ accounts for the final stoichiometry. Collectively, these results, and recent literature (Faraday Disc., doi:10.1039/C5FD00076A and J.Am.Chem.Soc 2015, 12865-12872) validate the [Co4O4]4+/5+ cubane core as an intrinsic catalyst for oxidation of hydroxide by an inner-sphere mechanism.This document is the Accepted Manuscript version of a Published Work that appeared in final form in Journal of the American Chemical Society, copyright © American Chemical Society after peer review and technical editing by the publisher. To access the final edited and published work see https://dx.doi.org/10.1021/jacs.5b09152Peer reviewe
Chemokine receptor CCR1: A new target for progressive kidney disease
No full textInfiltrating leukocytes are thought to contribute to the progression of kidney disease. Locally produced chemokines guide circulating leukocytes into the kidney, which renders therapeutic blockade of respective chemokine receptors on the leukocyte surface as potential targets for the inhibition of renal leukocyte recruitment. By using mutant mice and specific antagonists, we found that chemokine receptor CCR1 has non-redundant functions for leukocyte adhesion to activated vascular endothelium and for transendothelial diapedesis. Most importantly, CCR1 blockade with a specific small molecule antagonist can improve injury in several types of progressive kidney disease models, even if treatment is initiated in advanced disease states. Identification of new targets may add to the therapeutic options in chronic kidney disease. Copyright (C) 2005 S. Karger AG, Basel
Tissue Microenvironments Define and Get Reinforced by Macrophage Phenotypes in Homeostasis or during Inflammation, Repair and Fibrosis
No full textCurrent macrophage phenotype classifications are based on distinct in vitro culture conditions that do not adequately mirror complex tissue environments. In vivo monocyte progenitors populate all tissues for immune surveillance which supports the maintenance of homeostasis as well as regaining homeostasis after injury. Here we propose to classify macrophage phenotypes according to prototypical tissue environments, e.g. as they occur during homeostasis as well as during the different phases of (dermal) wound healing. In tissue necrosis and/or infection, damage- and/or pathogen-associated molecular patterns induce proinflammatory macrophages by Toll-like receptors or inflammasomes. Such classically activated macrophages contribute to further tissue inflammation and damage. Apoptotic cells and antiinflammatory cytokines dominate in postinflammatory tissues which induce macrophages to produce more antiinflammatory mediators. Similarly, tumor-associated macrophages also confer immunosuppression in tumor stroma. Insufficient parenchymal healing despite abundant growth factors pushes macrophages to gain a profibrotic phenotype and promote fibrocyte recruitment which both enforce tissue scarring. Ischemic scars are largely devoid of cytokines and growth factors so that fibrolytic macrophages that predominantly secrete proteases digest the excess extracellular matrix. Together, macrophages stabilize their surrounding tissue microenvironments by adapting different phenotypes as feed-forward mechanisms to maintain tissue homeostasis or regain it following injury. Furthermore, macrophage heterogeneity in healthy or injured tissues mirrors spatial and temporal differences in microenvironments during the various stages of tissue injury and repair. Copyright (C) 2012 S. Karger AG, Base
Toll-like receptor signaling and SIGIRR in renal fibrosis upon unilateral ureteral obstruction.
No full textInnate immune activation via IL-1R or Toll-like receptors (TLR) contibutes to acute kidney injury but its role in tissue remodeling during chronic kidney disease is unclear. SIGIRR is an inhibitor of TLR-induced cytokine and chemokine expression in intrarenal immune cells, therefore, we hypothesized that Sigirr-deficiency would aggravate postobstructive renal fibrosis. The expression of TLRs as well as endogenous TLR agonists increased within six days after UUO in obstructed compared to unobstructed kidneys while SIGIRR itself was downregulated by day 10. However, lack of SIGIRR did not affect the intrarenal mRNA expression of proinflammatory and profibrotic mediators as well as the numbers of intrarenal macrophages and T cells or morphometric markers of tubular atrophy and interstitial fibrosis. Because SIGIRR is known to block TLR/IL-1R signaling at the level of the intracellular adaptor molecule MyD88 UUO experiments were also performed in mice deficient for either MyD88, TLR2 or TLR9. After UUO there was no significant change of tubular interstitial damage and interstitial fibrosis in neither of these mice compared to wildtype counterparts. Additional in-vitro studies with CD90+ renal fibroblasts revealed that TLR agonists induce the expression of IL-6 and MCP-1/CCL2 but not of TGF-β, collagen-1α or smooth muscle actin. Together, postobstructive renal interstitial fibrosis and tubular atrophy develop independent of SIGIRR, TLR2, TLR9, and MyD88. These data argue against a significant role of these molecules in renal fibrosis
Differential expression analysis for sequence count data
No full text*Motivation:* High-throughput nucleotide sequencing provides quantitative readouts in assays for RNA expression (RNA-Seq), protein-DNA binding (ChIP-Seq) or cell counting (barcode sequencing). Statistical inference of differential signal in such data requires estimation of their variability throughout the dynamic range. When the number of replicates is small, error modelling is needed to achieve statistical power.

*Results:* We propose an error model that uses the negative binomial distribution, with variance and mean linked by local regression, to model the null distribution of the count data. The method controls type-I error and provides good detection power. 

*Availability:* A free open-source R software package, _DESeq_, is available from the Bioconductor project and from "http://www-huber.embl.de/users/anders/DESeq":http://www-huber.embl.de/users/anders/DESeq
Image segmentation with context
No full textAnders P. Eriksson, Carl Olsson & Fredrik Kahlhttp://www.informatik.uni-trier.de/~ley/db/conf/scia/scia2007.htm
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