JOIV : International Journal on Informatics Visualization
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Optimization of General Threshold Value for Preprocessing in Plasmodium Parasites Detection
Get PDFThe high mortality rate of malaria makes it a severe disease that spreads throughout all-region by infected female Anopheles mosquitoes, especially in tropical countries. Accurate early malaria detection is one of the ways to reduce the mortality rate. Microscopy-based malaria examinations are still considered the gold standard. Due to numerous large malaria patients with limited parasitologists, an automated detection system is needed as a second opinion to assist parasitologists. This study proposed an optimization method for finding an optimal global threshold value for pre-processing parasite detection. There were three stages of the proposed method. The first is to pre-process digital microscopic images using color channel selection, contrast stretching, and morphological operation. The second is to find the global threshold value using multiple modified Otsu’s. The third is to determine the optimum global threshold value. In the last stage, predicted threshold values are generated using a pattern recognition approach to determine the optimum global threshold value. The proposed method evaluated 468 microscopic images captured from hundreds of thin smear blood slides. The slides are provided by the Department of Parasitology-UGM and the Eijkman Institute for Molecular Biology. The set image contains 691 malaria parasites in all types and life stages of malaria parasites. The proposed method obtained a sensitivity of 99.6 % and the smallest FPs number compared to without the optimization. It indicates that the proposed method has the potential to be implemented in the initial stages of the malaria detection system
Computational of Concrete Slump Model Based on H2O Deep Learning framework and Bagging to reduce Effects of Noise and Overfitting
Get PDFConcrete mixture design for concrete slump test has many characteristics and mostly noisy. Such data will affect prediction of machine learning. This study aims to experiment on H2O Deep Learning framework and Bagging for noisy data and overfitting avoidance to create the Concrete Slump Model. The data consists of cement, blast furnace slag, fly ash, water, superplasticizer, coarse aggregate, fine aggregate, age, slump, and compressive strength. A primary data for concrete mixed design using the fine aggregate material from Merapi Volcano, the hills of Muntilan, and Kalioro. The coarse aggregate was obtained from Pamotan, Jepara, Semarang, Ungaran, and Mojosongo Boyolali Central Java. The cement was using Gresik and Holcim product and the water was from Tembalang, Semarang. The experiment model with one input layer with 7 neurons, one hidden layer with 20 neurons, and one output layer with 1 neuron using activation function TanH, with parameter L1=1.0E-5, L2=0.0, max weight=10.0, epsilon=1.0E-8, rho=0.99, and epoch=800 is able to achieve RMSE of 2.272. This result shows that after introducing Bagging, the error can be reduced up to 2.5 RMSE approximately (50% lower) compared to the model without Bagging. The manually tested mixture data was used to model evaluation. The result shows that the model was able to achieve RMSE 0.568. Following this study, this model can be used for further research such as creating slump design practicum equipment/ application software
Optimization of the Preprocessing Method for Edge Detection on Overlapping Cells at PAP Smear Images
Get PDFThe complexity of the cell structure and high overlap cause poor image contrast. Complex imaging factors can make automatic visual interpretation more difficult. Segmentation separates a digital image into different parts with homogeneous attributes so that different areas have different features. The challenges faced in performing nucleus segmentation on Pap Smear (PS) images are poor contrast, the presence of neutrophils, and uneven staining of overlapping cells. This research was conducted to improve image quality in identifying the nucleus accurately. The method used is the Polynomial Contrast Enhancement (PCE) model as an approach to preprocessing. This method functions to change the contrast of the Pap smear image against the overlapping cells so that it becomes a significant contrast in detecting the edge of the nucleus object. The detection process uses the Robert and Prewitt edge detection method to test the identification of the nucleus object on 797 PS Repository images of the University of Nusa Mandiri (RepomedUNM). The accuracy result obtained is 86.8%. Comparing Robert's edge detection and Prewitt's edge detection shows that the PCE approach as a filter method can overcome color contrast problems and detect more accurately. The difficulty in detecting the nucleus from the PS image against the overlapping cells can be solved. This method can distinguish overlapping cells from their core during testing, thus becoming a reference in identifying cells with improved accuracy and testing larger data sets
Automatic Summarization of Court Decision Documents over Narcotic Cases Using BERT
Get PDFReviewing court decision documents for references in handling similar cases can be time-consuming. From this perspective, we need a system that can allow the summarization of court decision documents to enable adequate information extraction. This study used 50 court decision documents taken from the official website of the Supreme Court of the Republic of Indonesia, with the cases raised being Narcotics and Psychotropics. The court decision document dataset was divided into two types, court decision documents with the identity of the defendant and court decision documents without the defendant's identity. We used BERT specific to the IndoBERT model to summarize the court decision documents. This study uses four types of IndoBert models: IndoBERT-Base-Phase 1, IndoBERT-Lite-Bas-Phase 1, IndoBERT-Large-Phase 1, and IndoBERT-Lite-Large-Phase 1. This study also uses three types of ratios and ROUGE-N in summarizing court decision documents consisting of ratios of 20%, 30%, and 40% ratios, as well as ROUGE1, ROUGE2, and ROUGE3. The results have found that IndoBERT pre-trained model had a better performance in summarizing court decision documents with or without the defendant's identity with a 40% summarizing ratio. The highest ROUGE score produced by IndoBERT was found in the INDOBERT-LITE-BASE PHASE 1 model with a ROUGE value of 1.00 for documents with the defendant's identity and 0.970 for documents without the defendant's identity at a ratio of 40% in R-1. For future research, it is expected to be able to use other types of Bert models such as IndoBERT Phase-2, LegalBert, etc
An Overview Diversity Framework for Internet of Things (IoT) Forensic Investigation
Get PDFThe increasing utilization of IoT technology in various fields creates opportunities and risks for investigating all cybercrimes. At the same time, many research studies have concentrated on security and forensic investigations to collect digital evidence on IoT devices. However, until now, the IoT platform has not fully evolved to adjust the tools, methods, and procedures of IoT forensic investigations. The main reasons for investigators are the characteristics and infrastructure of IoT devices. For example, device number variations, heterogeneity, distribution of protocols used, data duplication, complexity, limited memory, etc. As a result, resulting is a tough challenge to identify, collect, examine, analyze, and present potential IoT digital evidence for forensic investigative processes effectively and efficiently. Indeed, there is not fully used and adapted international standard for the perfect IoT forensic investigation framework. In the research method, a literature review has been carried out by producing previous research studies that have contributed to further facing challenges. To keep the quality of the literature review, research questions (RQ) were conducted for all studies related to the IoT forensic investigation framework between 2015-2022. This research results highlight and provides a comprehensive overview of the twenty current IoT forensic investigation framework that has been proposed. Then, a summary or contribution is presented focusing on the latest research, grouping the forensic phases, and evaluating essential frameworks in the IoT forensic investigation process to obtain digital evidence. Finally, open research issues are presented for further research in developing IoT forensic investigative framework
Text Classification Using Genetic Programming with Implementation of Map Reduce and Scraping
Get PDFClassification of text documents on online media is a big data problem and requires automation. Text classification accuracy can decrease if there are many ambiguous terms between classes. Hadoop Map Reduce is a parallel processing framework for big data that has been widely used for text processing on big data. The study presented text classification using genetic programming by pre-processing text using Hadoop map-reduce and collecting data using web scraping. Genetic programming is used to perform association rule mining (ARM) before text classification to analyze big data patterns. The data used are articles from science-direct with the three keywords. This study aims to perform text classification with ARM-based data pattern analysis and data collection system through web-scraping, pre-processing using map-reduce, and text classification using genetic programming. Through web scraping, data has been collected by reducing duplicates as much as 17718. Map-reduce has tokenized and stopped-word removal with 36639 terms with 5189 unique terms and 31450 common terms. Evaluation of ARM with different amounts of multi-tree data can produce more and longer rules and better support. The multi-tree also produces more specific rules and better ARM performance than a single tree. Text classification evaluation shows that a single tree produces better accuracy (0.7042) than a decision tree (0.6892), and the lowest is a multi-tree(0.6754). The evaluation also shows that the ARM results are not in line with the classification results, where a multi-tree shows the best result (0.3904) from the decision tree (0.3588), and the lowest is a single tree (0.356)
A Framework for Malay Computational Grammar Formalism based-on Enhanced Pola Grammar
Get PDFIn the era of IR4.0, Natural Language Processing (NLP) is one of the major focuses because text is stored digitally to code the information. Natural language understanding requires a computational grammar for syntax and semantics of the language in question for this information to be manipulated digitally. Many languages around the world have their own computational grammars for processing syntax and semantics. However, when it comes to the Malay language, the researchers have yet to come across a substantial computational grammar that can process Malay syntax and semantics based on a computational theoretical framework that can be applied in systems such as e-commerce. Hence, we intend to propose a formalism framework based on enhanced Pola Grammar with syntactic and semantic features. The objectives of this proposed framework are to create a linguistic computational formalism for the Malay language based on theoretical linguistic; implement templates for Malay words to handle syntax and semantic features in accordance with the enhanced Pola Grammar; and create a Malay Language Parser Algorithm that can be used for digital applications. To accomplish the objectives, the proposed framework will recursively formalise the computational Malay grammar and lexicon using a combination of solid theoretical linguistic foundations such as Dependency Grammar. A Malay parsing algorithm will be developed for the proposed model until the formalised grammar is deemed reliable. The findings of this indigenous Malay parser will help to advance Malay language applications in the digital economy
Using Various Convolutional Neural Network to Detect Pneumonia from Chest X-Ray Images: A Systematic Literature Review
Get PDFPneumonia is one of the world's top causes of mortality, especially for children. Chest X-rays serve an important part in diagnosing pneumonia due to the cost-effectiveness and quick advancement of the technology. Detecting Pneumonia through Chest X-rays (CXR) is a challenging and time-consuming process requiring trained professionals. This issue has been solved by the development of automation technology which is machine learning. Moreover, Deep Learning (DL), a machine learning specification that uses an algorithm that resembles the human brain, can predict more accurately and is now dependable enough to predict pneumonia. As time passes, another Deep Learning improvement has been made to produce a new method called Transfer Learning, that is done by extracting specific layers from some pre-trained network to be used on other datasets, which reduces the training time and improves the model performance. Although numerous algorithms are already available for pneumonia identification, a comprehensive literature evaluation and clinical recommendations are still small in numbers. This research will assist practitioners in choosing some of the best procedures from the recent research, reviewing the available datasets, and comprehending the outcomes gained in this domain. The reviewed papers show that the best score for predicting pneumonia using DL from CXR was 99.4% accuracy. The exceptional techniques and results from the reviewed papers served as great references for future research
Students Demography Clustering Based on The ICFL Program Using K-Means Algorithm
Get PDFIndependent Campus, Freedom to Learn (ICFL) Program is one of the manifestations of student-centered learning. This program can help students reach their full potential by allowing them to pursue their passions and talents. This study aims to see how the segmentation of students participating in the ICFL program is based on demographic data. This research is based on survey responses from students participating in the ICFL program. The method used in this study is input data preparation, pre-processing, data cleansing, and data analysis. The information will be pre-processed before being utilized and evaluated. To help produce better outcomes in data clustering, the K-Means clustering approach is used, which is processed using the Python computer language. The data is clustered using the K-Means clustering approach based on gender characteristics, Grade Point Average (GPA), university entrance selection, ICFL category, and year or semester when participating in ICFL. This study resulted in three clusters with each of its criteria. The dominant gender is found in clusters 2 (100% female) and 3 (100% male). Software Development was the most popular ICFL category among students in cluster 1, accounting for 67%, while Design and Analysis Information Systems was the most popular in clusters 2 and 3. The most dominant ICFL program is found in three clusters. ICFL - Internship program in which at least 40% of participants come from each cluster. The research results are expected to assist stakeholders in evaluating the implementation of the ICFL program. Â
Mobile Implementation of Retinal Image Analysis for Efficient Vessel, Optic Disc, and Lesion Detection
Get PDFSmartphone-based mobile fundus photography is gaining popularity due to the rise of handheld fundus lenses, allowing a portable solution for a mobile-based computer-assisted diagnostic system (CADS). With such a system, professionals can monitor and diagnose numerous retinal diseases, including diabetic retinopathy (DR), glaucoma, age-related macular degeneration, etc. on their smartphone devices. In this study, we proposed a unified CADS tool for smartphone devices that can detect and identify six crucial retinal features utilizing both a filtering approach and a deep learning (DL) approach. These features are retinal blood vessels (RBV), optic discs (OD), hemorrhages (HM), microaneurysm (MA), hard exudates (HE), and soft exudates (SE). Traditional filtering is applied for RBV segmentation using B-COSFIRE and Frangi filter, whereas vessel inpainting and automatic canny edge-based Hough transform are used to localize OD center and radius. The DR lesions (HM, MA, HE, OD segmentation, and SE) are detected using a transfer learning-based Resnet50 backbone and multiclass DL U-net architecture. RBV segmentation achieved 94.94% and 94.44% accuracy in the DRIVE and STARE datasets. OD localization achieved an accuracy of 99.60% in the MESSIDOR dataset. Lastly, the IDRiD dataset is used to train and validate the DR lesions with an overall accuracy of 99.7%, F1-score of 77.4, and mean IoU of 59.2. The smartphone application can perform all the segmentation tasks at once in an average of 30 seconds. Given the availability, it is possible to improve the accuracy of the DL method further by training with more mobile fundus datasets