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Options to Reform the European Union Legislation on GMOs : Post-authorization and Beyond
No full textWe discuss options to reform the EU genetically modified organism (GMO) regulatory framework, make risk assessment and decision-making more consistent with scientific principles, and lay the groundwork for international coherence. In this third of three articles, we focus on labeling and coexistence as well as discuss the political reality and potential ways forward.</p
Zero liquid discharge in soilless greenhouse horticulture : Solutions to save water and the environment while ensuring an optimal production
No full textZero liquid discharge (ZLD) should be the future for soilless production. In The Netherlands emission of nutrients and plant protection products to surface water is the main reason to investigate the potentials of cultivation methods without any discharge. In a few other countries water pollution issues is the main motive, but for a majority water shortage and the increasing competition for water of an acceptable quality is reason for the growing need for water efficient cultivation methods. During four years ZLD was investigated for cucumber (2014, 2017) and sweet pepper (2015, 2016). The primary goal was to reuse all drain water, while maintaining a similar yield and quality as in the traditional growing method with regular discharges. To achieve ZLD all practical reasons for growers to discharge the nutrient solution had to be anticipated before. In the ZLD trials technical and strategic solutions were jointly tested and further developed into an adapted growing strategy without any discharge. A number of factors could be mentioned as main reasons for discharge: sodium in the supply water, discharge of filter rinsing water, unbalances in the nutrient solution, no recirculation of the drainwater in the beginning of the cultivation, no disinfection equipment, too low drain storage capacity, appearance of calamities (technical failures) and the amount of remnant nutrient solution left in slabs and tanks at the end of the cultivation. The next step was demonstrating the technical and strategic solutions in a cultivation. In 2014 and 2015 we showed that ZLD-cultivation in stone wool substrate was possible without loss of yield and quality. In 2016 and 2017 the more challenging coir substrate was used to investigate the influence of buffering and sodium accumulation. It appeared that ZLD was possible without loss of production or quality. Appearing problems were more in the field of management of water flows than lack of technical equipment. Special care should come for technical failures of equipment, mostly not enough storage capacity is available.</p
Fecal Carriage of Extended-Spectrum-β-Lactamase/AmpC-Producing Escherichia coli in Horses
No full textA nationwide study on the occurrence of extended-spectrum β-lactamase (ESBL)/AmpC in nonhospitalized horses in the Netherlands was performed. Molecular characterization was done, and questionnaires were analyzed to identify factors associated with carriage. In total, 796 horse owners were approached; 281 of these submitted a fecal sample from their horse(s), resulting in 362 samples. All samples were cultured qualitatively in Luria-Bertani (LB) broth and subsequently on MacConkey agar, both supplemented with 1 mg/liter cefotaxime (LB+ and MC+). Positive samples were subsequently cultured quantitatively on MC+. Initial extended-spectrum-β-lactamase (ESBL)/AmpC screening was performed by PCR, followed by whole-genome sequencing on selected strains. Associations between ESBL/AmpC carriage and questionnaire items were analyzed using a univariate generalized estimating equation (GEE) regression analysis, followed by a multiple GEE model for relevant factors. In total, 39 of 362 samples (11%) were determined to be positive for ESBL/AmpC. blaCTX-M-1-carrying isolates were obtained from 77% of positive samples (n = 30). Other ESBL/AmpC genes observed included blaCTX-M-2, blaCTX-M-14, blaCTX-M-15, blaCTX-M-32, blaSHV-12, blaCMY-2, and blaACT-10 A high association between the presence of blaCTX-M-1 and IncHI1 plasmids was observed (46% of samples; n = 18). Based on core genome analysis (n = 48 isolates), six Escherichia coli clusters were identified, three of which represented 80% of the isolates. A negative association between ESBL/AmpC carriage and horses being in contact with other horses at a different site was observed. The presence of a dog on the premises and housing in a more densely human-populated region were positively associated.IMPORTANCE Extended-spectrum β-lactamases (ESBLs) are widespread in human and animal populations and in the environment. Many different ESBL variants exist. The dissemination of ESBLs within and between populations and the environment is also largely influenced by genetic mobile elements (e.g., plasmids) that facilitate spread of these ESBLs. In order to identify potential attributable ESBL sources for, e.g., the human population, it is important to identify the different ESBL variants, the bacteria carrying them, and the potential risk factors for ESBL carriage from other potential sources. This nationwide study focuses on ESBL carriage in the open horse population and investigated the molecular characteristics, geographical distribution throughout the Netherlands, and potential risk factors for fecal ESBL carriage in horses. These data can be used for future attribution studies in order to reduce potential transmission of ESBL-producing bacteria between sources.</p
Encapsulation Using Plant Proteins : Thermodynamics and Kinetics of Wetting for Simple Zein Coacervates
No full textTraditionally, complex coacervates of oppositely charged biopolymers have been used to form coatings around oil droplets for encapsulation of oil-soluble payloads. However, many proteins can form coacervates by themselves under certain conditions. Here, we revisit the well-known simple coacervates of prolamins such as zein in mixed solvents to explore whether they can be used for plant-based encapsulation systems. We show that, for zein in mixed water/propylene glycol (PG) solvents, we can encapsulate limonene droplets but only under specific conditions. We illustrate that this limitation is due to the very different physical properties of the simple zein coacervates as compared to those of the more extensively studied complex coacervates. Droplets of simple coacervates of zein can carry a significant net charge, whereas complex coacervates are usually close to being charge-balanced. In particular, we demonstrate that the spreading of zein coacervates at the interface of the droplets is thermodynamically favorable due to their extremely low interfacial tensions in both the dispersed (∼0.24 mN/m) and oil phases (∼0.68 mN/m), but the kinetics of coacervate droplet deposition and the interactions among coacervate droplets that oppose coacervate droplet coalescence are highly pH-dependent, leading to a sharp pH optimum (around pH 8) for capsule formation.</p
Response of maize (Zea mays L.) to potassium nano-silica application under drought stress
No full textTo investigate the influence of potassium nano-silica (PNS) on maize plant under drought stress including non-stress (NS), moderate drought stress (MDS) and severe drought stress (SDS), a factorial experiment was conducted with completely randomized blocks with three replications. Drought stress decreased the concentrations in the shoot of phosphor (P), calcium (Ca), iron (Fe), zinc (Zn), manganese (Mn) and silica (Si) and nitrogen (N), P, Ca, Fe, Zn, copper (Cu), Mn and Si concentrations of seed. There was an increase in the concentration in the N seed and shoot potassium (K) concentration under drought stress. It was observed that applying PNS increased nutrient absorption. The highest concentration of N in the seed was obtained at 100 ppm PNS. The highest concentrations of seed K and N, Cu, Mn and Si in the shoot were found when 200 ppm of PNS was applied. Applying PNS had no significant effect on the concentrations of P, Ca, sodium (Na) and Cu in the seed, and of Ca and Na in the shoot. These findings demonstrate that the application of PNS can limit the negative effects of drought stress and improve plant’s resistance against drought stress.</p
Endoplasmic reticulum-associated degradation regulates mitochondrial dynamics in brown adipocytes
No full textThe endoplasmic reticulum (ER) engages mitochondria at specialized ER domains known as mitochondria-associated membranes (MAMs). Here, we used three-dimensional high-resolution imaging to investigate the formation of pleomorphic “megamitochondria” with altered MAMs in brown adipocytes lacking the Sel1L-Hrd1 protein complex of ER-associated protein degradation (ERAD). Mice with ERAD deficiency in brown adipocytes were cold sensitive and exhibited mitochondrial dysfunction. ERAD deficiency affected ER-mitochondria contacts and mitochondrial dynamics, at least in part, by regulating the turnover of the MAM protein, sigma receptor 1 (SigmaR1). Thus, our study provides molecular insights into ER-mitochondrial cross-talk and expands our understanding of the physiological importance of Sel1L-Hrd1 ERAD.</p
Is litter decomposition enhanced in species mixtures? A meta-analysis
No full textLitter decomposition is a key process in the carbon balance of soils. Commonly, plant litters occur in mixtures where the species differ in quality traits such as the nutrient concentration and organic carbon quality. Many studies explored if mixing litters retards or speeds up litter decomposition compared to species decomposing alone, with varying results. To identify consistent trends with an overarching quantitative synthesis, we test in a meta-analysis whether on average across studies, the mass loss of mixed litters of two plant species is faster than the average mass loss of single litters. We hypothesise that larger trait divergence of the litter quality of the species in a mixture results in a faster mass loss of the mixture than expected based on the single species. Furthermore we hypothesise that part of the variation in litter mixture mass loss can be explained by experimental design and environmental factors. Explanatory variables used were chemical litter trait dissimilarity in the C, N, P, lignin, cellulose, phenolics concentration as well as soil properties, ecosystem, climate, the duration of litter decomposition and the experimental design. Interactions were studied if supported by mechanistic hypotheses. In the majority of studies and on average, we found that the mass loss of mixed litters is equal to the weighted average of the mass loss of the constituent single litters. None of the hypothesised explanatory variables was consistently associated with litter mixture effects on the mass loss and explained variation in mass loss of significant models was invariably only a few percent of all variation. While further data exploration might elucidate further, interactive, patterns, many of these could not be explored due to lacking data. This meta-analysis therefore refutes the notion that mixing litters in general enhances rates of decomposition. We conclude that the effects of litter mixing are in many cases predictable from the decomposition rates of the individual species. According to our results, any interactive effects (positive or negative) between litter species are contextual, and cannot be generalized and predicted beyond the context in which the results were obtained.</p
Experimental bottom trawling finds resilience in large-bodied infauna but vulnerability for epifauna and juveniles in the Frisian Front
No full textIn this study, we analysed the benthic effects of two in situ fisheries disturbance experiments using a combination of side-scan sonar, high definition underwater video, sediment profile imagery, and box core sampling techniques after conventional beam trawling and box core sampling after electric pulse trawling in a southern North Sea habitat. Acoustic and optical methods visualised the morphological changes induced by experimental beam trawling, showing the flattening and homogenisation of surface sediments. Video transects found a 94% decrease in epibenthos in beam trawled sediments compared to an untrawled control site and a 74% decrease in untrawled sediments of the same transect. Box core samples taken 5.5 h, 29 h and 75 h after trawling detected a downward trend in infaunal densities and species richness that continued after the initial impact with small-bodied and juvenile taxa being especially prone to depletion. Data from shallow sediment samples showed trawl resilience in large mud shrimps and evidence of their upward movement towards the sediment surface after disturbance. Both trawl gears induced significant changes to infaunal communities, with no differential effect between the two gears. Our results suggest that in the Frisian Front, trawling may favour the survival of deep burrowers while removing surficial macrofauna.</p
Climbing Escher’s stairs: A way to approximate stability landscapes in multidimensional systems
No full textStability landscapes are useful for understanding the properties of dynamical systems. These landscapes can be calculated from the system’s dynamical equations using the physical concept of scalar potential. Unfortunately, it is well known that for most systems with two or more state variables such potentials do not exist. Here we use an analogy with art to provide an accessible explanation of why this happens and briefly review some of the possible alternatives. Additionally, we introduce a novel and simple computational tool that implements one of those solutions: the decomposition of the differential equations into a gradient term, that has an associated potential, and a non-gradient term, that lacks it. In regions of the state space where the magnitude of the non-gradient term is small compared to the gradient part, we use the gradient term to approximate the potential as quasi-potential. The non-gradient to gradient ratio can be used to estimate the local error introduced by our approximation. Both the algorithm and a ready-to-use implementation in the form of an R package are provided
Zoektocht naar vervangers dierlijk eiwit : Alternatieven voor soja
No full textSteeds meer consumenten stappen, mede uit duurzaamheidsoverwegingen, over naar een dieet met minder vlees. De markt voor vleesvervangers groeit in volume, kwaliteit en variatie. Het overgrote deel van deze vleesalternatieven bestaat uit soja, vaak in combinatie met gluten. Maar soja als vleesvervanger is niet zaligmakend. Wat zijn goede alternatieven