Jurnal Fitopatologi Indonesia
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Khamir Antagonis untuk Pengendalian Penyakit Antraknosa pada Buah Avokad Selama Penyimpanan
Anthracnose caused by Colletotrichum gloeosporioides is an important disease in avocado fruit during storage. An effective, cheap, and safe control method is necessary as an alternative to subtitute the use of fungicides in postharvest disease control. This research aimed to identify yeast antagonist from avocados that are effective in controlling anthracnose disease on avocado fruit. Research was started with isolation of C. gloeosporioides and yeast from avocado fruit, followed by in vivo bioassay, antibiosis assay, and chitinolitic activity assay. In vivo bioassay was done by dipping avocado fruit on yeast cell suspension. As many as 23 yeasts isolates was obtained from avocado fruits. Eight yeast isolates (A28, A32, A33, A34, A35, A36, A37, A38) showed very effective for inhibiting anthracnose disease in avocado fruit at concentration of 106 mL-1 and 107 mL-1. However, only four isolates were chosen for further characterization based on morphological and molecular identification. Two species of yeast was identified as Pichia anomala, i.e. isolates A33 and A37 and Candida intermedia, i.e. isolates A35 and A36
Aplikasi Formula Cair Pseudomonas fluorescens P60 untuk Menekan Penyakit Virus Cabai Merah
Viral diseases of chilli pepper are difficult to control, therefore the use of Pseudomonas fluorescens P60 should be evaluated. The aims of this research were to determine the influence of liquid formula of P. fluorescens P60 on virod disease and on growth and yield of chili pepper. Randomized block design (RBD) experiment was composed of 7 treatments and 4 replicates, i.e., control, insecticide applicaton, P. fluorescens P60 application by seedling drenching and spraying for 1, 2, 3, 5, and 7 times. The result showed that 5 times application of P. fluorescens P60 by drenching and spraying was able to suppress viral disease and reduce disease intensity by to 73.37%, increasing density level of P. fluorescens P60 to 9.50 x 1011 and increase phenolic compounds (saponin, tannin and glycoside). The same treatment could increase plant height 23.7%, root lenght 6.44%, plant dry weight 66.68%, root dry weight 23.59%, and yield weight 53.16%
Respons Lima Varietas Kacang Panjang terhadap Bean common mosaic virus
Incidence of yellow mosaic disease on yard long bean occurred widely in some areas in West and Central Java in 2008–2009. The causal agent of this disease is Bean common mosaic virus (BCMV) which can be transmitted through seed and aphids. Research was conducted to determine response of five varieties of yard long bean (Vigna sinensis), i.e. Parade, New Jaliteng, Long Silk, Super Sainan, and Pilar to BCMV infection. Yard long bean plants was inoculated by BCMV mechanically, followed by observation of disease incidence and severity, incubation period, flowering time, and yield. All five varieties of yard long bean showed susceptible response to BCMV infection. Incubation period was 6–16 days, disease incidence was 90–100%, and disease severity was 49.1–69.7%. BCMV infection caused severe symptoms of leaf malformation and plant stunting. Flowering time was delayed 2–5 days on infected plants and yield was decreased up to 46.6%. Breeding program to develop resistance varieties to BCMV is necessary
Deteksi dan Identifikasi Virus pada Umbi Bawang Merah
Shallot is an important horticultural crop in Indonesia. One of it’s production constraint is viral disease. Dispersal of viruses on shallots may occurre through shallots bulb trading. However, there is not much information regarding viruses infecting shallot bulbs. Laboratory study was conducted to detect and identify viruses associated with shallot. Random sampling was done for several varieties of shallots (Jawa, Biru, Nganjuk, and Brebes varieties) collected from Bantul Districs. Virus detection and identification was based on RT-PCR using specific primer of OYDV, SYSV, SLV, and ShVX followed by sequencing of the nucleotides. RT-PCR was only successfully amplified Shallot yellow stripe virus (SYSV) with size ~749 bp, while other viruses were not detected. Disease incidence of SYSV on Java and Brebes varieties were 60% and 53.3% respectively. Nucleotide sequences of SYSV CP gene showed the highest homology to SYSV from China and South Korea.Key words: RT-PCR, sequencing nucleotides, Shallot yellow stripe viru
Penggunaan Bakteriofag untuk Kit Detektor Patogen Hawar Bakteri Kedelai
Bacterial blight disease on soybean caused by Pseudomonas syringae pv. glycinea is an important factor causing yield loss in Indonesia. Bacteriophage isolated from irrigation water around the soybean field can be used as indicator for the presence of phytopathogenic bacteria. The objectives of this research was to obtain suitable composition of detector materials to detect P. syringae pv. glycinea using bacteriophage. Composition of detector kit contains of nutrient broth medium with 0.1% of bromothymol blue, 10 g talk and 1 g CMC which will be rubbed on to the detector paper and caused green colour development (pH ± 7) when the paper was dipped on to bacteria suspension, added by a drop of bacteriophage suspension and incubated for 24 hour, the colour will be changed. Yellow color indicated growth activity of P. syringae pv. glycinea where as blue colour indicated suppression of P. syringae pv. glycinea
Tomato yellow leaf curl Kanchanaburi virus Penyebab Penyakit Mosaik Kuning pada Tanaman Terung di Jawa
Yellow and yellow mosaic symptoms was observed on eggplant (Solanum melongena) around Bogor, Bandung, Pati, Rembang, and Bantul during a survey in early 2013. Polymerase chain reaction based detection was carried out using total DNA isolated from symptomatic leaf samples and a pair of Begomovirus-universal primers, SPG1/SPG2. The expected size (~900 bp) amplicon was detected from all five symptomatic samples, indicating the presence of Begomovirus infection. Each amplicon was sequenced followed by basic local alignment search tool analysis. It was revealed that the sequence had the highest homology (98.8%) with Tomato yellow leaf curl Kanchanaburi virus (TYLCKaV) sequence. This is the first report on TYLCKaV infection on eggplant in Indonesia
Sensitivitas Metode Serologi dan Polymerase Chain Reaction untuk Mendeteksi Bean Common Mosaic Potyvirus pada Kacang Panjang
Mosaic disease in yard long bean is caused by Bean common mosaic potyvirus (BCMV) and has been reported to affect yield. Common method to detect infection of BCMV involves serological assay and polymerase chain reaction (PCR). The aims of this research is to assess the sensitivity of three methods, i.e. Indirect Enzym-Linked Immunosorbent Assay (I-ELISA), Dot Immunobinding Assay (DIBA), and reverse transcription (RT)-PCR as detection method for BCMV infection in yard long bean. Sensitivity level of the methods was evaluated by diluting plant extract and antisera for I-ELISA and DIBA, and cDNA as template in RT-PCR. Virus isolate from Cirebon was maintained in yard long bean in screenhouse and used for the assessment. Absorbance value of ELISA showed that dilution end point for I-ELISA was reached at 10-3 and 10-2 of plant extract and antisera dilution, respectively. Positive infection was still detected using DIBA when the plant extract was diluted up to 10-5 based on development of color intensity on nitrocellulose membrane. Specific viral DNA fragment was still amplified when cDNA was diluted up to 10-4, indicated higher sensitivity level of RT-PCR method
Penapisan dan Identifikasi Bakteri Agens Biokontrol Penyakit Layu Fusarium Hasil Isolasi dari Rizosfer Pisang
Banana wilt disease caused by Fusarium oxysporum f.sp.cubense is considered as one of the most destructive diseases on banana plants in the tropical region. Biological control agents (BCA’s) have become a promising solution to overcome this disease. The objective of this study was to find potential BCA’s for wilt disease of banana plants. Bacteria and actinomycetes were isolated from banana’s rhizosphere in Lampung and Cianjur. As much as 64 actinomycetes and 142 bacteria isolates were obtained. Antagonistic test against F. oxysporum f. sp. cubense of those isolates showed that 21 bacteria and 10 actinomycete isolates have abilities to inhibit F. oxysporum f. sp. cubense. Actinomycetes showed relatively higher inhibition against F. oxysporum f. sp. cubense compared to bacteria. Isolates which have positive antagonistic activities against F. oxysporum f. sp. cubense were then tested for their protease, chitinase, and selulase activities qualitatively on specific medium. All actinomycetes which were tested had chitinase enzyme activities, while only 5 bacterial isolates had chitinase activities. On the other hand, 13 bacterial isolates showed protease activities and only 1 actinomycete showed protease activity. Two bacterial isolates (L.II.4.ND and L.A.I-5.DW) and 3 actinomycetes (L.A.I.DW, L.3.1.DW and Ci.I.A5.DW) which showed high inhibition against F. oxysporum f. sp. cubense and lyses enzymes activities were identified based on 16S rRNA genes. Analysis based on GenBank data, those isolates have 99% homology to Klebsiella pneumonia (L.II.4.ND), Burkholderia sp. (L.A.I-5.DW), Streptomyces sp. (L.A.I.DW), Streptomyces sp. (L.3.1.DW) and Streptomyces sp. (Ci.I.A5.DW)
Kompatibilitas Bacillus spp. dan Aktinomiset sebagai Agens Hayati Xanthomonas oryzae pv. oryzae dan Pemacu Pertumbuhan Padi
Bacterial leaf blight caused by Xanthomonas oryzae pv. oryzae is an important disease on rice. The bacteria is seed borne and survives for a long time in the seed. Some beneficial microbes, such as Bacillus spp. and actinomycetes has been reported as biocontrol agents for the disease. The objectives of the research was to select isolates of actinomycetes as biocontrol agents for X. oryzae pv. oryzae which is also compatible with Bacillus spp. by seed application. Actinomycetes isolated from soil was selected using dual culture method on agar medium and on growing medium composing of mixture of soil and manure (1:1 w/w). Three isolates out of 16 isolated actinomycetes, i.e. APS 7, APS 9, and APS 12 showed antagonistic activities against X. oryzae pv. oryzae and compatible with Bacillus spp. Both Bacillus spp. and actinomycetes was applied to rice seed variety Ciherang using seed coating method in formulation containing rice husk. Actinomycetes treatment using APS 9 isolate was able to suppress population of X. oryzae pv. oryzae by (88.89%) and induce crown growth by 36.13%. The highest percentage of seedling emergence was obtained on combination treatment of B12 + APS 7 and single treatment of APS 9, i.e. 83.33% and 79%, respectively and significantly different with those of control treatment (56.67%). Application of Bacillus spp. and actinomycetes on rice seed was able to suppress population of X. oryzae pv. oryzae on rice seedling and induce rice growth
Aplikasi Formula Campuran Rizobakteri untuk Pengendalian Penyakit Busuk Akar Rhizoctonia dan Peningkatan Hasil Kedelai di Tanah Ultisol
Rhizoctonia root rot disease caused by Rhizoctonia solani is one of the most important disease in soybean area, including at ultisol land in Southeast Sulawesi. Rhizobacteria application is one alternative method to control this pathogen. The aim of this experiment was to study of rhizobacteria indigenous formulation to control of Rhizoctonia root rot disease and increase soybean yield in Ultisol soil. A complete randomized design with seven treatments was used in this experiment. The treatments were (A) rhizobacteria formulation for seed treatment, (B) rhizobacteria formulation for seed treatment and repeated at 2 weeks after planting, (C) rhizobacteria formulation for seed treatment, repeated at 2 and 4 weeks after planting, (D) rhizobacteria formulation for seed treatment and fungicide applied at 2 weeks after planting, (E) fungicide seed treatment, and repeated at 2 weeks after planting, (F) fungicide seed treatment, and repeated at 2 and 4 weeks after planting, and control (without rhizobacteria and fungicides). All treatments were inoculated by R. solani and replicated three times. The results showed that rhizobacteria seed treatment and repeated at 2 and 4 weeks after planting was the most effective treatment to control Rhizoctonia root rot disease, and increase plant height and leaf number up to 119% and 170%, respectively, and increased the yield of soybean up to 1870% in ultisol soil compared to plant with control treatment.