Portail HAL du Collège de France
Not a member yet
22122 research outputs found
Sort by
Marangoni-like tissue flows enhance symmetry breaking of embryonic organoids
No full textInternational audienceDuring early development of multi-cellular animals, cells self-organize to set up the body axes, such as the primary head-to-tail axis, based on which the later body plan is defined. Several signaling pathways are known to control body axis formation. Here, we show, however, that tissue mechanics plays an important role during this process. We focus on the emergence of a primary axis in initially spherical aggregates of mouse embryonic stem cells, which mirrors events in the early mouse embryo. These aggregates break rotational symmetry to establish an axial organization with domains of different expression profiles, e.g. of the transcription factor T/Bra and the adhesion molecule E-cadherin. Combining quantitative microscopy and physical modeling, we identify large-scale tissue flows with a recirculation component and demonstrate that they significantly contribute to symmetry breaking. We show that the recirculating flows are explained by a difference in tissue surface tension across domains, akin to Marangoni flows, which we further confirm by aggregate fusion experiments. Our work highlights that body axis formation is not only driven by biochemical processes, but that it can also be amplified by tissue flows. We expect this type of amplification to operate in many other organoid and in-vivo systems
Mapping and modeling the semantic space of math concepts
No full textInternational audienceMathematics is an underexplored domain of human cognition. While many studies have focused on subsets of math concepts such as numbers, fractions, or geometric shapes, few have ventured beyond these elementary domains. Here, we attempted to map out the full space of math concepts and to answer two specific questions: can distributed semantic models, such a GloVe, provide a satisfactory fit to human semantic judgements in mathematics? And how does this fit vary with education? We first analyzed all of the French and English Wikipedia pages with math contents, and used a semi-automatic procedure to extract the 1000 most frequent math terms in both languages. In a second step, we collected extensive behavioral judgements of familiarity and semantic similarity between them. About half of the variance in human similarity judgements was explained by vector embeddings that attempt to capture latent semantic structures based on cooccurence statistics. Participants' self-reported level of education modulated familiarity and similarity, allowing us to create a partial hierarchy among high-level math concepts. Our results converge onto the proposal of a map of math space, organized as a database of math terms with information about their frequency, familiarity, grade of acquisition, and entanglement with other concepts
Some Reflections on the Mirror from the Tomb of Marquis of Haihun (59 BCE): Iconographic Choices and Textual Sources
No full textInternational audienc
Logarithmic angle-dependent gauge transformations at null infinity
No full textInternational audienceLogarithmic angle-dependent gauge transformations are symmetries of electromagnetism that are canonically conjugate to the standard angle-dependent transformations. They were exhibited a few years ago at spatial infinity. In this paper, we derive their explicit form at null infinity. We also derive the expression there of the associated "conserved" surface integrals. To that end, we provide a comprehensive analysis of the behaviour of the electromagnetic vector potential in the vicinity of null infinity for generic initial conditions given on a Cauchy hypersurface. This behaviour is given by a polylogarithmic expansion involving both gauge-invariant logarithmic terms also present in the field strengths and gauge-variant logarithmic terms with physical content, which we identify. We show on which explicit terms, and how, do the logarithmic angle-dependent gauge transformations act. Other results of this paper are a derivation of the matching conditions for the Goldstone boson and for the conserved charges of the angle-dependent asymptotic symmetries, as well as a clarification of a misconception concerning the non-existence of these angle-dependent charges in the presence of logarithms at null infinity. We also briefly comment on higher spacetime dimensions
Porphyritic olivine chondrules with enstatite chondrite isotopic composition as a main building block of Earth
No full textInternational audienceThe nature and origin of the Earth's building blocks remain intensely debated. While enstatite chondrites (ECs) were formed from a reservoir with an isotopic composition of major elements similar to that of the Earth, they nevertheless exhibit significant chemical differences. Specifically, the Earth is enriched in refractory elements and depleted in moderately volatile elements compared to ECs. By reevaluating the budget of rare earth elements in enstatite chondrites, we show that EC chondrule precursors correspond to early condensates formed in the inner protoplanetary disk. Taking condensation models into account, we propose that these condensates consist primarily of olivine, which was subsequently transformed into enstatite due to gas-melt interactions during chondrule formation. We show that the accretion of the Earth from olivine-rich EC chondrules, which underwent shorter gas-melt interactions compared to those present in ECs, satisfactorily reproduces its chemical ratios (i.e., Mg/Si, Al/Si, Na/Si, Ti/Si, Ca/Si) and oxygen isotopic composition. This difference in the duration of gas-melt interactions in the protoplanetary disk had thus major consequences on the chemical composition of the planetesimals accreted by planetary embryos. Our approach thus addresses the chemical divergence between Earth and ECs without altering their isotopic compositions, while also supporting planet formation models involving large embryos formed in the inner protoplanetary disk.</div
Strain phylogroup and environmental constraints shape Escherichia coli dynamics and diversity over a 20-year human gut time series
No full textInternational audienceEscherichia coli is an increasingly antibiotic-resistant opportunistic pathogen. Few data are available on its ecological and evolutionary dynamics in its primary commensal niche, the vertebrate gut. Using Illumina and/or Nanopore technologies, we sequenced whole genomes of 210 E. coli isolates from 22 stools sampled during a 20-year period from a healthy man (ED) living in Paris, France. All phylogroups, except C, were represented, with a predominance of B2 (34.3%), followed by A and F (19% each) phylogroups. Thirty-five clones were identified based on their haplogroup and pairwise genomic single nucleotide polymorphism distance and classified in three phenotypes according to their abundance and residence time: 25 sub-dominant/transient (52 isolates), five dominant/transient (48 isolates) and five dominant/resident (110 isolates). Four over five dominant/resident clones belonged to B2 and closely related F phylogroups, whereas sub-dominant/transient clones belonged mainly to B1, A and D phylogroups. The long residence times of B2 clones seemed to be counterbalanced by lower colonization abilities. Clones with larger within-host frequency persisted for longer. By comparing ED strain genomes to a collection of commensal E. coli genomes from 359 French individuals, we identified ED-specific genomic properties including an enrichment in genes involved in a metabolic pathway (mhp cluster) and the presence of a very rare antiviral defense island. The E. coli colonization within the gut microbiota was shaped by both the intrinsic properties of the strain lineages, in particular longer residence of phylogroup B2, and the environmental constraints such as diet or phages
Structure, function and formation of the amniote skin pattern
No full textInternational audienceFrom feather and hair dotted arrays to pigmented stripes and spots, the spatial distribution of skin appendages and colouration often forms visible ornaments crucial for fitness in the coat of birds and mammals. These geometrical motifs are extremely diverse in nature. Yet, phenotypic surveys evidenced common themes in variation: the orientation, appendage-specificity or pigmentation of a given region may be conserved across groups or species. Here, we review naturalist observations of natural variation in the anatomy and ecological function of the skin pattern in amniotes. We then describe several decades of genetics, mathematical modelling and experimental embryology work aiming at understanding the molecular and morphogenetic mechanisms responsible for pattern formation. We discuss how these studies provided evidence that the morphological trends and differences representative of the phenotypic landscape of skin patterns in wild amniote species is rooted in the mechanisms controlling the production of distinct compartments in the embryonic skin
Du nouveau sur l'archéologie népalaise
No full textInterview on the latest fieldwork of the Franco-Nepalese Archaeological Mission in MustangEntretien sur les derniers terrain de la Mission Archéologique Franco-Népalaise au Mustan
Tubulin glutamylation regulates axon guidance via the selective tuning of microtubule-severing enzymes
No full textInternational audienceThe microtubule cytoskeleton is a major driving force of neuronal circuit development. Fine-tuned remodelling of this network by selective activation of microtubule-regulating proteins, including microtubule-severing enzymes, has emerged as a central process in neuronal wiring. Tubulin posttranslational modifications control both microtubule properties and the activities of their interacting proteins. However, whether and how tubulin posttranslational modifications may contribute to neuronal connectivity has not yet been addressed. Here we show that the microtubule-severing proteins p60-katanin and spastin play specific roles in axon guidance during zebrafish embryogenesis and identify a key role for tubulin polyglutamylation in their functional specificity. Furthermore, our work reveals that polyglutamylases with undistinguishable activities in vitro, TTLL6 and TTLL11, play exclusive roles in motor circuit wiring by selectively tuning p60-katanin- and spastin-driven motor axon guidance. We confirm the selectivity of TTLL11 towards spastin regulation in mouse cortical neurons and establish its relevance in preventing axonal degeneration triggered by spastin haploinsufficiency. Our work thus provides mechanistic insight into the control of microtubule-driven neuronal development and homeostasis and opens new avenues for developing therapeutic strategies in spastin-associated hereditary spastic paraplegia