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Cracticus_tibicen
Shotgun data: all merged NextSeq reads for Cracticus tibicen, unfiltered. Unmerged reads are available upon request from the corresponding author
Data from: Annual environmental variation influences host tolerance to parasites
When confronted with a parasite or pathogen, hosts can defend themselves by resisting or tolerating the attack. While resistance can be diminished when resources are limited, it is unclear how robust tolerance is to changes in environmental conditions. Here we investigate the sensitivity of tolerance in a single host population living in a highly variable environment. We manipulated the abundance of an invasive parasitic fly, Philornis downsi, in nests of Galápagos mockingbirds (Mimus parvulus) over four field seasons and measured host fitness in response to parasitism. Mockingbird tolerance to P. downsi varied significantly among years and decreased when rainfall was limited. Video observations indicate that parental provisioning of nestlings appears key to tolerance: in drought years, mockingbirds likely do not have sufficient resources to compensate for the effects of P. downsi. These results indicate that host tolerance is a labile trait and suggest that environmental variation plays a major role in mediating the consequences of host-parasite interactions
GCMS results
Contain of GCMS results of Control (without dye) and Treatments using dye (in Static and Shaking culture
data to analyze association of SNPs with CSP and ISC
These data are for the candidate genes. Each SNP is listed without any identifying information and only variable sites are provided. A code relating each SNP number to the particular gene is contained in the fasta zip file with full alignments for each locus
Control and Candidate gene fasta files
Each fasta file contains the full CDS aligned for each genotype. Heterozygous sites are marked with ambiguity characters or "-". The two text files relate the SNP numbers used in the analysis with the FBgn numbers for each locu
Data from: Beyond preference and performance: host plant selection by monarch butterflies, Danaus plexippus
The connection between adult preferences and offspring performance is long-standing issue in understanding the evolutionary and ecological forces that dictate host associations and specialization in herbivorous insects. Indeed, decisions made by females about where to lay their eggs have direct consequences for fitness and are influenced by interacting factors including offspring performance, defence, and competition. Nonetheless, in addition to these attributes of the offspring, a female’s choices may be affected by her own prior experience. Here we examined oviposition preference, larval performance, and the role of learning in the monarch butterfly, Danaus plexippus, which encounters diverse milkweed host species across its broad range and over the course of migration. Monarch females consistently preferred to oviposit on Asclepias incarnata subspecies pulchra. This plant, however, was associated with poor caterpillar growth, low sequestration of toxins, and the highest plant defences (latex and trichomes). We examined flexibility in this apparently maladaptive preference by testing the impact of previous experience and competition on preference. Experience laying on an alternative plant species enhanced preference for that species in contrast to A. i. pulchra. In addition, presence of a (competing) conspecific caterpillar on A. i. pulchra had a strongly deterrent effect and reversed host plant preferences. Thus, monarch butterflies exhibit preferences contrary to what would be expected based on offspring development and sequestered defences, but their preferences are altered by learning and competition, which may allow butterflies to shift preferences as they encounter diverse milkweeds across the landscape. Learning and perception of threats (i.e., competition or predation) may be critical for most herbivorous insects, which universally experience heterogeneity among their potential host plants
Data from: Site- and tree-related factors affecting colonization of cork oaks Quercus suber L. by ambrosia beetles in Tunisia
Key message: Ambrosia beetles are emerging globally as important agents of tree death and decline. In this work, we observed highly variable attack intensity by ambrosia beetles in cork oak stands in Tunisia. A correlation between the proportion of infested trees and average temperature was found. Tree diameter and tree phytosanitary variables further contribute to the attack densities of ambrosia beetles. Results can be relevant for preventive measures aiming to conserve this natural forest heritage.
Context: Cork oak woodlands comprise a unique Mediterranean ecosystem supporting rich biological diversity and providing multiple services. A decline of cork oak forests has been observed in several regions of the Mediterranean Basin in the last four decades, which can be related to climate change, novel biotic agents, and changes in management practices. The ambrosia beetles have been one of the major biotic agents associated with cork oak decline, mostly in the western Mediterranean.
Aims: Assess the presence and attack densities of ambrosia beetles in cork oak Tunisian forests.
Methods: A total of 15 sites located in North Western of Tunisia, comprising 729 sample trees were evaluated. Using generalized linear models, the presence and density of ambrosia beetles’ holes were related to tree and site variables. Variables related to climate, tree (dendrometric parameters, debarking intensity) and biotic agents were examined.
Results: The proportion of trees attacked per site varied from 0 to 100%; in four sites it exceeded 50%. At the site level, the average temperature and tree diameter were the main variables explaining the proportion of attacked trees. Sites with warmer climates showed higher incidence of ambrosia beetles. At the tree level, the presence of attacks increased with tree diameter and concomitantly with intensity of debarking, as well as the presence of tree trunk cavities.
Conclusion: The presence and density of insect attacks were related to tree diameter, area of debarking, and phytosanitary conditions. However, 19% of the trees attacked by ambrosia beetles had no signs of other biotic agents or decline. At the site level, attack rates increased with temperature and tree diameter. A warmer climate may change insect behavior from that of a non-agressive pest to that of an agressive bark beetle. Adaptive forest management practices are needed to reduce infestations
Nest box occupancy by house sparrows along an urbanization gradient
Data include urbanization score, nest box occupancy rates (%), breeding rates (%) in 11 sites for two consecutive years
Data from: Ecological niche modeling as a tool for prediction of the potential geographic distribution of Bacillus anthracis spores in Tanzania
Introduction: Anthrax is caused by the spore-forming, Gram-positive bacterium Bacillus anthracis. The aim of this study was to predict the potential distribution of B. anthracis in Tanzania and produce epidemiological evidence for the management of anthrax outbreaks in the country.
Methods: The Maxent algorithm was used to predict areas at risk of anthrax outbreaks based on the occurrence and environmental data in Arusha and Kilimanjaro regions; the model was later transferred to predict the entire country. Seventy percent of the occurrence data were used to train the model, while 30% were used for model evaluation.
Results: Four regions of northern Tanzania are predicted to have a high risk for anthrax outbreaks, while the southern and western regions had low-risk areas. Soil type (56.5%), soil pH (23.7%), and isothermally (10.4%) were the most important variables for the model prediction, and the most significant soil types were solonetz, fluvisols, and lithosols.
Conclusions: A strong risk level across districts of the Tanzania mainland was identified in this study. A total of 18 districts in Tanzania Mainland are predicted to be at very high risk of an anthrax outbreak occurrence. These findings are important for policymakers to effectively mount targeted control measures for anthrax outbreaks in Tanzania