Dryad Digital Repository (Duke University)

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    197463 research outputs found

    Supporting Mathematica model code

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    Supporting code, sections 1 though 5. Zip contains five Mathematica notebook (.nb) files. Original analysis was done in Mathematica Version 9

    2019-03-06 Hayward et al Soay data

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    Data collected from wild Soay sheep during spring 2016. Each observation represents a faecal sample collected from a given individual on a given day, and the data associated with that. The associated data include the date of sample collection, a female's reproductive effort, and parasitological and immunological data measured from the sample

    RADreads_25.tar

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    2b-RAD sequence reads. 30 files (1 per population) because of file size limitation

    Phillips_etal_EcoEvol_SurveyDataFinal

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    Ship, aerial, and telemetry survey dat

    sFDvent trait database for deep-sea hydrothermal-vent species, v.1.0

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    This file is the processed, ‘ready-to-use’ version of the sFDvent trait dataset that we recommend for use. The sFDvent database comprises species-level trait scores for deep-sea hydrothermal-vent species across the globe, as contributed by experts using their observations on research cruises and in laboratories, as well as published literature. ‘Taxon’ refers to the taxonomic identity assigned by contributors, while ‘UniqueID’ is an identifier created using letters from the taxon and the entry number, to make it easier to work with the data and reference a taxon. A glossary, describing the traits and modalities, is provided with the paper that accompanies this dataset. We would recommend that users check these data are processed in line with criteria and thresholds appropriate for their research question and/or analytical approach and make adjustments where required, as no dataset will be fit for all purposes. Nevertheless, to ensure this dataset is as user-friendly and ‘ready-to-use’ as possible, we only include traits in this version of the dataset that meet thresholds for certainty and coverage, with more than 50% of species scored and/or an average certainty score of more than 2.3 (of a maximum score of 3). References have been assigned numeric identifiers, which can be matched to the references provided in the paper that accompanies this dataset. If more than one reference is provided to support a score, the reference identifiers are separated by a semi-colon (;). Please note that species with UniqueID 'Aus74' should not have 'Lau Basin' listed as a location. This has been corrected since publication and will be updated in future versions of the sFDvent database

    Garcia_Allen_Clusella-Trullas_indices_function

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    Code for computing indices of species' vulnerability to warming based on data of available operative environmental temperature (Te) and the species' thermal preference and tolerance. The function returns the values of the Habitat Thermal Quality, Thermal Safety Margin and Hours of Restriction indices as well as Te summary statistics

    Project Metadata

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    Includes project sample sizes and descriptions of microsatellite loci (diversity statistics and primer sequences)

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