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Table-spatial distribution of Laques erythraeus, Liopecten diegensis and Chlamys hastata
No full textOccurrences of Laques erythraeus, Liopecten diegensis and Chlamys hastata in living (Live) and death (Dead) assemblages, with latitude, longitude, water depth (m), year of sampling (NA if unknown) and sampling gear. Some data refer to presence-absence data (0-absent, 1-present) and some to abundance data (column Data). Occurrences are partitioned into mainland-shelf and island-shelf occurrences (column Shelf.island). Some occurrences are based on photographic surveys. The column "Survey" refers to monitoring of wastewater agencies (LA City, LA County, Orange County, Point Loma, and South Bay), to Bight-wide surveys, to photographic USGS surveys, or Melville 2012 survey (performed by authors of this study)
species info
No full text- Table of data and information for Malagasy cichlids.
- “subfamily” is the corresponding subfamily that each species occurs in.
- “body_centroid_size” is the average centroid size from body shape coordinates in Malagasy cichlids.
- “jaw_centroid_size” is the average centroid size from oral jaw fourbar shape coordinates in Malagasy cichlids.
- “MKT” is the maxillary kinematic transmission for species’ average oral jaw fourbar shapes
body shape coordinates
No full text- Morphometric coordinate data for body shapes of Malagasy cichlids, averaged by species
Data_BIS_experiment
No full textThis file includes data about the single generation of Experiment 2 (experiment with a 20% starting proportion of SC plant): main data about the plants for this generation of selection ("2013_plot_BISexperiment") as well as labwork data for paternity assignment of this first generation progeny ("2013_BIS_MicrosatPaternity"
Morphological data
No full textMorphological individual-level measurement data for the Meliphagides and a range of other Australasian passerine families
Site frequency spectra (SFS) (14 files)
No full textSite requency spectra (SFS) estimated using ANGSD from RAD-seq data mapped to the reference genome.
Four types of files are provided: (1) SFS for the whole genome (with 20 bootstrap replicates), (2) for males only (with 20 bootstrap replicates), (3) for 'normal-recombination' scaffolds only (with 20 bootstrap replicates), (4) for 'normal-recombination' scaffolds with drop-one-out replicates
SDM output maps for 77 butterfly species
No full textZip file containing species distribution model (SDM) ensemble output maps for 77 range-restricted butterfly species on Borneo. Output maps include binary range maps ('BinaryRangeMaps' sub-folder) and probability of occurrence maps ('ProbabilityOccurrenceMaps' sub-folder) for the 77 butterfly species modelled. The 'BinaryMaps_Summed' and 'ProbabilityOccurrenceMaps_Summed' sub-folders contain maps depicting summed species ranges (i.e., species richness) and probability of occurrence (i.e., species occurrence) values, respectively, for: (1) all species (n=77), and (2) all species endemic to Borneo (n=15). Maps for each species are labelled with a unique number; see 'ButterflySpeciesNumbers.csv' for a list of butterfly numbers and corresponding species names
Supplementary Text 1-3, Supplementary Figure 1
No full textIncludes Supplementary Text 1 (information about Crassigyrinus specimens), Supplementary Text 2 (information about Eoherpeton specimens), Supplementary Text 3 (image processing macro used for main text Figure 1), and Supplementary Figure 1 (comparing Crassigyrinus and Ossinodus pathologies). Also includes references for all supplementary material
Data for lme and sem analyses
No full textThis file contains all data used as input for the analysis, both the mixed effect models and the structural equation modelling, in the first sheet. The second sheet, Explanation of columns, provides a description and the units used for each variable