1,720,961 research outputs found
VariantEffect/mavedb-ui: v2023.4.2
No full text<h2>What's Changed</h2>
<ul>
<li>Replace non-existent item.targetGene (coming from API) with item.targetGenes. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/78</li>
<li>Restore mavedb documentation source files and update documentation to Sphinx 7.2.6. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/77</li>
<li>Update README.md to add citation info. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/70</li>
<li>Make changes to the mavedb docs to reflect the current state of the world. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/79</li>
<li>Release 2023.4.2. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/80</li>
</ul>
<p><strong>Full Changelog</strong>: https://github.com/VariantEffect/mavedb-ui/compare/v2023.4.1...v2023.4.2</p>
VariantEffect/mavedb-api: v2023.4.2
No full text<h2>What's Changed</h2>
<ul>
<li>Update README.md to add reference to MaveDB paper by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/103</li>
<li>Release 2023.4.2. by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/115</li>
</ul>
<p><strong>Full Changelog</strong>: https://github.com/VariantEffect/mavedb-api/compare/v2023.4.1...v2023.4.2</p>
VariantEffect/mavedb-ui: v2023.5.0
No full text<h2>What's Changed</h2>
<ul>
<li>Upgrade Node to 20 and swap from webpack/vue-cli to Vite. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/83</li>
<li>Remove Node polyfills and fix heatmap by removing last corejs dependency. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/84</li>
<li>add SendToGalaxy option by @PlushZ in https://github.com/VariantEffect/mavedb-ui/pull/85</li>
<li>Change author query to param translation to use a list. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/89</li>
<li>Changes search filters to only count published score sets. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/88</li>
<li>Use Vite's config functionality to choose API among localhost and production instead of manually editing config.js. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/90</li>
<li>Upgrade package versions and pin versions where breakages would occur. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/92</li>
<li>Add types for the API using openapi-typescript and instructions to re-generate them. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/91</li>
<li>Remove vestigial vue.config.js. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/93</li>
<li>Refactor #1 in preparation for typescriptifying SearchView.vue. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/96</li>
<li>Change from comma-separated query param to repeated query params (refactor 2 in preparation for Typescript). by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/97</li>
<li>Typescriptify SearchView.vue. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/98</li>
<li>Use kebab-case for Ensembl Item Type URL by @bencap in https://github.com/VariantEffect/mavedb-ui/pull/102</li>
<li>Use <code>modelValue</code> in place of <code>inputTextValue</code> for External Target Gene Identifiers by @bencap in https://github.com/VariantEffect/mavedb-ui/pull/101</li>
<li>Merge target gene identifiers change from -4.3 into -5.0. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/103</li>
<li>Based on Ashley's geneName codes, modify Assembly dropdown codes together by @EstelleDa in https://github.com/VariantEffect/mavedb-ui/pull/105</li>
<li>Fix primevue styling for create experiment/scoreset after version upgrade to fix bad-looking forms. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/110</li>
<li>Add /signed-in.html and /signed-out.html that were in webpack version to vite/rollup. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/104</li>
<li>Fix validation errors on new experiment/score set so they no longer forever block submission. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/116</li>
<li>Solve #109 problem by @EstelleDa in https://github.com/VariantEffect/mavedb-ui/pull/113</li>
</ul>
<h2>New Contributors</h2>
<ul>
<li>@PlushZ made their first contribution in https://github.com/VariantEffect/mavedb-ui/pull/85</li>
</ul>
<p><strong>Full Changelog</strong>: https://github.com/VariantEffect/mavedb-ui/compare/v2023.4.2...v2023.5.0</p>
VariantEffect/mavedb-api: v2024.1.0
No full text<h2>What's Changed</h2>
<ul>
<li>Bugfix: Possible to Create Score Sets with No Targets by @bencap in https://github.com/VariantEffect/mavedb-api/pull/185</li>
<li>Ensure Response for Experiment Deletion is NoneType by @bencap in https://github.com/VariantEffect/mavedb-api/pull/189</li>
<li>Use Poetry for Dependency Management by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/180</li>
<li>Better ORCID authorization by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/179</li>
<li>Improvements to Admin User Features (and User Roles more generally) by @bencap in https://github.com/VariantEffect/mavedb-api/pull/184</li>
<li>Fixed: Published Data Can Be Deleted by @bencap in https://github.com/VariantEffect/mavedb-api/pull/195</li>
<li>Expand Target Label Allowed Characters by @bencap in https://github.com/VariantEffect/mavedb-api/pull/194</li>
<li>Public data set export by @jstone-uw in https://github.com/VariantEffect/mavedb-api/pull/173</li>
<li>Request User Emails for Certain Site Features by @bencap in https://github.com/VariantEffect/mavedb-api/pull/186</li>
<li>Merge patch release into main release. Patch release will not be released separately. by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/196</li>
<li>Revert ENV-ifying of ORCID public key and app ID. by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/199</li>
<li>Release 2024.1.0 by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/200</li>
<li>Revert client id to pulling from ENV. by @jstone-uw in https://github.com/VariantEffect/mavedb-api/pull/204</li>
<li>Ashsny/api logging by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/201</li>
<li>Add missing indices; fix score set deletion failure. by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/178</li>
<li>Only Sanitize Target Labels if they are a String by @bencap in https://github.com/VariantEffect/mavedb-api/pull/208</li>
</ul>
<p><strong>Full Changelog</strong>: https://github.com/VariantEffect/mavedb-api/compare/v2024.0.0...v2024.1.0</p>
Going Beyond Counting First Authors in Author Co-citation Analysis
Get PDFThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
VariantEffect/mavedb-api: v2024.2.0
No full text<h2>What's Changed</h2>
<ul>
<li>Merge patch release-2024.1.1 into next major release. by @ashsny in https://github.com/VariantEffect/mavedb-api/pull/223</li>
<li>Data model for external links by @jstone-uw in https://github.com/VariantEffect/mavedb-api/pull/225</li>
</ul>
<p><strong>Full Changelog</strong>: https://github.com/VariantEffect/mavedb-api/compare/v2024.1.1...v2024.2.0</p>
Variations on the Author
Get PDF“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
VariantEffect/mavedb-ui: v2024.2.0
No full text<h2>What's Changed</h2>
<ul>
<li>Merge patch 2024.1.1 release into next major release 2024.2.0. by @ashsny in https://github.com/VariantEffect/mavedb-ui/pull/205</li>
<li>UCSC Genome Browser links (#189) by @jstone-uw in https://github.com/VariantEffect/mavedb-ui/pull/208</li>
</ul>
<p><strong>Full Changelog</strong>: https://github.com/VariantEffect/mavedb-ui/compare/v2024.1.1...v2024.2.0</p>
Appropriate Similarity Measures for Author Cocitation Analysis
Get PDFWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
- …
