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Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
Li, Jun, Zhou, Zheng, Mao, Chuyang, Pan, Zhao, Yao, Yuhao, He, Jinwu, Lin, Yan, Dong, Zhiwei, Liu, Guichun, Zhao, Ruoping, Wang, Wen, Li, Xueyan (2022): Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages. Zootaxa 5205 (3): 231-248, DOI: https://doi.org/10.11646/zootaxa.5205.3.
FIGURES 70–75. Lamprigera minor. 70–72 in Three new species of Lamprigera Motschulsky (Coleoptera, Lampyridae) from China, with notes on known species
FIGURES 70–75. Lamprigera minor. 70–72 Habitus of male adult. 70 Dorsal view; 71 Ventral view; 72 Pronotum. 73–75 Male genitalia. 73 Dorsal view; 74 Ventral view; 75 Lateral view. Scale bars: 5 mm (70–72), 0.5 mm (73–75).Published as part of Dong, Zhiwei, Yiu, Vor, Liu, Guichun, He, Jinwu, Zhao, Ruoping, Peng, Yanqiong & Li, Xueyan, 2021, Three new species of Lamprigera Motschulsky (Coleoptera, Lampyridae) from China, with notes on known species, pp. 441-468 in Zootaxa 4950 (3) on page 458, DOI: 10.11646/zootaxa.4950.3.2, http://zenodo.org/record/464996
FIGURES 94–102. Lamprigera yunnana. 94–96 in Three new species of Lamprigera Motschulsky (Coleoptera, Lampyridae) from China, with notes on known species
FIGURES 94–102. Lamprigera yunnana. 94–96 Habitus of male adult. 94 Dorsal view of male; 95 Ventral view of male; 96 Pronotum of male. 97–99 Male genitalia: 97 Dorsal view; 98 Ventral view; 99 Lateral view. 100 Bioluminescence of female adult. 101 Dorsal view of female adult. 102 Larva of the last instar. Scale bars: 5 mm (94–96, 101–102), 0.5 mm (97–99).Published as part of Dong, Zhiwei, Yiu, Vor, Liu, Guichun, He, Jinwu, Zhao, Ruoping, Peng, Yanqiong & Li, Xueyan, 2021, Three new species of Lamprigera Motschulsky (Coleoptera, Lampyridae) from China, with notes on known species, pp. 441-468 in Zootaxa 4950 (3) on page 464, DOI: 10.11646/zootaxa.4950.3.2, http://zenodo.org/record/464996
FIGURE 8. Male genitalia. A–C Tergite IX, IX in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 8. Male genitalia. A–C Tergite IX, IX (T9, T10) and sternite IX (S9) of male adult (A left view; B ventral view; C dorsal view). D–G Aedeagus (D dorsal view; E ventral view; F left view; G right view). H Median lobe (left view). I Aedeagus, separated (left on dorsal view) J–M Phallobase and parameres (J dorsal view; K ventral view; L left view; M right view) (Scale bar: A–G, H–M, 1 mm).Published as part of Li, Jun, Zhou, Zheng, Mao, Chuyang, Pan, Zhao, Yao, Yuhao, He, Jinwu, Lin, Yan, Dong, Zhiwei, Liu, Guichun, Zhao, Ruoping, Wang, Wen & Li, Xueyan, 2022, Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages, pp. 231-248 in Zootaxa 5205 (3) on page 242, DOI: 10.11646/zootaxa.5205.3.3, http://zenodo.org/record/730596
Venom gland transcriptomes of two elapid snakes (<it>Bungarus multicinctus </it>and <it>Naja atra</it>) and evolution of toxin genes
Abstract Background Kraits (genus Bungarus) and cobras (genus Naja) are two representative toxic genera of elapids in the old world. Although they are closely related genera and both of their venoms are very toxic, the compositions of their venoms are very different. To unveil their detailed venoms and their evolutionary patterns, we constructed venom gland cDNA libraries and genomic bacterial artificial chromosome (BAC) libraries for Bungarus multicinctus and Naja atra, respectively. We sequenced about 1500 cDNA clones for each of the venom cDNA libraries and screened BAC libraries of the two snakes by blot analysis using four kinds of toxin probes; i.e., three-finger toxin (3FTx), phospholipase A2 (PLA2), kunitz-type protease inhibitor (Kunitz), and natriuretic peptide (NP). Results In total, 1092 valid expressed sequences tags (ESTs) for B. multicinctus and 1166 ESTs for N. atra were generated. About 70% of these ESTs can be annotated as snake toxin transcripts. 3FTx (64.5%) and β bungarotoxin (25.1%) comprise the main toxin classes in B. multicinctus, while 3FTx (95.8%) is the dominant toxin in N. atra. We also observed several less abundant venom families in B. multicinctus and N. atra, such as PLA2, C-type lectins, and Kunitz. Peculiarly a cluster of NP precursors with tandem NPs was detected in B. multicinctus. A total of 71 positive toxin BAC clones in B. multicinctus and N. atra were identified using four kinds of toxin probes (3FTx, PLA2, Kunitz, and NP), among which 39 3FTx-postive BACs were sequenced to reveal gene structures of 3FTx toxin genes. Conclusions Based on the toxin ESTs and 3FTx gene sequences, the major components of B. multicinctus venom transcriptome are neurotoxins, including long chain alpha neurotoxins (α-ntx) and the recently originated β bungarotoxin, whereas the N. atra venom transcriptome mainly contains 3FTxs with cytotoxicity and neurotoxicity (short chain α-ntx). The data also revealed that tandem duplications contributed the most to the expansion of toxin multigene families. Analysis of nonsynonymous to synonymous nucleotide substitution rate ratios (dN/dS) indicates that not only multigene toxin families but also other less abundant toxins might have been under rapid diversifying evolution.</p
FIGURES 1–2 in Three new species of Lamprigera Motschulsky (Coleoptera, Lampyridae) from China, with notes on known species
FIGURES 1–2. Geographic distribution of Lamprigera. 1 Distribution of Lamprigera species. 1. L. alticola sp. nov.; 2. L. luquanensis sp. nov.; 3. L. magnapronotum sp. nov.; 4. L. ausgustior (Faimaire, 1886); 5. L. yunnana (Fairmaire, 1897); 6. L. scutatus (Fairmaire, 1897); 7. L. taimoshana Yiu, 2017; 8. L. minor (Olivier, 1885); 9. L. morator (Olivier, 1885); 10. L. marussii (Pic, 1955); 11. L. nepalensis (Hope, 1831); 12. L. nitidicollis (Fairmaire, 1881); 13. L. tardus (Gorham, 1895); 14. L. tenebrosa (Walker, 1858); 15. L. crassus (Gorham, 1880); 16. L. diffinis (Walker, 1858); 17. L. lutosipennis (Faimaire, 1897); 18. L. nitens (Olivier, 1885); 19. L. dorsalis (Olivier, 1903); 20. L. boyei (Motschulsky, 1853). 2 Distributions of Lamprigera male populations in this study. For detailed information of populations see Table 1.Published as part of Dong, Zhiwei, Yiu, Vor, Liu, Guichun, He, Jinwu, Zhao, Ruoping, Peng, Yanqiong & Li, Xueyan, 2021, Three new species of Lamprigera Motschulsky (Coleoptera, Lampyridae) from China, with notes on known species, pp. 441-468 in Zootaxa 4950 (3) on page 443, DOI: 10.11646/zootaxa.4950.3.2, http://zenodo.org/record/464996
Going Beyond Counting First Authors in Author Co-citation Analysis
The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
We provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
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