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Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect
No full textMcCulloch, Graham A., Dutoit, Ludovic, Craw, David, Kroos, Gracie C., Waters, Jonathan M. (2022): Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect. Insect Systematics and Diversity 6 (2): 1-8, DOI: 10.1093/isd/ixac00
Fig. 1. A in Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect
No full textFig. 1. A portion of southeastern South Island, illustrating the topographic isolation of the Maungatua Range, where the flightless stonefly Zelandoperla maungatuaensis (inset) is found.Published as part of <i>McCulloch, Graham A., Dutoit, Ludovic, Craw, David, Kroos, Gracie C. & Waters, Jonathan M., 2022, Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect, pp. 1-8 in Insect Systematics and Diversity 6 (2)</i> on page 2, DOI: 10.1093/isd/ixac009, <a href="http://zenodo.org/record/10116551">http://zenodo.org/record/10116551</a>
Fig. 3 in Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae)
No full textFig. 3. COI haplotype network of Nesoperla fulvescens from five locations. Each circle represents a haplotype, and circles are scaled by size according to the number of sequenced individuals per haplotype. Haplotypes are colored by locality (see key). Uninterrupted lines in the network represent single step mutations. Small open circles indicate hypothetical intermediate (unsampled) haplotypes.Published as part of McCulloch, Graham A., Foster, Brodie J., Dutoit, Ludovic & Waters, Jonathan M., 2022, Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae), pp. 1-9 in Insect Systematics and Diversity 6 (1) on page 5, DOI: 10.1093/isd/ixac027, http://zenodo.org/record/730151
Fig. 2 in Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae)
No full textFig. 2. (A) Map of Nesoperla fulvescens sampling sites from in southern North Island, New Zealand. (B) Principal component analyses, based on 39,642 SNP markers, demonstrating the genomic divergence among different N. fulvescens populations. Individuals are colored by geographic location (from A). Vestigialwinged ecotypes are marked with an asterisk.Published as part of McCulloch, Graham A., Foster, Brodie J., Dutoit, Ludovic & Waters, Jonathan M., 2022, Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae), pp. 1-9 in Insect Systematics and Diversity 6 (1) on page 3, DOI: 10.1093/isd/ixac027, http://zenodo.org/record/730151
Fig. 1 in Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae)
No full textFig. 1. (A) An alpine grassland tributary of the Hector River (elevation 1350 m above sea-level) on Mt Field,Tararua Range (North Island, New Zealand), where vestigial-winged Nesoperla fulvescens were collected; (B) A vestigial-winged N. fulvescens male from Mt Field; (C) National collection records of N. fulvescens, illustrating the narrow distribution of vestigial-winged ecotypes (Tararua Range).Published as part of McCulloch, Graham A., Foster, Brodie J., Dutoit, Ludovic & Waters, Jonathan M., 2022, Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae), pp. 1-9 in Insect Systematics and Diversity 6 (1) on page 2, DOI: 10.1093/isd/ixac027, http://zenodo.org/record/730151
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Fig. 5 in Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae)
No full textFig. 5. Coalescent analyses support parallel flight loss events in Nesoperla fulvescens across different portions of theTararua Range. Competing demographic scenarios (A–C) were assessed with DIYABC-RF, with the level of support noted under each scenario (time is not to scale). Stars indicate inferred wing-reduction events, assuming a winged ancestor. Divergence estimates for the scenario with the highest support (outlined) were calculated with DIYABC-RF.Published as part of McCulloch, Graham A., Foster, Brodie J., Dutoit, Ludovic & Waters, Jonathan M., 2022, Repeated Alpine Flight Loss Within the Widespread New Zealand Stonefly Nesoperla fulvescens Hare (Plecoptera: Gripopterygidae), pp. 1-9 in Insect Systematics and Diversity 6 (1) on page 6, DOI: 10.1093/isd/ixac027, http://zenodo.org/record/730151
Fig. 2 in Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect
No full textFig. 2. Striking genetic substructuring across the narrow geographic range of Zelandoperla maungatuaensis. (a) Collection localities (coloured circles) for Z. maungatuaensis across the Maungatua range.White crosses indicate sites where Z. maungatuaensis has not been found. (b) Principal component analysis, based on 10,429 genome-wide SNPs, illustrating the genetic differentiation among Northern, Southern, and Central Z. maungatuaensis lineages.Published as part of <i>McCulloch, Graham A., Dutoit, Ludovic, Craw, David, Kroos, Gracie C. & Waters, Jonathan M., 2022, Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect, pp. 1-8 in Insect Systematics and Diversity 6 (2)</i> on page 4, DOI: 10.1093/isd/ixac009, <a href="http://zenodo.org/record/10116551">http://zenodo.org/record/10116551</a>
Fig. 3 in Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect
No full textFig. 3. Phylogenetic reconstruction reveals three well-supported Zelandoperla maungatuaensis clades. (a) Bayesian maximum likelihood consensus phylogeny illustrating the relationships among Z. maungatuaensis lineages based on the mitochondrial COI gene. Posterior probability values are noted above each node. Outgroups (Zelandoperla agnetis and Zelandoperla denticulata) are excluded for diagrammatic clarity. (b) Midpoint rooted maximum likelihood phylogeny illustrating genome-wide relationships among Z. maungatuaensis lineages, based on 10,429 SNP markers. IQTREE ultrafast bootstrap values ≥ 90 are indicated at each node.Published as part of <i>McCulloch, Graham A., Dutoit, Ludovic, Craw, David, Kroos, Gracie C. & Waters, Jonathan M., 2022, Genomics Reveals Exceptional Phylogenetic Diversity Within a Narrow-Range Flightless Insect, pp. 1-8 in Insect Systematics and Diversity 6 (2)</i> on page 5, DOI: 10.1093/isd/ixac009, <a href="http://zenodo.org/record/10116551">http://zenodo.org/record/10116551</a>
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