1,721,016 research outputs found
Linkage mapping in tetraploid willows: segregation of molecular markers and estimation of linkage phases support an allotetraploid structure for Salix alba x Salix fragilis interspecific hybrids
No full textSalix alba-Salix fragilis complex includes closely related dioecious polyploid species, which are obligate outcrossers. Natural populations of these willows and their hybrids are represented by a mixture of highly heterozygous genotypes sharing a common gene pool. Since nothing is known about their genomic constitution, tetraploidy (2n=4x=76) in willow species makes basic and applied genetic studies difficult. We have used a two-way pseudotestcross strategy and single- dose markers (SDMs) to construct the first linkage maps for both pistillate and staminate willows. A total of 242 amplified fragment length polymorphisms (AFLPs) and 50 selective amplifications of microsatellite polymorphic loci (SAMPL) markers, which showed 1:1 segregation in the F1 mapping populations, were used in linkage analysis. In S. alba, 73 maternal and 48 paternal SDMs were mapped to 19 and 16 linkage groups covering 708 and 339 cM, respectively. In S. fragilis, 13 maternal and 33 paternal SDMs were mapped
in six and 14 linkage groups covering 98 and 321 cM, respectively. For most cosegregation groups, a comparable number of markers linked in coupling and repulsion was identified. This finding suggests that most of chromosomes pair preferentially as occurs in allotetraploid species exhibit- ing disomic inheritance. The detection of 10 pairs of marker alleles from single parents showing codominant inheritance strengthens this hypothesis. The fact that, of the 1122 marker loci identified in the two male and female parents, the vast majority (77.5%) were polymorphic and as few as 22.5% were shared between parental species highlight that S. alba and S. fragilis genotypes are differentiated. The highly difference between S. alba- and S. fragilis-specific markers found in both parental combinations (on average, 65.3 vs 34.7%, respectively) supports the (phylogenetic) hypothesis that S. fragilis is derived from S. alba-like progenitors
Spatial genetic structure reveals migration directionality in Mediterranean Ruppia spiralis (Western Sicily)
Get PDFMediterranean salinas, originally built for salt production, function as alternative wetlands. A variety of accompanying lagoon, ditch, and marsh systems are suitable habitats for salt-tolerant submerged macrophytes and often characterized by monospecific beds of Ruppia. Traditionally, birds are considered the main dispersal vector of submerged macrophytes. However, Ruppia spiralis habitats are under marine influence and therefore interference of coastal currents in their connectivity might be expected. In this study, we aim to infer connectivity and spatial patterns from population genetic structures. Using nuclear microsatellite loci, the nuclear ribosomal cistron and chloroplast sequences, we investigated the genetic diversity, genetic structure, and demographic history of 10 R. spiralis populations along a 25-km coastal stretch of western Sicily encompassing a variety of saline habitats. We tested for local fine-scaled structures, hypotheses of regional isolation by distance, and migration directionality. Our results revealed a high degree of allele and gene diversity that was locally maintained by outcrossing. At the regional level, we detected isolation by distance and identified three genetically differentiated clusters, with a significant structure that matches an overall north-to-south unidirectional migration model. This directionality follows the main sea current, hence indicating the importance of hydrological connectivity in regional conservation management. Significant fine-scale spatial structures only emerged in some populations and were absent in the ‘salina fridda’ habitat that showed the largest clonal richness. The local site-dependent patterns emphasize a need to examine the influence of disturbances on seed recruitment and clonal growth over small distances
The genus Ruppia L. (Ruppiaceae) in the Mediterranean region: An overview.
Get PDFThis paper reviews the current knowledge on the diversity, distribution and ecology of the genus Ruppia L. in the Mediterranean region. The genus Ruppia, a cosmopolitan aquatic plant complex, is generally restricted to shallow waters such as coastal lagoons and brackish habitats characterized by fine sedimentsand high salinity fluctuations. In these habitats Ruppia meadows play an important structural and func-tional role. Molecular analyses revealed the presence of 16 haplotypes in the Mediterranean region, one corresponding to Ruppia maritima L., and the others to various morphological forms of Ruppia cirrhosa (Petagna) Grande, all together referred to as the “R. cirrhosa s.l. complex”, which also includes Ruppia drepanensis Tineo. Populations of hybrid origin between R. maritima and R. cirrhosa and polyploidy have been detected
Going Beyond Counting First Authors in Author Co-citation Analysis
Get PDFThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
Get PDF“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Get PDFWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
Get PDFWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
koamabayili/VECTRON-author-checklist: VECTRON author checklist
No full textWe have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
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