1,720,957 research outputs found
Sewage effects on the food sources and diet of benthic foraminifera living in oxic sediment: a microcosm experiment
No full textA microcosm experiment was conducted to investigate the effects of sewage-derived particulate organic matter (POM) on the food sources and diets of two species of intertidal benthic foraminifera, Ammonia beccarii and Haynesina germanica, using lipid biomarkers to determine trophic relationships. The lipid content of the sediment and associated micro-organisms was a guide to potential food sources while that of the foraminifera was a guide to what they had actually eaten. Six microcosm tanks were established, with constant salinity, temperature and oxygen content, and each with a thin layer of sediment containing living foraminifera. Three microcosms were used as controls and three were treatments to which the POM from secondary treated sewage was added. Each microcosm was treated as a single replicate (to avoid pseudoreplication). The experiment was run for 38 days. The results showed that the food sources (from the sediment) and the diet of the foraminifera did not significantly differ in the controls or the treatments, but quantities of fatty acids decreased in both the sediment system and the foraminifera over the duration of the experiment. It is concluded that sewage-POM (secondary treatment) does not have a direct effect on the food sources of the foraminifera or their diet. The foraminifera did not feed directly on the sewage-derived POM, nor did the addition of sewage stimulate growth of micro-organisms associated with the sediment system. However, recent field data collected by the authors provides evidence that season plays an important role in foraminiferal response to organic pollution (OP), and microcosm sediment might have been unknowingly collected at a time when foraminifera are now known not to respond to OP, i.e. in summer
Flow cytometric enumeration of DNA-stained oceanic planktonic protists
No full textThe aim of this study was to test the practicality of enumerating fixed, DNA-stained heterotrophic protists (H) and phototrophic protists (P) in contrasting regions of the Atlantic Ocean. Oceanic protists were enumerated using a standard flow cytometer (FACSort, BD) at an enhanced flow rate of up to 1.0 mL min–1 to increase numbers of counted cells. The enumeration error of protists decreased hyperbolically from 30–40 to < 5% corresponding to the number (<100 to > 2000) of enumerated cells. H and P were discriminated using the extra red chlorophyll-derived plastidic fluorescence of the latter. The relationship between counts of stained and unstained fixed and unfixed P was statistically close to 1:1, confirming the accuracy of stained protist counting by flow cytometry and adequate discrimination of P from H cells. The estimated average abundance of H in the surface mixed layer of the southern and northern oligotrophic gyres was remarkably similar, with 400 ± 140 and 450 ± 60 cells mL–1, respectively, adding further evidence to the suggestion that these regions are in steady state. In agreement with earlier studies in more productive aquatic environments, a significant correlation (correlation coefficient 0.84, P < 0.0001) was found between the H and the total bacterioplankton numbers, with an average ratio of 1300 prokaryotes to 1 H cell, suggesting a relatively constant trophic interaction between these two groups. This study demonstrates that flow cytometric enumeration of protists is 100 times faster compared with microscopy and, thus, represents a major improvement for quantifying protists in ocean waters, including oligotrophic gyres
Bacterioplankton composition in the Scotia Sea, Antarctica, during the austral summer of 2003
Full text linkPhysical ocean processes (ice-melt, island run-off and upwelling of nutrients) were hypothesised to affect the bacterioplankton composition in the surface mixed layer of the Scotia Sea during the austral summer of 2003, and this was investigated using flow cytometry and catalysed reporter deposition fluorescence in situ hybridisation (CARD-FISH) techniques. The bacterioplankton was composed predominantly of Alphaproteobacteria (PB), comprising SAR11, Roseobacterspp. and SAR116 groups, followed by Sphingobacteria/Flavobacteria and Gammaproteobacteria, including SAR86. Two distinct bacterioplankton communities were identified, largely based on bacterioplankton abundance, which varied from 0.3 ± 0.06 × 106 cells ml–1 in the west to 0.8 ± 0.3 × 106 cells ml–1 in the east, and a corresponding difference in SAR11 percentages of 30 ± 15% in the west compared to 5 ± 5% in the east. The western community was present in waters that were largely in an over-wintered, pre-bloom condition. The eastern bacterioplankton community was associated with phytoplankton blooms developed within the eastern Scotia Sea nutrient upwelling zone, where the Antarctic Circumpolar Current (ACC) encounters the shallow bathymetry associated with the Scotia Arc, in combination with seasonal ice-melt and island effects that enabled surface water stratification
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
Full text link“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Full text linkWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
Full text linkWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
koamabayili/VECTRON-author-checklist: VECTRON author checklist
No full textWe have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
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