1,720,957 research outputs found
Capillary electrophoresis applied to polysaccharide characterization
No full textCapillary electrophoresis is a consolidated analytical approach for the structural characterization of polysaccharide mono- and oligomer constituents, as demonstrated in this chapter, which surveys several applications of this technique on chemically and enzymatically degraded polysaccharides, covering the last 10 to 12 years Capillary electrophoresis is also demonstrated to be highly reliable for determination of polysaccharides in biological samples, as it analyzes quite complex matrices even without any pretreatment, a distinctive feature with respect to other separative strategies The versatility of this technique is clearly demonstrated by its potential in evaluating macromolecular features of polysaccharides, such as size (molecular weight, chain length), chain rigidity, charge density, and chemical modification
Analytical Insights into Protein–Alum Interactions and Their Impact on Conformational Epitope
Full text linkSeveral alum-adjuvanted vaccines have been licensed in the past 40 years. Despite its extensive and continuous use, the immune mechanism of action of alum adjuvants is not yet completely understood. Many different variables during the formulation process have been assessed as critical for alum-adjuvanted vaccines, although most of them are still not yet fully understood. The absence of a clear understanding of all the possible variables regulating the mechanism of action and the behavior that alum adjuvant imposes on the protein antigen may also be related to analytical challenges. For this reason, there is an urgent need for a fast and simple tool that is possible without a preliminary sample manipulation and is able to control the amount and the degree of antigen adsorption levels and their consistency across different production processes. This work attempts to develop new analytical tools with the aim of directly quantifying and assessing both the content and/or the purity of formulated alum-adsorbed antigens, without any preliminary sample manipulation (e.g., antigen desorption) being reported. In addition, the different confirmation/behavior in terms of the response to specific monoclonal antibodies in the presence of different ratios of alum-OH adsorbent antigens have been investigated. As a proxy to develop new analytical tools, three recombinant protein adsorbed models were used as follows: Neisseria adhesin A (NadA), Neisserial Heparin Binding Antigen (NHBA), and factor H binding protein (fHbp) as antigens, as well as aluminum hydroxide (AH) as an adjuvant system. The selection of the adjuvanted system model was dictated due to the substantial quantity of the literature regarding the protein structure and immunological activities, meaning that they are well characterized, including their adhesion rate to alum. In conclusion, three different analytical tools were explored to quantify, detect, and study the behavior of antigens in the presence of the alum adjuvant
Can the interaction between the antimicrobial peptide LL-37 and alginate be exploited for the formulation of new biomaterials with antimicrobial properties?
No full textIn this study, we took advantage of the strong interaction between the antimicrobialpeptideLL-37 and anionic polysaccharides, such as alginate, to design and evaluate a new biomaterial with putative antibacterial properties.
To begin with, we have investigated the effect of different biocompatible polysaccharides on both the cytotoxicity and the antimicrobial activity of LL-37, a powerful endogenous antimicrobialpeptide of human origin, whose use in therapy has been hampered by its toxicity to host cells. Interactions of the peptide with polysaccharides were evaluated by circular dichroism analyses, which revealed a different capacity of the polymers to induce the active helical conformation in the peptide. Among the polysaccharides tested, sodium alginate was the only one that significantly reduced the toxicity of LL-37 toward mammalian cells. A sodium alginate/LL-37 preparation was then tested on four bacterial strains. The Gram-negative bacteria resulted susceptible to the mixture, while the growth of the Gram-positive ones was poorly affected and only at the highest peptide concentration tested. Following the positive results with Gram-negative species, the alginate/LL-37 binary system was used for the preparation of calcium alginate beads, which were tested for peptide release
Use of Capillary Electrophoresis for Polysaccharide: Studies and Applications
No full textCE applications to charged polysaccharides are briefly reported. A simple procedure is presented to determine the esterification degree of a hyaluronan derivative. In this case the degree of substitution was as low as 14 %. The molecular weight distribution of mannuronic oligosaccharides mixture produced by hydrolysis of native polymannuronic is readily calculated from peak area of the species resolved by CE on the basis of a specific degree of polymerization. The influence of the applied electric field strength on the free solution mobility of hyaluronan samples is briefly addressed for molar masses of the order of 105 and 106 g/mol. The data are compared with the results obtained for a 50 % galactose substituted HA. Mobility data obtained as a function of buffer pH for a native HA sample as well as for two galactose-amide HA derivatives, having slightly different degrees of substitution, are presented and discussed in terms of the polymer charge density parameters ξ. In most cases, more questions than answers arise from the application of CE to charged polysaccharides. However, perspectives are disclosed for a further understanding of the reliability of CE applied for the structural elucidation of such macromolecules
Micrometer-scale systems for regenerative medicine applications
Full text link2008/2009La medicina rigenerativa applicata al campo ortopedico è considerata una possibile opzione terapeutica per la riparazione del tessuto osseo danneggiato. Si stanno studiano e sviluppando una gran varietà di sostituti ossei sintetici come valida alternativa agli innesti di tipo tissutale.
Lo scopo di questo lavoro di tesi è la progettazione e lo sviluppo di un materiale iniettabile per il riempimento dei difetti ossei. In particolare abbiamo sviluppato un riempitivo composito iniettabile usando materiali biodegradabili di tipo polisaccaridico funzionalizzati con elementi bioattivi come mediatori dell’adesione cellulare, fattori di crescita osteoinduttivi e peptidi di tipo antimicrobico. Il costrutto finale è un composito a due fasi, le cui parti, inizialmente, sono state sviluppate separatamente. La struttura è stata progettata come composta da una parte bioattiva, costituita da microsfere disidratate di alginato e idrossiapatite recanti peptidi, immersa in una matrice veicolante rappresentata da una soluzione concentrata di acido ialuronico. Con lo scopo di ottenere le microsfere bioattive, sono state esplorate diverse tecniche per la coniugazione peptide-polisaccaride e sono stati presi in considerazione svariati sistemi di rilascio di sequenze peptidiche. In particolare sono stati considerati tre peptidi noti per la loro bioattività: peptidi di tipo RGD, sequenza favorente l’adesione cellulare, un frammento della proteina BMP-2 (bone morphogenetic protein-2) in grado di promuovere il differenziamento di cellule mesenchimali ad osteoblasti e LL-37 peptide antimicrobico umano.
Per ottenere un costrutto con proprietà bioadesive, gli sforzi sono stati volti ad un miglioramento dell’interfaccia fra le sfere di alginato/idrossiapatite e il tessuto osseo. Questo è stato possibile immobilizzando sulla superficie delle sfere dei peptidi contenti la sequenza RGD e assicurandone il gusto orientamento ed un’alta resa di immobilizzazione. Dopo aver testato diverse strategie chimiche, l’immobilizzazione effettuata sfruttando la formazione di un ponte disolfuro fra ChitLac preventivamente modificato con gruppi tiolici e un peptide contenente un residuo di cisteina, è stata valutata come la miglior strategia in termini di resa di reazione; allo stesso tempo le microsfere funzionalizzate in questo modo hanno dimostrato un’alta capacità di promuovere l’adesione e la crescita di osteoblasti in esperimenti effettuati in vitro.
Un altro importante tema ha riguardato l’incorporazione di un frammento della proteina BMP-2 nel costrutto al fine di promuovere il differenziamento e quindi la proliferazione cellulare. La sequenza temporale degli eventi fisiologici, ha suggerito lo sviluppo di un sistema che risulta essere la somma di due diverse strategie di rilascio: la prima caratterizzata dal semplice intrappolamento del peptide in un sistema di sfere di alginato capace di un rilascio veloce, ed il secondo caratterizzato da un rilascio lento e costante ottenuto grazie all’azione idrolitica di esterasi. Questo è stato possibile inserendo un legame enzimaticamente idrolizzabile nella struttura contenente il frammento di BMP. Questa seconda strategia ha sfruttato una chimica altamente selettiva quale la “click chemistry”. La sintesi della molecola spaziatrice recante un legame enzimaticamente idrolizzabile è stata effettuata partendo da un γ-valerolattone. Questo spaziatore è stato inoltre progettato per recare un gruppo terminale funzionale adeguato per le reazioni di click chemistry ed è stato legato al ChitLac. La reazione di cicloaddizone è stata poi effettuata fra il ChitLac funzionalizzato con lo spaziatore e il frammento di BMP anch’esso opportunamente funzionalizzato. L’idrolisi enzimatica è stata verificata, inoltre è stata eseguita un’esaustiva caratterizzazione tramite NMR ed elettroforesi capillare.
E’ stata poi presa in considerazione l’incorporazione di peptidi antimicrobici nel costrutto. Partendo da dati di dicroismo circolare riguardanti l’influenza che alcuni polisaccaridi hanno sulla conformazione del peptide LL-37 in soluzione, è stata riconosciuta alla miscela LL- 37/alginato la capacità di modulare la citotossicità del peptide. La miscela ha inoltre dimostrato la capacità di mantenere l’attività antimicrobica su batteri Gram negativi e questo ci ha spinto a considerarne l’applicazione su costrutti solidi con finalità ortopediche. In quest’ambito è stato escluso, da esperimenti in vitro, un effetto causato dal semplice contatto fra cellule o batteri e una superficie di alginato caricato col peptide. L’unico possibile meccanismo di rilascio riscontrato in un costrutto di alginato/LL-37 è stato tramite la degradazione di questo.
Infine, il costrutto è stato assemblato incorporando le microsfere disidratate in una soluzione concentrata di acido ialuronico, ottenendo un costrutto dall’aspetto simile ad una pasta che è in grado di facilitare il processo di iniezione del riempitivo. Misure di tipo reologico hanno indicato in incremento della componente viscoelastica aggiungendo il particolato nella soluzione di acido ialuronico, questo generalmente è associato ad una buona capacità di recuperare l’elasticità dopo l’iniezione il che è un requisito richiesto ai biomateriali usati come riempitivi ossei.
I risultati ottenuti hanno dimostrato l’applicabilità del composito come sostituto osseo dotato di proprietà bioattivite (osteoconduzione, osteoinduzione, bioadesività ed effetto antimicrobico su ceppi di tipo Gram negativo).Bone regenerative medicine is considered a potential therapeutic option for the healing of damaged bone tissue. A variety of synthetic bone graft substitutes have been investigated as alternative to current tissue based bone graft materials.
In this study efforts have been made to achieve an injectable material to fill bone defects. We have designed composite injectable filler by using polysaccharides as biodegradable materials, and by functionalizing them with bioactive elements such as adhesion mediators, osteoinductive growth factors and anti-microbial peptides.
The final construct is represented by a two-phase composite, whose parts have been initially built separately. The structure was thought as composed by bioactive alginate/hydroxyapatite dried microbeads functionalized with peptides, suspended in a concentrate hyaluronic acid solution as the matrix vehicle.
With the aim to obtain bioactive alginate/HAp beads, different techniques of peptides-polysaccharides conjugation were considered and different peptide delivery systems were explored. In detail the peptides considered were three, the RGD active sequence with bioadhesive properties, a fragment of BMP-2 (bone morphogenetic protein-2) that promotes the differentiation of MSCs into osteoblasts, and LL-37 a human antimicrobial peptide.
In order to obtain a construct with bioadhesive properties, efforts have been made to improve the tissue-alginate/HAp beads interface by immobilizing RGD peptide sequence in a manner that assure the right motif orientation and high yields. After having tested various chemical strategies, the immobilization by disulfide bridge formation between a ChitLac previously modified with a thiol group and a peptide containing a cysteine residue was evaluated to be the best in terms of yield; at the same time μbeads functionalized in that way exhibit a very high osteoblast adhesion and growth promotion in in vitro experiments.
Another important topic regarded the incorporation of BMP-2 epitope fragment into the construct, to enhance differentiation and proliferation. Time-tuned physiological functionality suggested the development of a system being the sum of two delivery strategies: the first characterized by simple entrapment in alginate beads for a fast burst release and the second one giving a slow and constant release, obtained by the action of bone esterases on an enzymatically cleavable linker. This second strategy exploited a high selective chemistry such as that of click reactions. Starting by a γ-valerolactone the synthesis of the enzymatically cleavable spacer was performed. The linker was designed to contain a final functional group for click chemistry. It was bound to ChitLac and then to a modified BMP fragment by a click reaction. Enzymatic cleavage was verified and an exhaustively characterization by means of NMR and capillary electrophoresis was performed.
The incorporation of antimicrobial peptides was also taken into account. Starting from the information gained by circular dichroism data on the influence on LL-37 conformation given by several polysaccharides, an optimal modulation activity of the cytotoxic effect of LL-37 was found using the peptide/alginate mixture. The demonstrated maintenance of antimicrobial activity on Gram negative strains drove to an application on solid constructs for orthopaedic applications. An effect caused by the simple contact between cells or bacteria and alginate surface loaded with the peptide, was excluded by in vitro experiments. The only possible release mechanism that an LL-37/alginate construct was able to show was related to the degradation of this one.
Finally, the whole construct was assembled by incorporating the dried microbeads in a concentrate hyaluronic acid solution, obtaining a paste-like construct that can facilitate the injectability of the particulate. Rheological measurements indicated an increment of the viscoelastic component by adding particulate into hyaluronate solution; this, generally, is associated to a good capacity to regain the elasticity after the injection, as expected for a biomaterial for bone filler applications.
The results collected demonstrate the applicability of the obtained composite as bone graft substitute with bioactive properties (osteoinduction, osteoconduction, bioadhesivity and antibiotic effect on Gram negative strains).XXII Ciclo197
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
Full text link“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Full text linkWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
Full text linkWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
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