1,721,025 research outputs found

    Director reorientation due to dye photoabsorption

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    The addition of small quantities of an absorbing dye can modify the optical properties of liquid crystals, in particular by producing a photo-induced torque reorienting the director. Such an effect is modelled by including in the free energy the contribution of dye-solvent electrostatic interactions between the molecular charges and the solvent polarisation. The system evolution is described through the torque acting on the director and the diffusion equations for the orientational distributions of the dye in the ground and the excited states. In the presence of a time scale separation between molecular variables (orientation) and collective properties (director), an explicit relation is derived for the dye photo-induced torque, which appears to be compatible with the experimental findings

    PLS for classification

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    Partial Least Squares regression (PLS) is a multivariate technique developed to perform regression in the case of multivariate responses when multicollinearity, redundancy and noise affect the predictors. In spite of several efforts have been made to extend PLS to classification problems, this is still a current field of research. In the present study, a new technique called PLS for classification is introduced to solve the general G-class problem. It is developed within a self-consistent framework based on linear algebra and on the theory of compositional data. After the introduction of the notion of probability-data vector, the space of the predictors and that of the conditional probabilities are linked, and a well-defined least squares problem, whose solution specifies the relationship between probabilities and predictors, is solved by a suitable reformulation of PLS2. The method estimates directly the conditional probability of the class membership given the predictors. The score vectors are introduced only in a second step to improve model interpretation. The main properties of PLS for classification and its relationships with PLS-DA are discussed. One simulated and one real data sets are investigated to show how the method works in practice

    Projection to latent structures with orthogonal constraints for metabolomics data

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    Multivariate techniques based on projection methods such as Principal Component Analysis and Partial Least Squares (PLS) regression are widely applied in metabolomics. However, the effects of confounding factors and the presence of specific clusters in the data could force the projection to produce inefficient representations in the latent space, preventing the identification of the most relevant data variation. To overcome this issue, we introduce a general framework for projection methods, allowing an easy integration of orthogonal constraints, which help in reducing the effect of uninformative variations. In particular, the discussed algorithms address different scenarios. When known confounding factors can be explicitly encoded into a proper constraint matrix, orthogonally Constrained Principal Component Analysis (oCPCA) and orthogonally Constrained PLS2 (oCPLS2) can be used. Orthogonal PLS (OPLS) and post‐transformation of PLS2 (ptPLS2), instead, are suited to problems in which a constraint matrix cannot be defined. Finally, a data integration task is considered: Orthogonal two‐block PLS (O2PLS) and Orthogonal Wold's two‐block Mode A PLS (OPLS‐W2A) are used to identify the common variation between two data set

    Molecular theory of dielectric relaxation in nematic dimers

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    This paper reports a theory for the dielectric relaxation of dimeric mesogenic molecules in a nematic liquid crystal phase. Liquid crystal dimers consist of two mesogenic groups linked by a flexible chain. Recent experimental studies [D. A. Dunmur, G. R. Luckhurst, M. R. de la Fuente, S. Diez, and M. A. Perez Jubindo, J. Chem. Phys. 115, 8681 (2001)] of the dielectric properties of polar liquid crystal dimers have found unexpected results for both the static (low frequency) and variable frequency dielectric response of these materials. The theory developed in this paper provides a quantitative model with which to understand the observed experimental results. The mean-square dipole moments of alpha, omega-bis[(4-cyanobiphenyl-4'-yl]alkanes in a nematic phase have been calculated using both the rotational isomeric state model and a full torsional potential for the carbon-carbon bonds of the flexible chain. The orienting effect of the nematic phase is taken into account by a parametrized potential of mean torque acting on the mesogenic groups and the segments in the flexible chain. Results of calculations using the full torsional potential are in excellent agreement with experimental results for comparable systems. The probability density p(eq)(beta(A),beta(B)) for the orientation of the mesogenic groups (A,B) along the nematic director is also calculated. The resultant potential of mean torque is a surface characterized by four deep energy wells or sites equivalent to alignment of the terminal groups A and B approximately parallel and antiparallel to the director; of course, the reversal of the director leads to equivalent sites. This potential energy surface provides the basis for a kinetic model of dielectric relaxation in nematic dimers. Solution of the Fokker-Planck equation corresponding to this four-site model gives the time dependence of the site populations, and hence the time-correlation functions for the total dipole moment along the director. In this model the end-over-end rotation of the molecule, corresponding to simultaneous reversal of both mesogenic groups, is excluded because the activation energy is too large. Results are presented for a number of cases, in which a dipole is located on one or both of the mesogenic groups, and additionally where the groups differ in size. For the latter, under particular conditions, the correlation function exhibits a biexponential decay, which corresponds to two low frequency absorptions in the dielectric spectrum. This is exactly what has been observed for nonsymmetric nematic dimers having different groups terminating a flexible chain. Experimental results over a range of temperature for the nonsymmetric dimer alpha-[(4-cyanobiphenyl)-4'-yloxy]-omega-(4-decylanilinebenzylidene-4'-o xy)nonane can be fitted precisely to the theory, which provides new insight into the orientational and conformational dynamics of molecules in ordered liquid crystalline phases

    Going Beyond Counting First Authors in Author Co-citation Analysis

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    The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
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