3 research outputs found
A laboratory bioassay for evaluating pathogenicity of Macrophomina phaseolina and Rhizoctonia solani isolates to strawberry stolons
No full textMacrophomina phaseolina and Rhizoctonia spp. are the most important soilborne pathogens of the strawberry crop that cause seriously reduced yields. Various methods are being used to determine pathogenicity of these fungi isolated from strawberry; however, they take a long time to grow strawberry plants. They also encounter some problems to provide a large number of healthy plants for the pathogenicity tests. Therefore, the aim of this study was to develop a faster and more reliable pathogenicity test for soilborne fungal pathogens of strawberry by using the stolons of healthy strawberry plants. The stolon inoculation method was demonstrated to be easy and rapid for properly distinguishing soilborne fungal species of strawberry, whether pathogenic or non-pathogenic, and also for assessing the isolates for virulence
Effects of soil amendments combined with solarization on the soil microbial community in strawberry cultivation using quantitative real-time PCR
No full textExperiments were conducted in commercial fields of strawberry-growing areas of the Aydin Province of Turkey during two cropping seasons: 2010-2011 and 2011-2012. Each year, eight separate treatments were used: (1) untreated control (C), (2) solarization alone (S), (3) solarization + broccoli (SBr), (4) solarization + fava bean (SFB), (5) solarization + dry olive-mill wastewater (SDOMW), (6) solarization + rice hulls (SRH), (7) solarization + sulfur powder (SSu), and (8) solarization + vermicast (SVe). DNA was extracted from bulk soil samples before and after solarization. The populations of the major taxonomic groups of bacteria and soil-borne fungal pathogens of strawberry were quantitatively calculated by quantitative real-time PCR (qPCR) with specific primer pairs using standard curves. The marketable fruit yield was recorded in the experimental plots. After the 6-week solarization period, there were significant reductions for total bacteria and for alpha-Proteobacteria in all of the experimental plots, except for SDOMW. However, the abundance of beta-Proteobacteria significantly increased in all of the experimental plots (except for C and SFB in 2011). Significant increases in Firmicutes and Actinobacteria were also recorded in all of the treated plots. The highest significant increase was noticed with SDOMW treatments for total bacteria, alpha-Proteobacteria, beta-Proteobacteria, Firmicutes and Actinobacteria in both years. The target level of Verticillium spp. Rhizoctonia solani and Fusarium oxysporum decreased significantly in all of the treated plots after solarization in both years. The reductions of M. phaseolina were significant in S, SVe, and SSu and were the highest in SDOMW in 2011; these reductions were significant in S, SSu and SDOMW in 2012. The abundance of Trichoderma spp. decreased insignificantly in all of the experimental plots. The highest significant yields were obtained from the combination of SDOMW, SRH and SSu compared to solarization alone in both seasons
Globally invading populations of the fungal plant pathogen Verticillium dahliae are dominated by multiple divergent lineages
No full textThe spread of aggressive fungal pathogens into previously non-endemic regions is a major threat to plant health and food security. Analyses of the spatial and genetic structure of plant pathogens offer valuable insights into their origin, dispersal mechanisms and evolution, and have been useful to develop successful disease management strategies. Here, we elucidated the genetic diversity, population structure and demographic history of worldwide invasion of the ascomycete Verticillium dahliae, a soil-borne pathogen, using a global collection of 1100 isolates from multiple plant hosts and countries. Seven well-differentiated genetic clusters were revealed through discriminant analysis of principal components (DAPC), but no strong associations between these clusters and host/geographic origin of isolates were found. Analyses of clonal evolutionary relationships among multilocus genotypes with the eBURST algorithm and analyses of genetic distances revealed that genetic clusters represented several ancient evolutionary lineages with broad geographic distribution and wide host range. Comparison of different scenarios of demographic history using approximate Bayesian computations revealed the branching order among the different genetic clusters and lineages. The different lineages may represent incipient species, and this raises questions with respect to their evolutionary origin and the factors allowing their maintenance in the same areas and same hosts without evidence of admixture between them. Based on the above findings and the biology of V. dahliae, we conclude that anthropogenic movement has played an important role in spreading V. dahliae lineages. Our findings have implications for the development of management strategies such as quarantine measures and crop resistance breeding
