1,720,955 research outputs found
Effects of HAART on the gut mucosal immune system in HIV-infected patients
0 Titelblatt und Inhaltsverzeichnis
1.0 Einleitung 1
1.1
1.2
1.3
1.4 Die besondere Rolle der intestinalen Mukosa bei der HIV-Infektion
Zytokine
Zytokinexpression in der Mukosa während der HIV-Infektion
Zielsetzung 1
3
7
8
2..0 Material 9
2.1
2.2
2.2.1
2.2.2
2.3
2.4
2.5
2.6
2.7
2.8
2.9
2.10
2.11 Charakterisierung von Patienten und Kontrollpersonen
HIV-Beladung und CD4+T-Zellzahl>
HIV-Beladung im Blut und in der intestinalen Mukosa unter HAART
CD4+T-Zellzahlen im Blut und in der intestinalen Mukosa unter HAART
Chemikalien und Reagenzien
Kits
Enzyme mit Puffern
Primer und Hybridisierungssonden
Zellen.
Puffer und Stammlösungen
Kulturmedien..
Geräte
Verbrauchsmaterialien 9
10
10
11
11
12
14
15
16
17
18
19
19
3.0 Methoden 20
3.1
3.2
3.3
3.4
3.5
3.6
3.7
3.8
3.8.1.
3.8.2.
3.8.3.
3.8.4.
3.8.5.
3.8.6.
3.8.7.
3.9.
3.9.1.
3.9.2.
3.9.3.
3.10. RNA-Extraktion
Bestimmung von Konzentration und Reinheit der RNA
DNase-Verdauung
Reverse Transkription.
Primerdesign
Amplifikation von cDNA mittels konventioneller PCR
Detektion der Amplifikate mittels Gelelektrophorese.
Herstellung quantitativer Standardreihen für die Echtzeit-PCR
PCR-Produktreinigung.
Klonierung, Transformation und Kultivierung.
Plasmidextraktion.
Restriktionsverdauung.
Bestimmung der Konzentration des Plasmids im Eluat.
Berechnung der Kopienzahl pro Mikroliter
Erstellung der Verdünnungsreihen mit definierter Kopienzahl
Echtzeit-PCR mit dem LightCycler
Der LightCycler.....
SYBR Green.......
Spezifische Hybridisierungssonden.
Statistische Auswertung... 20
21
22
23
24
25
27
28
28
29
31
32
34
35
35
36
36
39
41
43
4.0 Ergebnisse 44
4.1.
4.2
4.3
4.3.1.
4.3.2.
4.3.3.
4.3.4.
4.3.5.
4.3.6.
4.4 RNA-Isolierung.
Wiederfindung
PCR-Etablierung.
Methodische Nachweisgrenze
LightCycler-PCR: SYBR Green oder spezifische Hybridisierungssonden
Amplifikation der quantitativen Standardreihen am LightCycler
Detektion der PCR-Produkte am LightCycler
Mit Antikörpern geblockte Taq- versus herkömmliche Taq-Polymerase
Variation der LightCycler-Messungen bei verdünnten Proben von GAPDH
Veränderungen der mukosalen Zytokin-mRNA-Expression von HIV-infizierten
Patienten unter HAART versus Kontrollpersonen 44
45
46
46
47
48
51
54
56
57
5.0 Diskussion 62
5.1.
5.2
Diskussion der Methoden
Mukosale Zytokin-mRNA-Expression ... 62
65
Zusammenfassung 69
Literaturverzeichnis 71Die intestinale Mukosa ist für die Pathogenese der HIV-Infektion von
besonderer Bedeutung. Hier findet eine hohe HIV-Replikation und ein schneller
CD4+T-Zellverlust statt. Die Ursachen hierfür sind bisher unbekannt. Lokale
Zytokine könnnen hierbei eine besondere Rolle spielen. Ziele dieser Arbeit
waren daher a) die Bestimmung der Expression mukosaler Zytokine, die für die
HIV-Replikation von Bedeutung sind und b) die Erfassung von Veränderungen der
Zytokinexpression unter HAART. Hierfür wurde eine Methode entwickelt, die es
erlaubt, aus geringen Mengen bioptischen Untersuchungsmaterials Zytokin-
Expressionsmuster zu analysieren. Mittels Echtzeit-RT-PCR wurde in
Sigmabiopsien von 7 Kontrollpersonen und zehn HIV- infizierten Patienten vor,
sowie einen, vier und neun Monate nach Einleitung einer HAART die Zytokin-
mRNA-Expression von IL-2, IL-4, IL-6, IL-10, IL-16, IFN-γ, TNF-α, CCL3 und
CCL5 basierend auf der LightCycler-Technik mit spezifischen Hybridisierungs-
Detektionssonden gemessen und zur mRNA-Expression des Housekeeping-Gens GAPDH
in Beziehung gesetzt. Im Vergleich zu Kontrollpersonen zeigten HAART-naive
Patienten eine erhöhte mukosale mRNA-Expression für IL-4, IL-6, IL-10, IFN-?,
TNF-?, CCL3 und CCL5, keine Unterschiede ergaben sich für IL-2 und IL-16.
Diese Befunde zeigen eine erhöhte Aktivierung im mukosalen Immunsystem bei der
HIV-Infektion, die allerdings keinem etablierten Th1- bzw. Th2-Muster
entspricht. Nach Einleitung einer HAART kam es bei allen untersuchten
Patienten zu einem schnellen Anstieg der mukosalen CD4+T-Zellzahl und einem
deutlichen Abfall der mukosalen Viruslast unter die Nachweisgrenze, dennoch
zeigte sich für HIV-infizierte Patienten im Vergleich zu Kontrollen weiterhin
eine erhöhte mukosale mRNA- Expression für IL-4, IL-6, IL-10, IFN-γ, TNF-α,
CCL3 und CCL5. Diese trotz effektiver Inhibition der Virusvermehrung
gesteigerte Aktivierung des mukosalen Immunsystems spricht gegen eine
entscheidende ursächliche Rolle der Virusreplikation oder viraler Antigene für
die mukosale Immunaktivierung. Die hohe Virusreplikation in der intestinalen
Mukosa bei unbehandelten Patienten ist daher eher Folge der gesteigerten
Immunaktivierung, ein Effekt, der gerade für die hoch exprimierten
inflammatorischen Zytokine TNF-α, IFN-γ und IL-6 plausibel erscheint. Die hohe
Expression von CCL3 und CCL5 in Verbindung mit einer hohen HIV-Produktion bei
unbehandelten Patienten deutet darauf hin, dass mögliche HIV- supprimierende
Effekte dieser Zytokine durch die Rekrutierung und Aktivierung potentieller
Zielzellen in der Mukosa aufgehoben werden. Ihre anhaltend hohe Expression
unter HAART könnte weiterhin die schnelle und überschießende Repopulation des
Dickdarms mit CD4+T- Zellen verursachen. HIV-infzierte T-Zellen und
Makrophagen sezernieren inflammatorische Zytokine, die die epitheliale
Barriere schädigen können. Auch nach Elimination des auslösenden Antigens
durch HAART könnte eine solche durch HIV induzierte Barrierestörung über
vermehrten Einstrom luminaler Antigene eine mukosale Entzündung
aufrechterhalten. Ob und zu welchem Zeitpunkt sich die beschriebene
Immunaktivierung unter effektiver Virussuppression zurückbildet, ist derzeit
unklar. Zumindest neun Monate nach effektiver HAART finden sich in der
intestinalen Mukosa eine im Vergleich zu Kontrollen sehr hohe Anzahl von
CD4+T-Zellen und eine hohe Expression inflammatorischer Zytokine, die unter
anderem auch die Expression der HIV-Korezeptoren CCR5 und CXCR4 stimulieren.
Es liegen damit zahlreiche Zielzellen unter für die HIV-Infektion und
-Replikation optimalen Bedingungen vor, die bei Therapieversagen oder
Therapiepausen Ausgangspunkt für einen schnellen und ausgeprägten Rebound des
HIV sein können.Background: Diarrhoea and other gastrointestinal disorders are some of the
most common manifestations of HIV-infection and AIDS. The mucosa-associated
immune system (MALT) pertaining to the gastrointestinal tract probably houses
the largest accumulation of immunocompetent cells in the body. Previous
research has shown that the loss of CD4+T- cells during HIV-infection is much
more pronounced in the mucosa than in the peripheral blood. This may be a
consequence of the high level of viral replication seen in the mucosa. The
reasons for these findings have been unclear. It has been suggested that the
presence of HIV antigen may trigger the production of proinflammatory
cytokines, which results in CD4+T-cell activation making these cells prone to
HIV infection. In this scenario HIV enhances its own replication by
stimulating cytokine production. Objectives: 1.) to quantitate the mRNA
expression of selected proinflammatory, regulatory and HIV-inhibitory
cytokines in the mucosa of HIV-infected patients and to compare it to healthy
controls. 2.) to study the changes in cytokine expression in the course of
highly active antiretroviral therapy (HAART). Methods: HIV-infected patients
underwent endoscopic biopsy of colonic mucosa before and one, four and nine
months after the start of HAART. Healthy volunteers, who underwent a single
endoscopic biopsy served as controls. HIV-RNA and CD4+T-cell counts were
measured in the blood and in the biopsy specimens. Quantitative real time PCR
assays were developed to determine the mRNA expression of TNF-α, IFN-γ, IL-6,
IL-2, IL-4, IL-10, IL- 16, CCL3 and CCL5 in the biopsy specimens. Specific
hybridisation probes were used for the detection of the amplification
products. Cytokine mRNA levels were normalised to mRNA levels of the
housekeeping gene GAPDH. Results: The sensitivity of the RT-PCR assay for each
cytokine and GAPDH was high with a limit of quantification of ten template
copies/capillary. The calibration curve was linear over 5 orders of magnitude
with R2 values > 0,998. For each of the cytokine PCRs the mean efficiency as
expressed by the slope of the standard calibration curve was < 3,7 showing
very little inter-assay variability (C.V. 2% - 14%). The intra-assay precision
was satisfactory with C.V. < 10% throughout the whole calibration range. Nine
HIV-1 infected males and one female were included in the study. The median
(range) age was 42 (27 53). The median (range) plasma HIV RNA and CD4 cell
count at baseline was 4,9 log-10 copies/ml (3,2 6,3) and 210 cells/µl (23
1217) respectively. The control group consisted of four males and three
females with a median (range) age of 56 (48 70). The expression of the
proinflammatory cytokines in the colonic mucosa was significantly higher in
the HIV-infected patients as compared to the healthy controls: median (IQR)
[copies cytokine mRNA/1000 copies GAPDH mRNA]; TNF-?: 1,67 (0,35 3,21) vs.
0,08 (0,06 0,11) p<0,05; IFN-?: 0,11 (0,09 0,72) vs. 0,02 (0,01 0,02)
p<0,05; IL-6: 0,24 (0,14 0,95) vs. 0,01 (0,00 0,01) p<0,05. The expression
level of the regulatory cytokines IL-4 and IL-10 was also higher in the HIV-
infected study population: IL-4: 0,06 (0,03 0,41) vs. 0,01 (0,01 0,02),
p<0,05; IL-10: 0,35 (0,11 0,84) vs. 0,01 (0,01 0,02) p<0,05. Accordingly
the chemokines CCL3 and CCL5 were elevated in the HIV-infected study
population: CCL3: 1,02 (0,69 3,81) vs. 0,11 (0,10 0,35) p<0,05; CCL5:
25,68 (15,24 132,10) vs. 8,80 (6,40 10,72); p<0,05. Despite a dramatic
decline of virus load in both the blood and the mucosa and a rise of
CD4+T-cells in the blood and the mucosa the high level of expression of all
studied cytokines remained unchanged throughout nine months of HAART.
Discussion: With the elimination of the HIV antigen from the mucosa we
expected the expression of proinflammatory cytokines to fall. As cytokine
production remained high despite fully suppressive antiviral therapy factors
other than HIV must be responsible for causing mucosal inflammation. We
suggest that the barrier of the colonic mucosa may have been disrupted earlier
in the course of the infection leading to a continuous influx of luminal
antigen, which maintains the inflammatory response even in the absence of the
offending agent. The rapid repopulation of the mucosa with CD4+T-cells shown
in this study could be explained by the chemotactic properties of CCL3 and
CCL5 whose expression has been shown to be more than ten fold that of
controls. Both the presence of a large number of CD4+T-cells and the continued
high levels of inflammatory cytokines leading to T-cell activation could be
the basis for the explosive virus replication often seen in the case of
treatment interruption or failure
Going Beyond Counting First Authors in Author Co-citation Analysis
The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
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We conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
koamabayili/VECTRON-author-checklist: VECTRON author checklist
We have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
Author-wise bibliometric analysis based on entropy.
Author-wise bibliometric analysis based on entropy.</p
Author Under Sail The Imagination of Jack London, 1893-1902
In Author Under Sail, Jay Williams offers the first complete literary biography of Jack London as a professional writer engaged in the labor of writing. It examines the authorial imagination in London's work, the use of imagination in both his fiction and nonfiction, and the ways he defined imagination in the creative process in his business dealings with his publishers, editors, and agents. In this first volume of a two-volume biography, Williams traverses the years 1893 to 1902, from London's "Story of a Typhoon" to The People of the Abyss. The Jack London who emerges in the pages of Author Under Sail is a writer whose partnership with publishers, most notably his productive alliance with George Brett of Macmillan, was one of the most formative in American literary history. London pioneered many author models during the heyday of realism and naturalism, blurring the boundaries of these popular genres by focusing on absorption and theatricality and the representation of the seen and unseen. London created an impassioned, sincere, and extremely personal realism unlike that of other American writers of the time. Author Under Sail is a literary tour de force that reveals the full range of London as writer, creative citizen, and entrepreneur at the same time it sheds light on the maverick side of machine-age literature.Intro -- Title Page -- Copyright Page -- Dedication -- Contents -- Acknowledgments -- Introduction -- 1. Spirit Truth -- 2. From Absorption to Theatricality and Back Again -- 3. "I Will Build a New Present" -- 4. Sons as Authors -- 5. Fathers as Publishers -- 6. The Daughter as Author -- 7. Lovers as Authors -- 8. At Sea with the Family -- 9. Yellow News, Yellow Stories -- 10. The Return Home -- Notes -- Bibliography -- Index -- About Jay WilliamsIn Author Under Sail, Jay Williams offers the first complete literary biography of Jack London as a professional writer engaged in the labor of writing. It examines the authorial imagination in London's work, the use of imagination in both his fiction and nonfiction, and the ways he defined imagination in the creative process in his business dealings with his publishers, editors, and agents. In this first volume of a two-volume biography, Williams traverses the years 1893 to 1902, from London's "Story of a Typhoon" to The People of the Abyss. The Jack London who emerges in the pages of Author Under Sail is a writer whose partnership with publishers, most notably his productive alliance with George Brett of Macmillan, was one of the most formative in American literary history. London pioneered many author models during the heyday of realism and naturalism, blurring the boundaries of these popular genres by focusing on absorption and theatricality and the representation of the seen and unseen. London created an impassioned, sincere, and extremely personal realism unlike that of other American writers of the time. Author Under Sail is a literary tour de force that reveals the full range of London as writer, creative citizen, and entrepreneur at the same time it sheds light on the maverick side of machine-age literature.Description based on publisher supplied metadata and other sources.Electronic reproduction. Ann Arbor, Michigan : ProQuest Ebook Central, YYYY. Available via World Wide Web. Access may be limited to ProQuest Ebook Central affiliated libraries
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