1,721,010 research outputs found

    Biodiversity of the genus Trichoderma and identification of marker genes involved in the antagonism between Trichoderma spp. and plant pathogenic fungi

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    As Mediterranean islands are known for their high diversity of vascular plants and a high level of endemism, they can provide basic insights into the relationship between geographical patterns and ecological processes. Studying the soil fungus Trichoderma/Hypocrea is of special interest to our working group due to its world-wide distribution, the continuos ongoing identification of new isolates, and its high percentage of strains being effective as biocontrol agents. We isolated 482 strains of Hypocrea/Trichoderma from 15 soils comprising undisturbed and disturbed soil environments. Isolates were identified at the species level by the oligonucleotide BarCode for Hypocrea/Trichoderma, sequence similarity analysis and phylogenetic inferences. The majority of the isolates were positively identified as pan- European and/or pan-global Hypocrea/Trichoderma species from Sections Trichoderma and Pachybasium. T. harzianum (H. lixii) is well known as a biocontrol agent against a range of economically important plant pathogens. In the present study we used a Rapid Subtraction Hybridisation approach to isolate genes which are differentially expressed during mycelial contact between T. harzianum and R. solani, and could serve as marker genes for selection of superior biocontrol strains. The 50 characterised clones comprised proteins involved (i) in protein synthesis and turn-over, (ii) in metabolism, and (iii) in the hydrolysis of macromolecules. An acetyl xylane esterase and an endoglucanase showed significant upregulation during in vivo confrontation of a T. harzianum strain with high antagonistic capability towards R. solani, while the expression was low or absent in a T. harzianum strain with poor antagonistic activity

    Analysis of the interaction of trichodiene synthase 5 (TRI5) with natural and natural-like inhibitors of trichothecene biosynthesis

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    The fungal pathogen Fusarium culmorum causes Fusarium head blight (FHB) on cereals, resulting in yield loss and contamination of grain with type B trichothecene mycotoxins. A key step in the synthesis of trichothecenes is catalyzed by the trichodiene synthase 5 (TRI5) that converts farnesyl pyrophosphate to trichodiene. Ferulic acid proved an efficient inhibitor of type B trichothecene biosynthesis and TRI5 gene expression in Fusarium liquid cultures. In this work several natural and natural-like compounds belonging to phenol and hydroxylated biphenyl structural classes were tested in vitro to determine their inhibitory activity towards TRI5. The recombinant TRI5 was expressed in E. coli, and the interaction with different inhibitors was analyzed by Surface Plasmon Resonance (SPR). The screening of inhibitors was performed in both direct and competitive binding format to determine which inhibitors could compete with the binding of farnesyl pyrophosphate to the enzyme active site. A combination of inhibition kinetics and computational modeling of interacting-structures may facilitate the testing of novel potential TRI5 inhibitors and the prediction of their inhibitory mechanism

    Valutazione della efficacia di un vettore di silenziamento genico per modulare l'espressione dei geniTRI6eTRI5coinvolti nella biosintesi del deossinivalenolo nel fungo fitopatogeno fusarium culmorum

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    Lo scopo di questo studio è stato quello di analizzare l’espressione differenziale di geni preposti alla biosintesi dei tricoteceni (TRI5 e TRI6) e valutare la produzione di micotossina (DON e il suo derivato acetilato 3Acetil DON) in un ceppo selvaggio di Fusarium culmorum e in ceppi mutanti generati per inserzione di un vettore di silenziamento genico

    Straightforward preparation of biologically active dimers of ferulic acid

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    Ferulic acid (4-hydroxy-3-methoxycinnamic acid) is an ubiquitous phenolic compound in plant tissues, and it constitutes a naturally occurring antioxidant compound found in many foods. Here we present different convenient ways to obtain five naturally occurring DiFAs via peroxidase-mediated oxidative coupling reactions or classic cross-coupling oxidations through a sustainable, safe and inexpensive chemistry. Such compounds arise from 5-5’, 8-8’, 8-5’ and 8-O-4’ coupling and some of them have been tested as potential inhibitors of micotoxin productionin vitro
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