1,720,959 research outputs found
Study of wound healing dynamics by single pseudo-particle tracking in phase contrast images acquired in time-lapse
Full text linkCellular contacts modify the way cells migrate in a cohesive group with respect to a free single cell. The resulting motion is persistent and correlated, with cells’ velocities self-aligning in time. The presence of a dense agglomerate of cells makes the application of single particle tracking techniques to define cells dynamics difficult, especially in the case of phase contrast images. Here, we propose an original pipeline for the analysis of phase contrast images of the wound healing scratch assay acquired in time-lapse, with the aim of extracting single particle trajectories describing the dynamics of the wound closure. In such an approach, the membrane of the cells at the border of the wound is taken as a unicum, i.e., the wound edge, and the dynamics is described by the stochastic motion of an ensemble of points on such a membrane, i.e., pseudo-particles. For each single frame, the pipeline of analysis includes: first, a texture classification for separating the background from the cells and for identifying the wound edge; second, the computation of the coordinates of the ensemble of pseudo-particles, chosen to be uniformly distributed along the length of the wound edge. We show the results of this method applied to a glioma cell line (T98G) performing a wound healing scratch assay without external stimuli. We discuss the efficiency of the method to assess cell motility and possible applications to other experimental layouts, such as single cell motion. The pipeline is developed in the Python language and is available upon request
A Key Performance Indicator to Analyze Swarm Learning Performances with EHR
Full text linkSwarm Learning (SL) has been recently proposed for distributed learning, where a group of individual centers perform a synchronized training. Unlike traditional machine learning models that rely on a central server, swarm learning distributes the learning process across multiple nodes. Each node independently processes data and contributes to the overall learning task. This collaboration allows the swarm to benefit from individual nodes' different data. Unlike federated learning, here model parameters are not handled by a central server but are randomly handled across each individual node. The intrinsic attention of swarm learning to data privacy makes it suitable for distributed health care analysis, where a clinical center wants to benefit from all the other ones in the swarm network. However, the benefit for a single center or for the whole network could vary depending on data distribution. In this paper, we want to analyze the performance of the swarm learning in a network with multiple nodes, where different data distribution scenarios are taken into account. This analysis will show the gain of the whole swarm network and a specific (reference) node, focusing on scenarios where this node has a different amount of data with respect to the other nodes. To perform a more analytical analysis, we introduce a new Key Performance Indicator (KPI) to measure such gain. We then applied this method using I CU data extracted from the MIMIC EHR database and discussed the results obtained by analyzing 5 nodes with different data distribution scenarios
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Artificial intelligence-based models for reconstructing the critical current and index-value surfaces of HTS tapes
Full text linkFor modelling superconductors, interpolation and analytical formulas are commonly used to consider the relationship between the critical current density and other electromagnetic and physical quantities. However, look-up tables are not available in all modelling and coding environments, and interpolation methods must be manually implemented. Moreover, analytical formulas only approximate real physics of superconductors and, in many cases, lack a high level of accuracy. In this paper, we propose a new approach for addressing this problem involving artificial intelligence (AI) techniques for reconstructing the critical surface of high temperature superconducting (HTS) tapes and predicting their index value known as n-value. Different AI models were proposed and implemented, relying on a public experimental database for electromagnetic specifications of HTS tapes, including artificial neural networks (ANN), eXtreme Gradient Boosting (XGBoost), and kernel ridge regressor (KRR). The ANN model was the most accurate in predicting the critical current of HTS materials, performing goodness of fit very close to 1 and extremely low root mean squared error. The XGBoost model proved to be the fastest method, with training computational times under 1 s; whilst KRR could be used as an alternative solution with intermediate performance
Variations on the Author
Full text link“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Full text linkWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Early prediction of Autism Spectrum Disorders through interaction analysis in home videos and explainable artificial intelligence
Full text linkThere is considerable discussion about the advantages and disadvantages of early ASD diagnosis. However, the development of easily understandable and administrable tools for teachers or caregivers in order to identify potentially alarming behaviours (red flags) is usually considered valuable even by scholars who are concerned with very early diagnosis. This study proposes an AI pre-screening tool with the aim of creating an easily administrable tool for non-competent observers useful to identify potentially alarming signs in pre-verbal interactions. The use of these features is evaluated using an explainable artificial intelligence algorithm to assess which of the proposed new interaction characteristics were more effective in classifying individuals with ASD vs. controls. We used a rating scale with three core sections - sensorimotor, behavioural, and emotional - each further divided into four items. By seeing home videos of children doing everyday activities, two experienced observers rated each of these items from 1 (highly typical interaction) to 8 (extremely atypical interaction). Then, a machine learning model based on XGBoost was developed for identifying ASD children. The classification obtained was interpreted through the use of SHAP explanations, obtaining an area under the receiver operating curve of 0.938 and 0.914 for the two observers, respectively. These results demonstrated the significance of early detection of body-related sensorimotor features
Dispelling the Myths Behind First-author Citation Counts
Full text linkWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
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