117,403 research outputs found
Regulation of taurine transport in murine macrophages
No full textWe studied the regulation of taurine transport in ANA1 murine macrophage cell line. Taurine uptake was upregulated by hypertonicity and downregulated by bacterial lypopolysaccharide (LPS) and other stimuli leading to macrophage activation. However combined stimulation with LPS plus hypertonic shock evoked an increase of taurine uptake that was even higher than with hypertonic shock alone. Taurine transport was not modified by LPS in GG2EE macrophages derived from C3H/Hej mouse strain, which harbour a mutated Toll-like receptor 4 (TLR4) and thus are not activated by LPS. The extracellular signal-regulated kinase (ERK) inhibitor PD98059 abrogates the effect of both LPS and hyperosmotic shock on ANA1 taurine uptake, while the p38 inhibitor SB203580 reduces the taurine uptake in control conditions and impairs only the response to hypertonicity. These results suggest that the effect of LPS on taurine transport depends on ERK pathway and can be influenced by environmental conditions
Hydrogels Generated from Cyclic Poly(2-Oxazoline)s Display Unique Swelling and Mechanical Properties
No full textCyclic macromolecules do not feature chain ends and are characterized by a higher effective intramolecular repulsion between polymer segments, leading to a higher excluded-volume effect and greater hydration with respect to their linear counterparts. As a result of these unique properties, hydrogels composed of cross-linked cyclic polymers feature enhanced mechanical strength while simultaneously incorporating more solvent with respect to networks formed from their linear analogues with identical molar mass and chemical composition. The translation of topology effects by cyclic polymers into the properties of polymer networks provides hydrogels that ideally do not include defects, such as dangling chain ends, and display unprecedented physicochemical characteristics
Fabrication of Biopassive Surfaces Using Poly(2-alkyl-2-oxazoline)s: Recent Progresses and Applications
No full textPoly(2-alkyl-2-oxazoline)s (PAOXAs) are emerging among the most promising nonionic alternatives to poly(ethylene glycol)s (PEGs), specifically in the modification and functionalization of biomaterials. Due to their chemical tailorability and robustness, coupled to their relatively easy synthesis, PAOXAs are increasingly applied as adsorbates to generate bioinert surfaces that prevent nonspecific contamination by proteins, cells and bacteria. Passivation of medical devices, sensors and cell-sensitive platforms with PAOXAs enables a nearly quantitative suppression of nonspecific biological contamination, while biopassivity is maintained over longer incubation times than those recorded for more degradable PEG-based coatings. Thanks to these unique advantages, surface modification strategies involving PAOXAs are expanding to nanomaterials, especially those applied in the fabrication of nanomedicine and bioimaging tools
An electrogenic amino acid transporter in the apical membrane of cultured human bronchial epithelial cells
No full textWe performed Ussing chamber experiments on cultured human bronchial epithelial cells to look for the presence of electrogenic dibasic amino acid transport. Apical but not basolateral L-arginine (10-1, 000 microM) increased the short-circuit current. Maximal effect and EC50 were approximately 3.5 microA/cm2 and 80 microM, respectively, in cells from normal subjects and cystic fibrosis patients. The involvement of nitric oxide was ruled out because a nitric oxide synthase inhibitor (NG-nitro-L-arginine methyl ester) did not decrease the arginine-dependent current. Apical L-lysine, L-alanine, and L-proline, but not aspartic acid, were also effective in increasing the short-circuit current, with EC50 values ranging from 26 to 971 microM. Experiments performed with radiolabeled arginine demonstrated the presence of an Na+-dependent concentrative transporter on the apical membrane of bronchial cells. This transporter could be important in vivo to maintain a low amino acid concentration in the fluid covering the airway surface
Characterization of a murine gene homologous to the bovine CaCC chloride channel
No full textThe bovine CaCC protein is a putative Ca2+-dependent Cl- channel of airway epithelial cells. Therefore, CaCC proteins could contribute to transepithelial Cl- transport and accordingly modify the phenotype of cystic fibrosis (CF) patients. We have identified a murine EST containing a full-length cDNA coding for a 902-amino-acid protein highly homologous to bovine CaCC. The murine gene (mCaCC) maps to chromosome 3 at the H2-H3 band and is expressed, as indicated by Northern blot analysis, in mouse skin and kidney but not in brain, heart, lung or testis. RT-PCR indicates a low expression in tracheal epithelial cells. Heterologous expression of mCaCC in Xenopus oocytes elicits membrane currents that are anion-selective and inhibited by DIDS and by niflumic acid, a blocker of the endogenous chloride current in oocytes. The identification of genes belonging to the CaCC family will help to evaluate their role as ion channels or channel regulators and their actual contribution to epithelial chloride transport
Going Beyond Counting First Authors in Author Co-citation Analysis
No full textThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Square Dancing with the Stars to Enhance Dynamic Hirschman Linkages?
No full textIn this Presidential Address, the author takes the reader on a reconnaissance of his life and time as a regional scientist. He points out scenery he found scintillating along the way, hoping that some may pick up the banner and chew on a few of the ideas for a while. He suggests a revisit to Albert O. Hirschman’s notion of key sectors and more empirical analysis related to Marcus Berliant’s and Masahisa Fujita’s notion of knowledge creation and transfer.Presidential Address, San Antonio, Texas, March 29, 2014 (53rd Meetings of the Southern Regional Science Association
Appropriate Similarity Measures for Author Cocitation Analysis
No full textWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Parallel file system analysis through application I/O tracing
No full textInput/Output (I/O) operations can represent a significant proportion of the run-time of parallel scientific computing applications. Although there have been several advances in file format libraries, file system design and I/O hardware, a growing divergence exists between the performance of parallel file systems and the compute clusters that they support. In this paper, we document the design and application of the RIOT I/O toolkit (RIOT) being developed at the University of Warwick with our industrial partners at the Atomic Weapons Establishment and Sandia National Laboratories. We use the toolkit to assess the performance of three industry-standard I/O benchmarks on three contrasting supercomputers, ranging from a mid-sized commodity cluster to a large-scale proprietary IBM BlueGene/P system. RIOT provides a powerful framework in which to analyse I/O and parallel file system behaviour—we demonstrate, for example, the large file locking overhead of IBM's General Parallel File System, which can consume nearly 30% of the total write time in the FLASH-IO benchmark. Through I/O trace analysis, we also assess the performance of HDF-5 in its default configuration, identifying a bottleneck created by the use of suboptimal Message Passing Interface hints. Furthermore, we investigate the performance gains attributed to the Parallel Log-structured File System (PLFS) being developed by EMC Corporation and the Los Alamos National Laboratory. Our evaluation of PLFS involves two high-performance computing systems with contrasting I/O backplanes and illustrates the varied improvements to I/O that result from the deployment of PLFS (ranging from up to 25× speed-up in I/O performance on a large I/O installation to 2× speed-up on the much smaller installation at the University of Warwick)
Topology and Molecular Architecture of Polyelectrolytes Determine Their pH-Responsiveness When Assembled on Surfaces
No full textPolymer composition and topology of surface-grafted polyacids determine the amplitude of their pH-induced swelling transition. The intrinsic steric constraints characterizing cyclic poly(2-carboxypropyl-2-oxazoline) (c-PCPOXA) and poly(2-carboxyethyl-2-oxazoline) (c-PCEOXA) forming brushes on Au surfaces induce an enhancement in repulsive interactions between charged polymer segments upon deprotonation, leading to an amplified expansion and a significant increment in swelling with respect to their linear analogues of similar molar mass. On the other hand, it is the composition of polyacid grafts that governs their hydration in both undissociated and ionized forms, determining the degree of swelling during their pH-induced transition
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