1,720,966 research outputs found
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
The degradation of the endocrine disrupting chemical, bisphenol-A : a comparative study between fungal and bacterial laccases
Full text link>Magister Scientiae - MScThe degradation of endocrine disrupting chemicals (EDCs) is a topic of high importance and one that research efforts are continually being focused on. These harmful chemicals are known to cause adverse health effects in humans and animals. In particular, bisphenol-A (BPA), a high volume chemical which is mainly used in the manufacturing of polycarbonate plastics and epoxy resins have been shown to be implicated in the development of a variety of health problems. In this study, the ability of two fungal laccases [Trametes versicolor (TvL) and Trametes pubescens (TpL)], and two bacterial laccases [Streptomyces coelicolor (SLAC), and a mutant of SLAC (SLAC- VN)] to degrade or remove BPA from solution was investigated. The commercial preparation of TvL was used for the purposes of this study, while TpL was produced from the native strain. T. pubescens was cultured in shake-flasks, the supernatant harvested and subjected to ammonium sulphate precipitation. SLAC and SLAC-VN were produced from recombinant strains using a standard protocol and the enzymes purified by size-exclusion chromatography. The presence of the laccases were confirmed by the 2,6-dimethoxyphenol assay and sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE).The removal or degradation of BPA from solution was determined for the free enzymes, as well as the enzymes in immobilised form. For immobilisation, the enzymes were encapsulated in sodium alginate beads and cross-linked to form cross- linked enzyme aggregates (CLEAs).High levels of BPA removal was exhibited by the fungal laccase, TpL (100% removal)and the bacterial mutant laccase, SLAC-VN (96%) in their free form. When all four laccases were encapsulated in sodium alginate beads, a number of changes to the characteristics of the enzymes were observed. Overall, the level of BPA removal was reduced for all enzymes as when compared to the free laccases, while SLAC-VN removed more BPA than either of the fungal laccases (59% for SLAC-VN versus 57% TvL and 54% for TpL). The encapsulation of the laccases in alginate beads also led to changes in the optimal temperature for BPA removal, with all encapsulated laccase being able to remove BPA optimally at 40°C. The immobilisation of the laccases in CLEA form had the most significant effect on the BPA removal ability of the laccases. The pH range for both fungal laccases was extended beyond the acidic range [for TpL, optimal removal occurred at pH 8.5 compared to pH 4.5 (free) and pH 6.0 (encapsulated)]. Most remarkable, however, was that the formation of CLEAs greatly enhanced the BPA removal ability of SLAC (60% removal compared to 25% when encapsulated)
The degradation of the endocrine disrupting chemical, bisphenol-A : a comparative study between fungal and bacterial laccases
No full text>Magister Scientiae - MScThe degradation of endocrine disrupting chemicals (EDCs) is a topic of high importance and one that research efforts are continually being focused on. These harmful chemicals are known to cause adverse health effects in humans and animals. In particular, bisphenol-A (BPA), a high volume chemical which is mainly used in the manufacturing of polycarbonate plastics and epoxy resins have been shown to be implicated in the development of a variety of health problems. In this study, the ability of two fungal laccases [Trametes versicolor (TvL) and Trametes pubescens (TpL)], and two bacterial laccases [Streptomyces coelicolor (SLAC), and a mutant of SLAC (SLAC- VN)] to degrade or remove BPA from solution was investigated. The commercial preparation of TvL was used for the purposes of this study, while TpL was produced from the native strain. T. pubescens was cultured in shake-flasks, the supernatant harvested and subjected to ammonium sulphate precipitation. SLAC and SLAC-VN were produced from recombinant strains using a standard protocol and the enzymes purified by size-exclusion chromatography. The presence of the laccases were confirmed by the 2,6-dimethoxyphenol assay and sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE).The removal or degradation of BPA from solution was determined for the free enzymes, as well as the enzymes in immobilised form. For immobilisation, the enzymes were encapsulated in sodium alginate beads and cross-linked to form cross- linked enzyme aggregates (CLEAs).High levels of BPA removal was exhibited by the fungal laccase, TpL (100% removal)and the bacterial mutant laccase, SLAC-VN (96%) in their free form. When all four laccases were encapsulated in sodium alginate beads, a number of changes to the characteristics of the enzymes were observed. Overall, the level of BPA removal was reduced for all enzymes as when compared to the free laccases, while SLAC-VN removed more BPA than either of the fungal laccases (59% for SLAC-VN versus 57% TvL and 54% for TpL). The encapsulation of the laccases in alginate beads also led to changes in the optimal temperature for BPA removal, with all encapsulated laccase being able to remove BPA optimally at 40°C. The immobilisation of the laccases in CLEA form had the most significant effect on the BPA removal ability of the laccases. The pH range for both fungal laccases was extended beyond the acidic range [for TpL, optimal removal occurred at pH 8.5 compared to pH 4.5 (free) and pH 6.0 (encapsulated)]. Most remarkable, however, was that the formation of CLEAs greatly enhanced the BPA removal ability of SLAC (60% removal compared to 25% when encapsulated)
Variations on the Author
Full text link“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Actinobacteria associated with two diverse soil environments and their multicopper oxidase diversity
No full textPhilosophiae Doctor - PhDThe Cape Floristic Region (CFR) is a biodiverse region boasting unique plant diversity with a rich concentration of endemic plants. Aspalathus linearis (Rooibos) is an indigenous plant that grows in the Clanwilliam region of the Western Cape and is cultivated for its use as an herbal tea. Emerging peatlands in the CFR have gained increasing attention over recent years through research aiming to understand the microbial diversity associated with these environments. Little is known about the actinobacterial diversity of these regions, and as such, it is necessary to investigate the diversity of the actinobacteria associated with these environments, whilst simultaneously gaining knowledge on whether the associated actinobacteria may produce enzymes of biotechnological interest. Two CFR regions (the Rooibos environment – Clanwillian, and the Springfield emerging peatland environment – Agulhas) were explored through culture-based and genomic screening. Metabarcoding analyses using actinobacterial-specific 16S rRNA gene primers showed that the major taxa contributing to the Rooibos environment were members of the families Mycobacteriaceae, Pseudonocardiaceae, Frankiaceae and Geodermatophilaceae. Members of the families Mycobacteriaceaea, Pseudonocardiaceae, Acidimicrobiaceae and Nocardioiaceae was identified as the major taxa for the Springfield environment. Through selective isolation techniques, actinobacteria from rare (underrepresented) genera were isolated, including members of the genera Dactylosporangium, Actinokineospora, Curtobacterium, Modestobacter, Leifsonia and Actinomadura. The top strains, selected based on exhibiting extracellular multicopper oxidase (MCO) activity through culture-based screening, were subjected to whole genome sequence analysis. These rare genera are also vastly underrepresented among 3 400 bacterial MCO sequences found in the Laccase and Multicopper Oxidase Engineering Database (LccED)
Appropriate Similarity Measures for Author Cocitation Analysis
Full text linkWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
Full text linkWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
koamabayili/VECTRON-author-checklist: VECTRON author checklist
No full textWe have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
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