1,721,103 research outputs found
Distinguishing between long-transient and asymptotic states in a biological aggregation model
Get PDFAggregations are emergent features common to many biological systems. Mathematical models to understand their emergence are consequently widespread, with the aggregation–diffusion equation being a prime example. Here we study the aggregation–diffusion equation with linear diffusion in one spatial dimension. This equation is known to support solutions that involve both single and multiple aggregations. However, numerical evidence suggests that the latter, which we term ‘multi-peaked solutions’ may often be long-transient solutions rather than asymptotic steady states. We develop a novel technique for distinguishing between long transients and asymptotic steady states via an energy minimisation approach. The technique involves first approximating our study equation using a limiting process and a moment closure procedure. We then analyse local minimum energy states of this approximate system, hypothesising that these will correspond to asymptotic patterns in the aggregation–diffusion equation. Finally, we verify our hypotheses through numerical investigation, showing that our approximate analytic technique gives good predictions as to whether a state is asymptotic or transient. Overall, we find that almost all twin-peaked, and by extension multi-peaked, solutions are transient, except for some very special cases. We demonstrate numerically that these transients can be arbitrarily long-lived, depending on the parameters of the system
Variations in nonlocal interaction range lead to emergent chase-and-run in heterogeneous populations
Get PDFIn a chase-and-run dynamic, the interaction between two individuals is such that one moves towards the other (the chaser), while the other moves away (the runner). Examples can be found in both interacting cells and animals. Here, we investigate the behaviours that can emerge at a population level, for a heterogeneous group that contains subpopulations of chasers and runners. We show that a wide variety of patterns can form, from stationary patterns to oscillatory and population-level chase-and-run, where the latter describes a synchronized collective movement of the two populations. We investigate the conditions under which different behaviours arise, specifically focusing on the interaction ranges: the distances over which cells or organisms can sense one another’s presence. We find that when the interaction range of the chaser is sufficiently larger than that of the runner—or when the interaction range of the chase is sufficiently larger than that of the run—population-level chase-and-run emerges in a robust manner. We discuss the results in the context of phenomena observed in cellular and ecological systems, with particular attention to the dynamics observed experimentally within populations of neural crest and placode cells
Biological modeling with nonlocal advection–diffusion equations
Get PDFThe employment of nonlocal PDE models to describe biological aggregation and other phenomena has gained considerable traction in recent years. For cell populations, these methods grant a means of accommodating essential elements such as cell adhesion, critical to the development and structure of tissues. For animals, they can be used to describe how the nearby presence of conspecifics and/or heterospecifics influence movement behaviour. In this review, we will focus on classes of biological movement models in which the advective (or directed) component to motion is governed by an integral term that accounts for how the surrounding distribution(s) of the population(s) impact on a member’s movement. We recount the fundamental motivation for these models: the intrinsic capacity of cell populations to self-organise and spatially sort within tissues; the wide-ranging tendency of animals towards spatial structuring, from the formations of herds and swarms to territorial segregation. We examine the derivation of these models from an individual level, illustrating in the process methods that allow models to be connected to data. We explore a growing analytical literature, including methods of stability and bifurcation analysis, and existence results. We conclude with a short section that lays out some future challenges and connections to the modelling of sociological phenomena including opinion dynamics
Going Beyond Counting First Authors in Author Co-citation Analysis
Get PDFThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
Get PDF“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Get PDFWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
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