1,721,082 research outputs found

    Going Beyond Counting First Authors in Author Co-citation Analysis

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    The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed

    Succinic acid production from cheese whey by biofilms of Actinobacillus succinogenes: packed bed bioreactor tests

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    BACKGROUND: Succinic acid (SA) biotechnological production represents a promising alternative to the fossil-fuel based chemical production route. The goal of this study was to develop a SA production process conducted with biofilms of Actinobacillus succinogenes and fed with cheese whey, a lactose-rich by-product of the cheese-making processes. RESULTS: The screening between five commercial biofilm carriers, based on a statistical analysis of the process rates and yields, led to the selection of Glaxstone®, a sintered glass porous material. The attached-cell performances obtained when SA production was fed with cheese whey or with pure lactose were equivalent. The feasibility of a repeated batch process of SA production by biofilms of A. succinogenes was demonstrated in a Glaxstone®-filled 1 L packed bed bioreactor, and an effective sequence of biofilm growth and SA production phases was identified. A SA productivity of 0.72 gSA /(L packed bed h), a SA specific production rate of 0.18 gSA /(g protein h) and a biofilm concentration of about 4 g/ L packed bed were obtained. CONCLUSIONS: SA bioproduction under biofilm conditions from organic by-products such as cheese whey is a feasible and promising process. This work represents the first attempt to develop a biofilm-based process of SA bioproduction from cheese whey. © 2017 Society of Chemical Industry

    Effect of oxygen mass transfer rate on the production of 2,3-butanediol from glucose and agro-industrial byproducts by Bacillus licheniformis ATCC9789

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    Abstract Background 2,3-Butanediol (BD) is a largely used fossil-based platform chemical. The yield and productivity of bio-based BD fermentative production must be increased and cheaper substrates need to be identified, to make bio-based BD production more competitive. As BD bioproduction occurs under microaerobic conditions, a fine tuning and control of the oxygen transfer rate (OTR) is crucial to maximize BD yield and productivity. Very few studies on BD bioproduction focused on the use of non-pathogenic microorganisms and of byproducts as substrate. The goal of this work was to optimize BD bioproduction by the non-pathogenic strain Bacillus licheniformis ATCC9789 by (i) identifying the ranges of volumetric and biomass-specific OTR that maximize BD yield and productivity using standard sugar and protein sources, and (ii) performing a preliminary evaluation of the variation in process performances and cost resulting from the replacement of glucose with molasses, and beef extract/peptone with chicken meat and bone meal, a byproduct of the meat production industry. Results OTR optimization with an expensive, standard medium containing glucose, beef extract and peptone revealed that OTRs in the 7–15 mmol/L/h range lead to an optimal BD yield (0.43 ± 0.03 g/g) and productivity (0.91 ± 0.05 g/L/h). The corresponding optimal range of biomass-specific OTR was equal to 1.4–7.9 mmolO2/gCDW/h{\text{mmol}}_{{{\text{O}}_{2} }} /{\text{g}}_{\text{CDW}} /{\text{h}} mmolO2/gCDW/h , whereas the respiratory quotient ranged from 1.8 to 2.5. The switch to an agro-industrial byproduct-based medium containing chicken meat and bone meal and molasses led to a 50% decrease in both BD yield and productivity. A preliminary economic analysis indicated that the use of the byproduct-based medium can reduce by about 45% the BD production cost. Conclusions A procedure for OTR optimization was developed and implemented, leading to the identification of a range of biomass-specific OTR and respiratory quotient to be used for the scale-up and control of BD bioproduction by Bacillus licheniformis. The switch to a byproduct-based medium led to a relevant decrease in BD production cost. Further research is needed to optimize the process of BD bioproduction from the tested byproduct-based medium

    Parameter estimation algorithms for kinetic modeling from noisy data

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    The aim of this work is to test the Levemberg Marquardt and BFGS (Broyden Fletcher Goldfarb Shanno) algorithms, implemented by the matlab functions lsqnonlin and fminunc of the Optimization Toolbox, for modeling the kinetic terms occurring in chemical processes of adsorption. We are interested in tests with noisy data that are obtained by adding Gaussian random noise to the solution of a model with known parameters. While both methods are very precise with noiseless data, by adding noise the quality of the results is greatly worsened. The semiconvergent behaviour of the relative error curves is observed for both methods. Therefore a stopping criterion, based on the Discrepancy Principle is proposed and tested. Great improvement is obtained for both methods, making it possible to compute stable solutions also for noisy data

    Chloroform aerobic cometabolic biodegradation in a continuous-flow reactor: Model calibration by means of the gauss-newton method

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    Chlorinated solvents are toxic and poorly biodegradable pollutants frequently found in contaminated aquifers. Experimental data of chloroform (CF) aerobic cometabolic biodegradation in a sand column with butane as growth substrate were simulated with a system of non‐stationary second‐order partial differential equations with non‐linear kinetic terms. A MATLAB optimization code based on the Gauss‐Newton method and coupled with the Comsol Multiphysics finite elements solver was developed to calibrate the model. For each experimental phase, the best‐fit quality was evaluated by an innovative multi‐variable model adequacy test. The proposed code solved systems of up to 5 partial differential equations and optimized up to 6 unknown parameters, leading to statistically acceptable best‐fits. The optimization of the butane/oxygen pulsed feed led to an 82 % CF biodegradation and to a 0.27 gCF/gbutane transformation yield. When the substrate/pollutant ratio was minimized, the standard model of aerobic cometabolism initially tested required additional terms aimed at taking into account the depletion of reducing energy, in order to attain a statistically acceptable best‐fit. This is the first work in which a model of aerobic cometabolism taking into account reducing energy availability was applied to a continuous‐flow process. The proposed optimization code can be used for model calibration in a wide range of physical problems described by non‐stationary, non‐linear partial differential equations, a task that no commercial software can perform. The developed code is made available in the Supplementary Material

    Variations on the Author

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    “Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship

    Aerobic cometabolism of 1,1,2,2-tetrachloroethane by Rhodococcus aetherivorans TPA grown on propane: kinetic study and bioreactor configuration analysis

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    BACKGROUND 1,1,2,2-tetrachloroethane (TeCA) has been generally considered as non-biodegradable under aerobic conditions, while its complete biodegradation was reported with microbial consortia growing anaerobically. This study describes TeCA aerobic co-metabolic degradation by the propanotroph Rhodococcus aetherivorans strain TPA isolated from a TeCA-degrading consortium. RESULTS R. aetherivorans TPA was able to grow on aliphatic hydrocarbons from propane to pentane and on gaseous n-alkane metabolic intermediates. The Michaelis–Menten model allowed a satisfactory fit of the TPA propane utilization rates under resting cell conditions, while the TeCA degradation rates were successfully interpolated with Andrew's inhibition model. A significant propane–TeCA mutual inhibition was observed, although the results did not allow distinguishing between competitive and non-competitive inhibition. Among different bioreactor options for the on-site bioremediation of TeCA-contaminated groundwater, a single suspended-cell continuous stirred-tank reactor (CSTR) appeared to be the optimal one. CONCLUSIONS This study provides for the first time the kinetic and microbiological characterization of a bacterial strain capable of degrading TeCA under aerobic conditions

    Appropriate Similarity Measures for Author Cocitation Analysis

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    We provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis

    Cometabolic treatment of chlorinated solvents: influence of operational conditions on the adaptation of indigenous biomasses

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    The effect of several operational conditions on the adaptation of indigenous biomasses was investigated in a microcosms study of chloroform (CF) cometabolic degradation with butane. The objective was to minimize the duration of the adaptation phase and the amount of growth substrate to provide in field applications. The adaptation to butane and CF was monitored at 5 concentrations of butane (1.50, 1.00, 0.50, 0.25 and 0.10 mg/L), at 3 concentrations of CF (1, 5 and 10 mg/L), at 4 temporal sequences of exposition to butane (continuous, 5 h/d, 7 h/d, 24 h every other day) and at 3 temperatures (15, 25 and 30°C). The results indicate that the most favorable condition for the adaptation of indigenous biomasses consists in the continuous exposition to a very low concentration of growth substrate (0.1 mg/L). In all the tests the degradation of CF started within 48 days. The microbiological characterization of the consortia indicated that the prolonged degradation of CF led to the selection of 3 specific butane-utilizing strains
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