1,721,061 research outputs found
Alpha-synuclein nanodroplet models
No full textData behind the open-access publication titled "Theoretical Methods for Assessing the Density of Protein Nanodroplets" by Midhun Mohan Anila, Michał Wojciechowski, Mateusz Chwastyk, and Bartosz Różycki. [Reference: International Journal of Molecular Sciences 26(17): 8631, 2025, https://doi.org/10.3390/ijms26178631]. For details, see the text file "readme.txt" in the ZIP archive.</p
Data from molecular dynamics simulations of galectin-3 with the Martini 3 force field
No full textThis dataset is a source for the open-access publication titled "Scrutinising the Conformational Ensemble of the Intrinsically Mixed-Folded Protein Galectin-3" by Midhun Mohan Anila, Pawel Rogowski and Bartosz Rozycki (https://doi.org/10.3390/molecules29122768). File "readme.txt" included in the zip archive contains information on how the data is organized.</p
Results of DPD simulations and interfacial energy calculations demonstrating membrane curvature sensing by model biomolecular condensates
No full textData behind all figures in publication "Membrane curvature sensing by model biomolecular condensates" by Midhun Mohan Anila, Rikhia Ghosh and Bartosz Rozycki. Reference: Soft Matter 19(20): 3723-3732 (2023).ZIP archive contains sub-folders. The sub-folder names indicate the figure number. Each of the sub-folders contains a text file (readme.txt) explaining the sub-folder content as well as a gnuplot file used to generate the given figure. </p
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Results of all-atom and coarse-grained molecular dynamics simulations of the ORD domain of the lipid-transport protein ORP8
No full textData generated in all-atom and coarse-grained molecular dynamics simulations which provide the source for the open access article titled "Crystal Structure of the ORP8 Lipid Transport ORD Domain: Model of Lipid Transport" by Andrea Eisenreichova, Martin Klima, Midhun Mohan Anila, Alena Koukalova, Jana Humpolickova, Bartosz Różycki and Evzen Boura. Reference: Eisenreichova et al. Cells 12(15), 1974, 2023, https://doi.org/10.3390/cells12151974.</p
Variations on the Author
Full text link“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Full text linkWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
Full text linkWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
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