1,720,954 research outputs found
Computational Investigation of the Role of 3D Genome Architecture in the Lifecycle of the Malaria Parasite
No full textMalaria, a mosquito-borne infectious disease caused by the Plasmodium parasite, is responsible for more than a half a million deaths per year, the vast majority of which occur in central Africa. The parasite undergoes an incredibly complex cell molecular transformation as it transitions from living in mosquitoes to living in humans with different sets of genes being activated or silenced in order to evade the immune system of the host. Understanding how its genome guides this transition is critical for developing adequate treatments. In this project, we aim to develop a computational framework for investigating the role of the three dimensional (3D) DNA architecture in enabling the expression of virulence genes. We use recently and newly acquired data of DNA-DNA and long non-coding RNA-DNA interactions to create a genome interaction map. We plan to employ a diffusion kernel algorithm to highlight clusters of interacting virulence genes and computationally build a background model to statistically assess the importance of lncRNAs. Our work lays the foundations for further systematic analyses of changes in 3D parasite genome conformation during its complex lifecycle
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
Full text link“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Full text linkWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
Full text linkWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
Deploying a Distributed Cloud-based Microservice Application Benchmark Suite
Full text linkCloud services have lately transitioned from a single monolithic application to several loosely coupled microservices. This design shift from a single complex monolithic application to tens or hundreds of single-purpose microservices has enabled modern cloud services to be deployed, scaled, and managed in a more efficient way. Microservices can be deployed inside their own lightweight containers hosted on a cloud platform, and they can be individually developed, updated, tested, and elastically scaled. Each microservice can also be developed in its own suitable language, with only a common API for microservices to communicate with each other. Due to these benefits, large cloud providers and services such as Amazon, Apple, Netflix, and Twitter have adopted the microservice architecture model in recent years. In this project, we will study and deploy a known distributed cloud service benchmark suite that is representative of a real industrial application with tens of microservices hosted on multiple cloud virtual machines. This suite covers a broad spectrum of popular cloud services such as social networking service, media service and an e-commerce service. Each service consists of multiple microservices that use different languages, programming models and open-source frameworks. The microservices will communicate using RESTful APIs and will enable simulating user traffic flow through a load generator tool. The final project outcome will generate a modular and extensible distributed microservice application suite that is deployed on a popular cloud platform and can be used by faculty members and students for performance debugging and simulating a practical representative industrial cloud service
koamabayili/VECTRON-author-checklist: VECTRON author checklist
No full textWe have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
Author-wise bibliometric analysis based on entropy.
No full textAuthor-wise bibliometric analysis based on entropy.</p
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