1,720,980 research outputs found
Going Beyond Counting First Authors in Author Co-citation Analysis
Get PDFThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
[CODE] carpentries-lab/good-enough-practices: v1.0 Lesson after Carpentries Lab acceptance, as submitted to JOSE
No full textversion 1.0 Lesson after Carpentries Incubator review Also after Carpentries Lab acceptance As submitted to Journal of Open Source Education for publicationEdward Wallace, Tomasz Zielinski, Emma Wilson, Matthias Mimault, Allen Lee, aromanowski, Samuel Joseph Haynes, Toby Hodges, Zhian N. Kamvar, Flic Anderson, Graeme Grimes, JenDaub, Lex Nederbragt, jjyh, & Toni Mey. (2024). carpentries-lab/good-enough-practices: v1.0 Lesson after Carpentries Lab acceptance, as submitted to JOSE (v1.0). Zenodo. https://doi.org/10.5281/zenodo.1078302
Variations on the Author
Get PDF“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Get PDFWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
pacbio_explained
No full text<p>Figure(s) explaining certain aspects of PacBio reads and analysis thereof. Free to reuse!</p>
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<p>Thanks go to Keith Robison @OmicsOmicsBlog and Henri van de Geest @geesthc for suggestions that improvemed the preassembly figure.<br><br></p>
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Genomic variation detection in Atlantic cod using long reads
No full textSlides of the presentation I gave at the SMRT Scientific Symposium, Leiden, The Netherlands on June 6, 2016<br
Learning from the Carpentries
No full textMy keynote presentation for CarpentryConnect Manchester June 25-27, 201
Active learning strategies for bioinformatics teaching
No full text<p>Poster I presented at </p>
<p>”FEBS-IUBMB WORKSHOP ON EDUCATION IN MOLECULAR LIFE SCIENCES”, Oslo, 18 – 19 Sept 2015.</p>
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<p>See also my blog post on the same subject: https://flxlexblog.wordpress.com/2015/08/31/active-learning-strategies-for-bioinformatics-teaching-2</p
developments in NGS
No full textSummarises the developments in (next generation) sequencing. The data is based on the throughput metrics for the different platforms since their first instrument version came out.The figures visualise the results by plotting throughput in raw bases versus read length. Unless stated otherwise, released under a CC BY license.
Blog post about the current version: https://flxlexblog.wordpress.com/2016/07/08/developments-in-high-throughput-sequencing-july-2016-edition/Blog posts about the previous editions:https://flxlexblog.wordpress.com/2015/06/17/developments-in-high-throughput-sequencing-june-2015-edition/June 2014: http://flxlexblog.wordpress.com/2014/06/11/developments-in-next-generation-sequencing-june-2014-edition/
October 2013 : http://flxlexblog.wordpress.com/2013/10/01/developments-in-next-generation-sequencing-october-2013-edition/
December 2012: http://flxlexblog.wordpress.com/2012/12/03/developments-in-next-generation-sequencing-a-visualisation/</p
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