323,293 research outputs found
A POU homeo domain protein related to dPOU-19/pdm-1 binds to the regulatory DNA necessary for vital expression of the Drosophila choline acetyltransferase gene
No full textExpression of the choline acetyltransferase (ChAT) gene in Drosophila melanogaster is responsible for production of the neurotransmitter acetylcholine and is necessary for viability. In previous studies, we have shown that the regulatory region for normal ChAT expression is large and composed of multiple regulatory elements (Kitamoto et al., 1992; Kitamoto and Salvaterra, 1993). In this study, using various lengths of 5′ flanking DNA fused to wild type ChAT cDNA, we have defined a 0.3 kilobase (kb) region of the cis-regulatory DNA, which is essential for restoring viability of Cha lethal mutants. DNase I footprinting analysis of this 0.3 kb DNA revealed a protected 22 bp sequence that contains an octamer-like motif (ATTCAAAT) with one base difference from the consensus octamer motif (ATGCAAAT). Electrophoretic mobility shift assays and Southwestern blot analysis confirmed the presence of specific binding factor(s) for the 22 bp sequence in embryo nuclear extracts, and competition studies established the importance of the octamer-like motif for high-affinity binding. Using the 22-mer as a probe, we have isolated a cDNA clone encoding the Drosophila POU homeo domain protein, dPOU-19/pdm-1, whose target genes and specific binding sequences have not been identified. We propose that vital expression of the Drosophila ChAT gene is regulated by a member of the dPOU-19/pdm-1 putative transcription factor family.</jats:p
History and state of the art of PrP-res “typing” in Creutzfeldt-Jakob disease
No full textMuch progress has been made in understanding the molecular basis of phenotypic variability in Creutzfeldt-Jakob disease (CJD) in the last ten years. The most significant advance was the discovery that the genotype at polymorphic codon 129 of PRNP and the “type” of the protease-resistant prion protein fragment, PrP-res, have a major influence on the disease phenotype in all forms of CJD, irrespective of their etiology. The most widely accepted CJD classification includes six clinico-pathological phenotypes and two major types of PrP-res, types 1 and 2, which can be distinguished on the basis of a ∼2 kDa difference in relative molecular mass of the protein fragment. However, alternative classifications of human PrP-res types distinguished three patterns of PrP-res molecular mass instead of two, thereby creating significant confusion in the field. Fortunately, progress has been recently made in clarifying these disparities. Most significant in this regard, has been the finding that pH variation among CJD brain homogenates in standard buffers influences the size of PrP-res. Thus, some of the PrP-res heterogeneity used to identify putative strain-specific PrP-res types simply represents a technical “artefact” related to the experimental conditions. On the other hand, recent data have also shown that PrP-res types 1 and 2 are heterogeneous biological species, which can be further distinguished into molecular subtypes that fit the current histopathological classification of sporadic CJD in 6 subtypes. Finally, novel truncated PrP-res fragments of smaller size than PrP-res types 1 and 2 have recently been identified in CJD. Although more studies are needed to fully characterize the presence, characteristics and biological significance of these peptides, preliminary results indicate that their search and characterization may be useful in the molecular diagnostics of CJD subtypes
Diffusive author(s), cohesive author: Analysis of S/N (1994)
No full textThis study indicates the ways in which various aspects of the author(s) are brought forth in Dumb type’s performance art, the S/N production. Previous research has suggested a non-hierarchical organization of Dumb type and the absence of a “privileged author” in Dumb type’s collaborative work, S/N. However, the results that I have investigated from member’s interviews on the creative process of S/N along with my analysis of the recorded images of S/N, indicate a different aspect of the author(s). First, S/N was created through, so to speak, the collective ideas of the members of Dumb type. Further, S/N has at least nine quotations from previous performances, installations, and printed writings, besides the work-in-progress technique. Explicating one of the “author functions” as given by Michel Foucault, each text has plural subjects of the author. However, it has been revealed from members’ interviews that Teiji Furuhashi had a decision-making role in selecting the members’ ideas within the performance. Since then, S/N has had plural subjects of creation; however, Furuhashi is one of the subjects of creation along with the “privileged author.” S/N has plural authors (diffusive authors) yet at the same time, it has a “privileged author,” Teiji Furuhashi (cohesive author)
Going Beyond Counting First Authors in Author Co-citation Analysis
No full textThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Relations between x-ray timing features and spectral parameters of galactic black hole x-ray binaries
No full textWe present a study of correlations between spectral and timing parameters for a sample of black hole X-ray binary candidates. Data are taken from GX
339-4, H 1743-322, and XTE J1650-500, as the Rossi X-ray Timing Explorer
(RXTE) observed complete outbursts of these sources. In our study we investigate outbursts that happened before the end of 2009 to make use of the high-energy coverage of the HEXTE detector and select observations that
show a certain type of quasi-periodic oscillations (type-C QPOs). The spectral parameters are derived using the empirical convolution model simpl to model the Comptonized component of the emission together with a disc blackbody for the emission of the accretion disc. Additional spectral features, namely a reflection component, a high-energy cut-off, and excess emission at 6.4 keV, are taken into account. Our investigations confirm the known positive
correlation between photon index and centroid frequency of the QPOs and reveal an anti-correlation between the fraction of up-scattered photons and the QPO frequency. We show that both correlations behave as expected in the “sombrero”
geometry. Furthermore, we find that during outburst decay the correlation between photon index and QPO frequency follow a general track, independent of individual outbursts
Synthesis of multifunctional clustered nano-Fe3O4 chitosan nanocomposite for biomedical applications
No full text
Dispelling the Myths Behind First-author Citation Counts
No full textWe conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
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