1,721,021 research outputs found
Replication Data for: Recent sequence variation in probe binding site affected detection of respiratory syncytial virus group B by real-time RT-PCR
No full textThis dataset comprises of Nucleotide sequences used to match primers and probes, and for phylogenetic inferences. A total of 168 N and G gene sequences deposited in Genbank with accession numbers from KX775772 - KX775940. This data is freely available. In our analysis, we observed inconsistencies between two routine RSV diagnostic methods applied in our labs, one method utilizes immunofluorescence microscopy and other molecular probes, and set out to determine.
Sequence data cleaning and contig assembly was done using Sequencher program v.5.1; sequence alignment done using MAFFT v.1.8; phylogenetic inferences done in MEGA v1.6; custom BLAST of the primers and probes done using geneious v8.1.8 </p
Replication Data for: Whole genome sequencing and phylogenetic analysis of Human metapneumovirus strains from Kenya and Zambia
No full textReplication dataset for plotting Figure 2 and Supplementary Figure 2: The average pairwise identities were calculated using the sequence data described in the article in Geneious R8.1.5 (https://www.geneious.com). The plots were done in R 3.5.3. </p
Replication Data for: Whole genome sequencing and phylogenetic analysis of Human metapneumovirus strains from Kenya and Zambia
No full textReplication dataset for plotting Figure 2 and Supplementary Figure 2: The average pairwise identities were calculated using the sequence data described in the article in Geneious R8.1.5 (https://www.geneious.com). The plots were done in R 3.5.3. </p
Replication Data for: Recent sequence variation in probe binding site affected detection of respiratory syncytial virus group B by real-time RT-PCR
No full textThis dataset comprises of Nucleotide sequences used to match primers and probes, and for phylogenetic inferences. A total of 168 N and G gene sequences deposited in Genbank with accession numbers from KX775772 - KX775940. This data is freely available. In our analysis, we observed inconsistencies between two routine RSV diagnostic methods applied in our labs, one method utilizes immunofluorescence microscopy and other molecular probes, and set out to determine.
Sequence data cleaning and contig assembly was done using Sequencher program v.5.1; sequence alignment done using MAFFT v.1.8; phylogenetic inferences done in MEGA v1.6; custom BLAST of the primers and probes done using geneious v8.1.8 </p
Replication Data for: Respiratory Syncytial Virus genotype BA in Kilifi, Kenya: evolutionary dynamics, 15 years on
No full textThis study is part of a longitudinal surveillance study established to understand the epidemiology and disease burden of RSV associated pneumonia admissions to Kilifi County Hospital (KCH). Fields available in the data include month and year of sample collection, Eligibles (Under fives with severe or very severe pneumonia), RSVA and RSVB positives, proportion tested, and FUBAR all sequences output.</p
Replication Data for: Genomic epidemiology and evolutionary dynamics of respiratory syncytial virus group B in Kilifi, Kenya, 2015-17
No full textReplication datasets of the KHDSS RSVB genomes paper. This dataset includes, excel datasheets, sequence alignments and BEAST xml files, which can be used to replicate the analysis and figures described in the paper.
The data is part of the KHDSS study conducted to investigate surveillance of respiratory viruses in outpatient setting (KHDSS) </p
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
Full text link“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
Full text linkWe provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
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