1,720,980 research outputs found
Color discrimination properties arising from optimal decoding in the early stages of visual systems
No full textIn order to interpret animal behavior we need to understand how they see the world. As directly testing color discrimination in animals is difficult and time consuming, it is important to develop theoreticalmodels based in the properties of visual systems. One of the most successful for the prediction of color discrimination behavior is the receptor noise-limited (RNL) model, which depends only on the level ofnoise in photoreceptors and opponent mechanisms. Here a complementary approach to model construction is used, and optimal color discrimination properties are obtained using information theoretical tools, for the early stages of visual systems. It is shown here that, for most biologically relevant conditions the optimal discrimination function of an ideal observer coincides with the one obtained with the RNL model. Furthermore, within this framework the influence of opponency can be studied by considering models with and without that mechanism but with exactly the same parameters at the level of photoreceptors. As an example, it is shown here that opponency is necessary to explain the discrimination of monochromatic stimuli in honeybees, but not in budgerigars. Since this is a consequence of the narrowing of absorption spectra of photoreceptors, produced by the presence of oil droplets, this could also be true for most other species of birds. This suggests that in order to study opponency in birds, stimuli should have a relatively wide spectrum.Fil: Risau Gusman, Sebastian Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte; Argentina. Comisión Nacional de Energía Atómica. Centro Atómico Bariloche; Argentin
Effects of time-delayed feedback on the properties of self-sustained oscillators
Get PDFMost self-sustained oscillations in biological systems and in technical applications are based on a feedback loop, and it is usually important to know how they will react when an external oscillatory force is applied. Here we investigate the effects that the introduction of a time delay in the feedback can have in the entrainment properties of self-sustained oscillators. To do this, we derive analytic expressions for the periodic trajectories and their asymptotic stability, for a generic external oscillatory force. This allows us to show that, for large quality factors, the resonance frequency does not depend on the feedback delay. When the external force is harmonic, it is shown that the largest entrainment range does not correspond to the time delay that gives the maximal response of the unforced oscillator. In fact, that delay gives the shortest entrainment range.Fil: Risau Gusman, Sebastian Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte; Argentina. Comisión Nacional de Energía Atómica. Centro Atómico Bariloche; Argentin
Influence of network dynamics on the spread of sexually transmitted diseases
Get PDFNetwork epidemiology often assumes that the relationships defining the social network of a population are static. The dynamics of relationships is only taken indirectly into account by assuming that the relevant information to study epidemic spread is encoded in the network obtained, by considering numbers of partners accumulated over periods of timeroughly proportional to the infectious period of the disease. On the other hand, models explicitly including social dynamics are often too schematic to provide a reasonable representation of a real population, or so detailed that no general conclusions can be drawn from them. Here, wepresent a model of social dynamics that is general enough so its parameters can be obtained by fitting data from surveys about sexual behaviour, but that can still be studied analytically, using mean-field techniques. This allows us to obtain some general results about epidemic spreading. We show that using accumulated network data to estimate the static epidemic threshold lead to a significant underestimation of that threshold. We also show that, for a dynamic network, the relative epidemic threshold is an increasing function of the infectious period of the disease, implying that the static value is a lower bound to the real threshold. A practical example is given of how to apply the model to the study of a real population.Fil: Risau Gusman, Sebastian Luis. Comisión Nacional de Energía Atómica. Gerencia del Área de Investigación y Aplicaciones No Nucleares. Gerencia de Física (Centro Atómico Bariloche); Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte; Argentin
Epidemic thresholds for bipartite networks
Get PDFIt is well known that sexually transmitted diseases (STD) spread across a network of human sexual contacts. This network is most often bipartite, as most STD are transmitted between men and women. Even though network models in epidemiology have quite a long history now, there are few general results about bipartite networks. One of them is the simple dependence, predicted using the mean field approximation, between the epidemic threshold and the average and variance of the degree distribution of the network. Here we show that going beyond thisapproximation can lead to qualitatively different results that are supported by numerical simulations. One of the new features, that can be relevant for applications, is the existence of a critical value for the infectivity of each population, below which no epidemics can arise, regardless of the value of the infectivity of the other population.Fil: Hernandez, Damián G.. Comision Nacional de Energia Atomica. Gerencia del _rea de Energía Nuclear. Instituto Balseiro; Argentina;Fil: Risau Gusman, Sebastian Luis. Comision Nacional de Energia Atomica. Gerencia del Area Investicaciones y Aplicaciones No Nucleares; Argentina
A Mathematical Model of Communication between Groups of Circadian Neurons in Drosophila melanogaster
Get PDFIn the fruit fly, circadian behavior is controlled by a small number of specialized neurons, whose molecular clocks are relatively well known. However, much less is known about how these neurons communicate among themselves. In particular, only 1 circadian neuropeptide, pigment-dispersing factor (PDF), has been identified, and most aspects of its interaction with the molecular clock remain to be elucidated. Furthermore, it is speculated that many other peptides should contribute to circadian communication. We have developed a relatively detailed model of the 2 main groups of circadian pacemaker neurons (sLNvs and LNds) to investigate these issues. We have proposed many possible mechanisms for the interaction between the synchronization factors and the molecular clock, and we have compared the outputs with the experimental results reported in the literature both for the wild-type and PDF-null mutant. We have studied how different the properties of each neuron should be to account for the observations reported for the sLNvs in the mutant. We have found that only a few mechanisms, mostly related to the slowing down of nuclear entry of a circadian protein, can synchronize neurons that present these differences. Detailed immunofluorescent recordings have suggested that, whereas in the mutant, LNd neurons are synchronized, in the wild-type, a subset of the LNds oscillate faster than the rest. With our model, we find that a more likely explanation for the same observations is that this subset is being driven outside its synchronization range and displays therefore a complex pattern of oscillation.Fil: Risau Gusman, Sebastian Luis. Comisión Nacional de Energía Atómica. Centro Atómico Bariloche; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Gleiser, Pablo Martin. Comisión Nacional de Energía Atómica. Centro Atómico Bariloche; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin
Modelling the effect of phosphorylation on the circadian clock of Drosophila
Get PDFIt is by now well known that, at the molecular level, the core of the circadian clock of most living species is a negative feedback loop where some proteins inhibit their own transcription. However, it has recently been shown that post-translational processes, such as phosphorylations, are essential for a correct timing of the clock. Depending on which sites of a circadian protein are phosphorylated, different properties such as degradation, nuclear localization and repressing power can be altered. Furthermore, phosphorylation domains can be related in a positive way, giving rise to consecutive phosphorylations, or in a negative way, hindering phosphorylation at other domains. Here we present a simple mathematical model of a circadian protein having two mutually exclusive domains of phosphorylation. We show that the system has limit cycles that arise from a unique fixed point through a Hopf bifurcation. We find a set of parameters, with realistic values, for which the limit cycle has the same period as the wild type circadian oscillations of the fruit fly. The domains act as a switch, in the sense that alterations in their phosphorylation can alter the period of circadian oscillation in opposite ways, increasing or decreasing the period of the wild type oscillations. In particular, we show that our model is able to reproduce some of the experimental results found for switch-like phosphorylations of the . PER protein of the circadian clock of the fly .Fil: Risau Gusman, Sebastian Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte; Argentina. Comisión Nacional de Energía Atómica. Gerencia del Área de Investigación y Aplicaciones No Nucleares. Gerencia de Física (Centro Atómico Bariloche); ArgentinaFil: Gleiser, Pablo Martin. Comisión Nacional de Energía Atómica. Gerencia del Área de Investigación y Aplicaciones No Nucleares. Gerencia de Física (Centro Atómico Bariloche); Argentina. Comisión Nacional de Energía Atómica. Gerencia del Área de Energía Nuclear. Instituto Balseiro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte; Argentin
Understanding the Lévy Ratchets in Terms of Lévy Jumps
Get PDFWe investigate the overdamped dynamics of a particle in a spatially periodic potential with broken reflection symmetry and subject to the action of a symmetric white Lévy noise. The system (referred to as the Lévy ratchet) has been previously studied using both Langevin and fractional Fokker–Planck formalisms, with the main find being the existence of a preferred direction of motion toward the steepest slope of the potential, producing a non-vanishing current. In this contribution we develop a semi-analytical study combining the Fokker–Planck and Langevin formalisms to explore the role of Lévy flights on the system dynamics. We analyze the departure positions of Lévy jumps that take the particle out of a potential well as well as the rates and lengths of such jumps, and we study the way in which long jumps determine the non-vanishing current. We also discuss the essential difference from the Gaussian-noise case (producing no current). Finally we study the current for different potential shapes as a function of the amplitude of the potential barrier. In particular, we show that standard Lévy ratchets produce a non-vanishing current in the infinite-barrier limit. This latter counterintuitive result can be easily understood in terms of the long Lévy jumps and analytically demonstrated.Fil: Ibáñez, Santiago Agustín. Comision Nacional de Energia Atomica. Gerencia del Area de Investigaciones y Aplicaciones no Nucleares. Gerencia de Fisica (CAB); Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Risau Gusman, Sebastian Luis. Comision Nacional de Energia Atomica. Gerencia del Area de Investigaciones y Aplicaciones no Nucleares. Gerencia de Fisica (CAB); Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Bouzat, Sebastian. Comision Nacional de Energia Atomica. Gerencia del Area de Investigaciones y Aplicaciones no Nucleares. Gerencia de Fisica (CAB); Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin
Directed transport induced by α-stable Lévy noises in weakly asymmetric periodic potentials
Get PDFWe study the motion of a particle in spatially periodic potentials with broken mirror symmetry under the influence of white α-stable Lévy noises. We consider both time-independent and fluctuating potentials. We focus on cases in which the spatial asymmetry of the potential is due not to a difference between the distances from an absolute minimum to the absolute maximum on its left and to the absolute maximum on its right but only to the curvatures of the potential profiles. The analysis is performed using the fractional Fokker-Planck formalism. Consistent results from Langevin simulations are also presented. We analyze the influence of the symmetry properties of the potentials in combination with the fluctuating characteristics of the system in the determination of the current. We find different situations in which both the absolute value and the direction of the current depend not only on the properties of the potential but also on the parameters characterizing the α-stable Lévy noise. Among other features, we analyze the case of supersymmetric potentials. In particular, we show that a static supersymmetric potential produces no current, and we analyze the conditions for observing a nonvanishing current when the potential fluctuates between different supersymmetric profiles.Fil: Risau Gusman, Sebastian Luis. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Comisión Nacional de Energía Atómica. Centro Atómico Bariloche; ArgentinaFil: Ibáñez, Santiago Agustín. Comisión Nacional de Energía Atómica. Centro Atómico Bariloche; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Bouzat, Sebastian. Comisión Nacional de Energía Atómica. Centro Atómico Bariloche; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin
Going Beyond Counting First Authors in Author Co-citation Analysis
Get PDFThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
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