177,480 research outputs found

    Supplement 2 for Goring et al. in press, data and R Markdown

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    <p>Supplement 2 for Goring et al., in press.  The file contains all the data and code required to run the R markdown version of the paper.  The supplement also includes a compiled HTML document reflecting the final version of the paper.  Because of data use agreements the code included here will not generate numerically identical results since the plant data file here is only 30% of the size of the actual database, and the locations are jittered.</p

    neotoma - an R package for the Neotoma Paleoecological Database

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    <p>Current Version - 1.2-0.</p> <p>An R package to allow users to interface with the Neotoma Paleoecological Database (http://www.neotomadb.org) in an R session.  Hosted and assisted by ROpenSci at https://github.com/ropensci/neotoma</p> <p>To use, simply extract to the R library folder and use as you would any other package.</p> <p> </p> <p>NOTE:  Some Mac users have reported installation problems.  The most up to date version can always be installed using:</p> <p>> install.packages("devtools")</p> <p>> require(devtools)</p> <p>> install_github("neotoma", "ropensci")</p> <p>> require(neotoma)</p> <p> </p> <p>More details in the help file and at the linked blog post (below).  This package is associated with the following publication:</p> <p>Goring, S., Dawson, A., Simpson, G. L., Ram, K., Graham, R. W., Grimm, E. C., & Williams, J. W.. (2015). neotoma: A Programmatic Interface to the Neotoma Paleoecological Database, 1(1), Art. 2. DOI: http://doi.org/10.5334/oq.ab</p

    Appropriate Similarity Measures for Author Cocitation Analysis

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    We provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis

    "Closing the R&D Gap, Evaluating the Sources of R&D Spending"

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    Both spending and tax policies have been implemented in the United States with the goal of stimulating private sector research and development (R&D). Karier questions whether current R&D policy, especially the research and experimentation tax credit, can contribute to closing the gap between nondefense expenditures on R&D in the United States and such expenditures in other countries, such as Japan and Germany. He also explores possible changes to our current R&D policy to make it more effective.

    Going Beyond Counting First Authors in Author Co-citation Analysis

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    The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed

    Letter from R. R. Zellick, Assistant Trust Officer, Anglo California National Bank of San Francisco, to Joseph R. Goodman, October 2, 1942

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    Letter from R. R. Zellick, Assistant Trust Officer at The Anglo California National Bank of San Francisco, to Joseph R. Goodman, regarding property owned by Dave Tatsuno. Zellick mentions a dispute between current tenants and Tatsuno, and that Tatsuno has asked Goodman to help locate trustworthy tenants.Personal correspondence, organizational records, government documents, publications, and other papers created or collected by Joseph R. Goodman documenting the forced removal and incarceration of Japanese Americans during World War II, as well as organized resistance to incarceration. Included in the collection are records of the Japanese Young Men's Christian Association and the Japanese American Citizens' League in San Francisco, including papers of the Japanese YMCA's executive secretary Lincoln Kanai; Sakai family papers; Goodman's correspondence to and from Japanese American incarcerees, organizations opposing forced removal and incarceration of Japanese Americans, the War Relocation Authority, and others; publications, photographs, and ephemera from the Topaz Relocation Center, where Goodman taught high school; War Relocation Authority records and publications; and newspaper clippings, pamphlets, and reports about forced removal and incarceration created by various government, religious, and civic organizations, in California and nationwide

    Tsunamis: The propagation of long waves onto a shelf

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    The various aspects of the propagation of long waves onto a shelf (i.e., reflection, .transmission and propagation on the shelf) are examined experimentally and theoretically. The results are applied to tsunamis propagating onto the continental shelf. A numerical method of solving the one-dimensional Boussinesq equations for constant depth using finite element techniques is presented. The method is extended to the case of an arbitrary variation in depth (i.e., gradually to abruptly varying depth) in the direction of wave propagation. The scheme is applied to the propagation of solitary waves over a slope onto a shelf and is confirmed by experiments. A theory is developed for the generation in the laboratory of long waves of permanent form, i.e., solitary and cnoidal waves. The theory, which incorporates the nonlinear aspects of the problem, applies to wave generators which consist of a vertical plate which moves horizontally. Experiments have been conducted and the results agree well with the generation theory, In addition, these results are used to compare the shape, celerity and damping characteristics of the generated waves with the long wave theories. The solution of the linear nondispersive theory for harmonic waves of a single frequency propagating over a slope onto a shelf is extended to the case of solitary waves. Comparisons of this analysis with the nonlinear dispersive theory and experiments are presented.Comparisons of experiments with solitary and cnoidal waves with the predictions of the various theories indicate that, apart from propagation, the reflection of waves from a change in depth is a linear process except in extreme cases. However, the transmission and the propagation of both the transmitted and the reflected waves in general are nonlinear processes. Exceptions are waves with heights which are very small compared to the depth. For these waves, the entire process of propagation onto a shelf in the vicinity of the shelf is linear. Tsunamis propagating from the deep ocean onto the continental shelf probably fall in this class

    Reproducibility and R

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    <p>A brief presentation for a weekly lab meeting about ways to improve the reproducibility of scientific workflows using R for the Williams Lab (Department of Geography, University of Wisconsin-Madison).  Also discussed at: https://downwithtime.wordpress.com/2013/11/19/reproducibility-and-r-better-results-better-code-better-science/</p
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