1,720,984 research outputs found
Semiclassical “Divide-and-Conquer” Method for Spectroscopic Calculations of High Dimensional Molecular Systems
We present a new semiclassical “divide-and-conquer” approach taylored for quantum dynamics simulations of high dimensional molecular systems. We show how the method is tested by calculating the quantum vibrational power spectra of water, methane and benzene, three molecules of increasing dimensionality for which benchmark quantum results are available. Then, we applied it to C60 fullerene, a system characterized by 174 vibrational degrees of freedom. Results show that the approach accurately account for quantum anharmonicities, purely quantum features like overtones, and the method does not suffer from the removal of degeneracy when the molecular symmetry is broken
Semiclassical vibrational spectroscopy : the importance of quantum anharmonicity in supra-molecular systems
Semiclassical (SC) vibrational spectroscopy has been applied successfully to several molecular systems thanks to the possibility to regain quantum effects accurately starting from short-time classical trajectories.[1-5] Larger molecular and supra-molecular systems represent instead an open challenge in the field of semiclassical spectroscopy mainly due to the necessity to work in very high dimensionality.
To start off the talk I will present some recent theoretical advances able to extend the range of applicability of SC vibrational spectroscopy to very high-dimensional systems.[6-7] Then, I will move to applications of semiclassical spectroscopy concerning the vibrational features of water clusters and two supra-molecular systems involving glycine.[8-9] These applications will point out the importance of a multi-reference, dynamical approach able to reproduce quantum anharmonicities without employing any ad-hoc scaling factor.
[1] M. F. Herman, E. Kluk, Chem. Phys. 1984, 91, 27.
[2] A. L. Kaledin, W. H. Miller, J. Chem. Phys. 2003, 118, 7174.
[3] M. Ceotto, S. Atahan, G. F. Tantardini, A. Aspuru-Guzik, J. Chem. Phys. 2009, 130, 234113.
[4] R. Conte, A. Aspuru-Guzik, M. Ceotto, J. Phys. Chem. Lett. 2013, 4, 3407.
[5] F. Gabas, R. Conte, M. Ceotto, J. Chem. Theory Comput. 2017, 13, 2378.
[6] M. Ceotto, G. Di Liberto, R. Conte, Phys. Rev. Lett. 2017, 119, 010401.
[7] G. Di Liberto, R. Conte, M. Ceotto, J. Chem. Phys. 2018, 148, 014307.
[8] G. Di Liberto, R. Conte, M. Ceotto, J. Chem. Phys. 2018, 148, 104302.
[9] F. Gabas, G. Di Liberto, R. Conte, M. Ceotto, to be submitted
Going Beyond Counting First Authors in Author Co-citation Analysis
The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
We provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
We conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
koamabayili/VECTRON-author-checklist: VECTRON author checklist
We have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
Semiclassical Molecular Dynamics for Spectroscopic Calculations of Complex Systems
I will present some novel semiclassical methods for spectroscopic calculations. These approaches can be employed for spectroscopic calculations of gas-phase molecular and supramolecular systems
up to hundreds of degrees of freedom, as well as to condensed phase systems. Some methods are based on a “divide-and-conquer” approach, where the full dimensional spectra are obtained as a
composition of several lower dimensional ones. Others exploit hierarchically the different levels of accuracy of different semiclassical propagators. For instance, in a system-bath problem lower
semiclassical accuracy is dedicated to the bath, while the system is treated with higher accuracy and the system spectrum is eventually singled out.
All methods are amenable for ab initio molecular dynamics simulations.
References
1. F. Gabas, G. Di Liberto, R. Conte, and M. Ceotto, Chemical Science 9 (41), 7885-8026 (2018);
2. X. Ma, G. Di Liberto, R. Conte, W. L. Hase, and M. Ceotto, JCP 149, 164113 (2018)
3. M. Micciarelli, R. Conte, J. Suarez, and M. Ceotto, JCP 149, 064115 (2018);
4. M. Buchholz, F. Grossmann, and M. Ceotto, JCP 148, 114107 (2018);
5. G. Di Liberto, R. Conte, and M. Ceotto, JCP 148, 104302 (2018);
6. G. Di Liberto, R. Conte, and M. Ceotto, JCP 148, 014307 (2018);
7. M. Buchholz, F. Grossmann, and M. Ceotto, JCP 147, 164110 (2017);
8. M. Ceotto, G. Di Liberto, and R. Conte, PRL 119, 010401 (2017);
9. F. Gabas, R. Conte, and M. Ceotto, JCTC 13, 2378-2388 (2017);
10. G. Di Liberto, M. Ceotto, JCP 145, 144107 (2016);
11. M. Buchholz, F. Grossmann, M. Ceotto, JCP 144, 094102 (2016)
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