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DIETARY PATTERNS AND ESOPHAGEAL CANCER: A POSTERIORI DIETARY PATTERNS IDENTIFIED THROUGH FACTOR ANALYSIS AND CLUSTER ANALYSIS
Full text linkBackground: Because of the complexity of diet and the potential interactions between dietary components, the use of dietary patterns has been proposed, to describe variations in overall dietary intakes in a specific population and to analyze the relationship between diet and cancer risk. In the present work, factor analysis and cluster analysis were used in combination to identify groups of subjects with similar dietary patterns.
Patients and methods: We analyzed data from an Italian case–control study, including 304 cases with squamous cell carcinoma of the esophagus and 743 hospital controls. Dietary habits were evaluated using a food frequency questionnaire. A posteriori dietary patterns were identified through principal component factor analysis performed on 28 selected nutrients. A varimax rotation was applied to achieve a simpler loading structure. Nutrients with absolute rotated factor loading greater or equal to 0.63 on a given pattern were used to name the patterns. For each pattern, participants were grouped into categories according to quartile of factor scores among the control population, and the odds ratios (OR) and corresponding 95% confidence intervals (CI) were estimated using unconditional multiple logistic regression models accounting for potential confounding variables.
Then, cluster analysis was performed on factor scores obtained from factor analysis. The main analysis was carried out using the k-means method with Euclidean distance. The initial seeds were obtained performing preliminarily a hierarchical method (Ward’s) and cutting the resulting dendrogram at the level corresponding to 6 clusters. Results from the main analysis were compared with those from other clustering solutions identified using the k-means method with Manhattan, Lagrange and Correlation coefficient similarity measure distances and the Partitioning around Medoids method, with both Euclidean and Manhattan distances. The identified clusters were characterized by examining the distribution of several sociodemographic and lifestyle variables, and the average consumption of selected nutrients and food groups, within cluster. The ORs were estimated for each of the identified clusters, and corresponding 95% CIs were obtained referring to the floating absolute risks method.
Results: PCFA allowed to identify five major dietary patterns, which explained about 80% of the total variance in the original nutrients. The Animal products and related components pattern (with high factor loadings on calcium, phosphorus, riboflavin, animal protein, saturated fatty acids, cholesterol, and zinc) was positively related to esophageal cancer risk (OR=1.64, 95% CI: 1.06-2.55). The Vitamins and fiber (with high loadings on vitamin C, total fiber, beta-carotene equivalents, soluble carbohydrates, and total folate) and the Other polyunsaturated fatty acids and vitamin D (with high loadings on other polyunsaturated fatty acids, vitamin D, and niacin) were inversely related to esophageal cancer (OR=0.50, 95% CI: 0.32-0.78, and OR=0.48, 95% CI: 0.31-0.74, respectively), while no relationship with this cancer was observed for the Starch-rich (starch, vegetable protein, and sodium) characterized by high loadings on (OR=0.80, 95% CI: 0.50-1.28) and the Other fats (with high loadings on linoleic acid, linolenic acid, and vitamin E) patterns (OR=1.04, 95% CI: 0.67-1.63). The naming of the factors, based on high factor scores characterizing each pattern, was confirmed by the distributions of selected nutrients and food groups.
The subsequent cluster analysis, based on differences in the dietary patterns, yielded 6 clusters, one of which (C3) was characterized by the lowest intakes of all nutrients and food groups considered, while the remaining clusters were determined by an extreme value of the dietary patterns, one-by-one. Subjects in the C1 cluster were characterized by the highest values of the Vitamins and fiber pattern, subjects in the C2 cluster had the highest values of the Other polyunsaturated fatty acids pattern, the C4 cluster was characterized by the highest scores of the Animal products and related components, subjects in the C5 cluster had the highest values of the Other fats pattern, the C6 cluster was characterized by the highest scores of the Starch-rich pattern and had the highest intakes of bread, and pasta and rice. Significant inverse relations were observed between the C1, C5 and C6 clusters (OR=0.59, 95% CI:0.40-0.88, OR=0.42, 95% CI:0.20-0.86, and OR=0.60, 95% CI: 0.42-0.86, respectively) – which were characterized by high values of the Vitamins and fiber, Other fats, and Starch-rich patterns, respectively – as compared to the C3 cluster. No significant risk was observed for the C2, and C4 clusters (OR=0.76, 95% CI: 0.51-1.13, and OR=1.29, 95% CI: 0.80-2.07).
Conclusion: The combined application of factor and cluster analyses, allows to identify key dietary aspects in a specific population, and to obtain mutually exclusive groups of subjects who are similar for these characteristics. The two techniques have limitations that arise from the subjective decisions involved in the analyses. In this application, various alternative options were tried, to check robustness and solution stability. Among these complementary analyses, results from PCFA were compared with those from another principal axis factoring, and those from PCFA analyses performed separately in strata of center and gender, and in randomly generated split samples. Moreover, the internal consistency of the identified patterns was evaluated using the Cronbach’s coefficient alphas. All these checks supported the decisions adopted in the main analyses. As concern cluster analysis, to limit the influence of the starting point, the initial seeds used in the k-means method were obtained performing a hierarchical clustering (Ward’s method) and cutting the corresponding dendrogram at the level k=6. Moreover, some alternative solutions were identified through different methods and distances, yielding comparable clustering solutions. Another limitation of cluster analysis is its sensitivity to the presence of outliers; however, the exclusion of 8 potential outliers did not materially change the results
Nutrient dietary patterns and the risk of colorectal cancer : a case-control study from Italy
Full text linkThe role of diet on colorectal cancer has been largely investigated in terms of foods and nutrients, but rarely in terms of dietary patterns. We evaluated the relationship between major dietary patterns and colorectal cancer in an Italian case-control study including 1,225 patients with cancer of the colon, 728 patients with cancer of the rectum, and 4,154 controls, hospitalized for acute non-neoplastic diseases. Dietary habits were investigated through a validated food-frequency questionnaire. We identified dietary patterns on a selected set of nutrients through principal component factor analysis. Odds ratios (OR) and 95% confidence intervals (CI) for both cancer were estimated using unconditional multiple logistic regression models on quintiles of factor scores. We identified 4 major dietary patterns named Animal products, Vitamins and fiber, Unsaturated fats, Strach-rich. No significant association was observed between Animal products pattern and cancer of the colon (OR=0.97, 95% CI: 0.78-1.20, for the highest quintile of factor scores as compared to the lowest), and rectum (OR=1.26, 95% CI: 0.97-1.64). An inverse relationship was found for the Vitamins and fiber pattern and cancer of the rectum (OR=0.68, 95% CI: 0.52-0.88), but not for that of the colon (OR=0.90, 95% CI: 0.73-1.12). A direct association was observed between the Starch-rich pattern and both cancer of the colon (OR=2.10, 95% CI: 1.64-2.68) and rectum (OR=1.93, 95% CI: 1.42-2.63). An inverse association was found for the Unsaturated fats pattern and cancer of the colon (OR=0.89, 95% CI: 0.72-1.10), while no significant association was found for the Unsaturated fats pattern and rectal cancer (OR=1.33, 95% CI: 1.02-1.74)
Breakfast and behavior in morning tasks : facts or fads?
No full textBackground: Most of the studies investigating the effects of breakfast on cognitive performance have compared performance in subjects who have or have not consumed this meal. However, characteristics of breakfast itself may influence mental abilities. Moreover, as far as the positive effects of having breakfast is more evident, research may focus on the specific characteristics of an adequate breakfast. Methods: To update an existing systematic review, published at the beginning of 2014, on the role of nutrient composition and/or energy intake at breakfast on the accomplishment of school-related tasks and cognition, we carried out a systematic review of the literature through PUBMED database. Results: From the literature search, we identified 39 papers, of which 2 were eligible according to our inclusion criteria. Both the selected papers concerned randomized crossover studies on the acute effect of breakfast carried out in a school setting in the United Kingdom. Both studies compared 2 iso-energetic breakfasts with a similar macronutrient composition; however, the alternative breakfasts were meant to differ in terms of glycemic index or glycemic load. The effects of breakfast composition were investigated on memory, attention, and information processing in both studies. However, different tests and subdomains were considered. Limitations: Studies on these issues are still inconsistent and quantitatively insufficient to draw firm conclusions. Conclusions: While the hypothesis of a better mental performance with breakfast>20% daily energy intake still needs confirmation, there does appear to be extra evidence that a lower postprandial glycemic response is beneficial to mental performance
The application of factor analysis in the identification of dietary patterns : some notes from an analysis of gastric cancer
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Analyzing electronic momentary assessment data on chronic pain and weather conditions : a first look
Full text linkAlthough scientific evidence is scarce, patients affected by chronic masticatory muscle pain often report increased pain in response to changes in weather conditions. The aim of the present study was to assess a potential relationship between pain intensity and meteorological factors, through a newly developed, portable device, in this population. Seven female subjects diagnosed with myofascial pain of the masticatory muscles participated in the study. Each patient was provided with a portable data logger that recorded and stored weather variables every 15 minutes. Patients were asked to record the level of perceived pain on an electronic visual analogue scale (VAS) every hour. The relationship between meteorological variables and pain scores was investigated using separate generalized least squares regression models with a correlation structure estimated via autoregressive integrated moving average models
Going Beyond Counting First Authors in Author Co-citation Analysis
Full text linkThe present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
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