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A cross species metabolomics analysis on the effect of biological stressors such as depression and sleep loss on the host metabolome
It would be next to impossible to list the many people who have supported and helped me get to where I am today. My trajectory from birth to graduate school has not been linear. I have always had a natural curiosity about the world around me; starting from my time growing up as an illegal immigrant in the city of Los Angeles, to my time served as rifleman in the United State Marine Corps, and my current position as a scientist. The richness of these experiences has had a profound influence on the way I approach life. Through it all, Patricia, my mother, sacrificed everything and made this possible. Cristina, my younger sister, has been a constant reminder that I have an obligation as an older brother to make her proud. Arpa, my love and joy, has walked this crucible called graduate school next to me, and has been a constant source of love and encouragement. To the three most important people in my life, thank you for everything. My success as a scientist can be attributed to the various scientist I can call mentors and friends. Professor Jamil Momand, my undergraduate advisor and research mentor, introduced me to the field of biochemistry and encourage me to pursue my Ph.D.. Thank you for your guidance and support. Professor Pieter C. Dorrestein, my Ph.D mentor, provided me with a once in a life time experience graduate education in mass spectrometry and its application in life sciences. I cannot express how thankful I am for your mentorship, guidance, and support. The environment that you have cultivated in the Dorrestein lab provided me with the tools and opportunities to grow and succeed as a researcher. I will always appreciate everything that you have done for me. I would also like to thank my committee members for their role in my graduate education, thank you Professor Rob Knight, Professor Rachel Dutton, Professor Susan S. Golden, and Professor Jose Pruneda-Paz.Chapter 2, in full, is a reprint of the material as it appears in Journal of The American Society for Mass Spectrometry 2019. da Silva, R. R; Vargas, F; Ernst, M; Nguyen, N. H; Bolleddu, S; del Rosario, K. K; Tsunoda, S. M; Dorrestein, P. C; Jarmusch, A. K.; Springer US, 2018. The dissertation author was a primary investigator and author of this paper. Chapter 3, in full, has been submitted for publication of the material as it may appear in Rapid Communications in Mass Spectrometry, 2019, Vargas, F; Weldon, K. C; Sikora, N; Wang, M; Zhang, Z; Gentry, E. C; Panitchpakdi, M. W; Caraballo, M; Dorrestein, P. C; Jarmusch, A. K.; John Wiley & Sons, 2019. The dissertation author was the primary investigator and author of this paper. Chapter 4, in full, has been submitted for publication of the material as it may appear in Frontiers in Psychiatry, 2019, Vargas, F; Dethloff, F; Emmanuel, E; Quinn, R; Park, D. I; Herzog, D. P, Müller, M. B; Gentry, E. C; Knight, R; Gonzalez, A; Dorrestein, P. C; Turck, C. W.; Frontiers Media, 2019. The dissertation author was the primary investigator and author of this paper. Chapter 5, in full, has been submitted for publication of the material as it may appear in Scientific Reports, 2019, Thompson, R. S; Vargas, F; Dorrestein, P. C; Chichlowski, M; Berg, B. M; Fleshner, M.; Nature Publishing Group, 2019. The dissertation author was a primary investigator and author of this paper. Chapter 6, in full, has been submitted for publication of the material as it may appear in Sleep, 2019, Bowers, S. J; Vargas, F; Gonzalez, A; He, S; Jiang, P; Dorrestein, P. C; Knight, R; Wright, K. P; Lowry, C. A; Fleshner, M; Vitaerna, M. H; Turek, F. W.; Oxford University Press, 2019. The dissertation author was a primary investigator and author of this paper
Going Beyond Counting First Authors in Author Co-citation Analysis
The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation
counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings
are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that
only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into
account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed
Variations on the Author
“Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship
Appropriate Similarity Measures for Author Cocitation Analysis
We provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis
Dispelling the Myths Behind First-author Citation Counts
We conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued
use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation
counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more
sophisticated methods
koamabayili/VECTRON-author-checklist: VECTRON author checklist
We have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
Author-wise bibliometric analysis based on entropy.
Author-wise bibliometric analysis based on entropy.</p
Author Under Sail The Imagination of Jack London, 1893-1902
In Author Under Sail, Jay Williams offers the first complete literary biography of Jack London as a professional writer engaged in the labor of writing. It examines the authorial imagination in London's work, the use of imagination in both his fiction and nonfiction, and the ways he defined imagination in the creative process in his business dealings with his publishers, editors, and agents. In this first volume of a two-volume biography, Williams traverses the years 1893 to 1902, from London's "Story of a Typhoon" to The People of the Abyss. The Jack London who emerges in the pages of Author Under Sail is a writer whose partnership with publishers, most notably his productive alliance with George Brett of Macmillan, was one of the most formative in American literary history. London pioneered many author models during the heyday of realism and naturalism, blurring the boundaries of these popular genres by focusing on absorption and theatricality and the representation of the seen and unseen. London created an impassioned, sincere, and extremely personal realism unlike that of other American writers of the time. Author Under Sail is a literary tour de force that reveals the full range of London as writer, creative citizen, and entrepreneur at the same time it sheds light on the maverick side of machine-age literature.Intro -- Title Page -- Copyright Page -- Dedication -- Contents -- Acknowledgments -- Introduction -- 1. Spirit Truth -- 2. From Absorption to Theatricality and Back Again -- 3. "I Will Build a New Present" -- 4. Sons as Authors -- 5. Fathers as Publishers -- 6. The Daughter as Author -- 7. Lovers as Authors -- 8. At Sea with the Family -- 9. Yellow News, Yellow Stories -- 10. The Return Home -- Notes -- Bibliography -- Index -- About Jay WilliamsIn Author Under Sail, Jay Williams offers the first complete literary biography of Jack London as a professional writer engaged in the labor of writing. It examines the authorial imagination in London's work, the use of imagination in both his fiction and nonfiction, and the ways he defined imagination in the creative process in his business dealings with his publishers, editors, and agents. In this first volume of a two-volume biography, Williams traverses the years 1893 to 1902, from London's "Story of a Typhoon" to The People of the Abyss. The Jack London who emerges in the pages of Author Under Sail is a writer whose partnership with publishers, most notably his productive alliance with George Brett of Macmillan, was one of the most formative in American literary history. London pioneered many author models during the heyday of realism and naturalism, blurring the boundaries of these popular genres by focusing on absorption and theatricality and the representation of the seen and unseen. London created an impassioned, sincere, and extremely personal realism unlike that of other American writers of the time. Author Under Sail is a literary tour de force that reveals the full range of London as writer, creative citizen, and entrepreneur at the same time it sheds light on the maverick side of machine-age literature.Description based on publisher supplied metadata and other sources.Electronic reproduction. Ann Arbor, Michigan : ProQuest Ebook Central, YYYY. Available via World Wide Web. Access may be limited to ProQuest Ebook Central affiliated libraries
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