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    Involvement of epigenetic factors and metabolism in pluripotency maintenance in C. elegans

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    During the development of multi-cellular organisms, cells undergo differentiation into distinct cell types. Acquisition of different fates is a consequence of intermingled multiple external stimuli (non cell autonomous) and internal events (cell autonomous). The external stimuli include metabolism (in the sense of feeding) and contacts with neighbouring cells which impact the cell context and modify its life history. This leads to changes in chromatin organization and the accessibility of target genes to transcription factors. Cell fate acquisition or differentiation is often a one-way path: differentiated cells do not change fate. Recently however, the setup of the induction of pluripotent stem cells (iPSCs) showed that differentiated cells can be reprogrammed, based on the expression of specific transcription factors. IPSCs formation correlates with heterochromatin loss. In C. elegans, the absence of MES-2, the enzymatic core of the Polycomb complex responsible for histone 3 lysine 27 (H3K27) methylation in heterochromatin, leads to increased cell fate plasticity during embryonic development, measured as the capacity to convert embryos into specific tissues by the ectopic expression of cell-fate specifying transcription factors (cell fate challenge). Here we describe a controlled cell fate challenge system using single copy transgenes, tractable in both embryonic and larval stages. In embryos, similar results were obtained as for previous multicopy arrays, with an extension of the plasticity window in the absence of H3K27 methylation. When muscle differentiation was induced in the first larval stage, worms lacking H3K27me arrested their development, while an increased number of cells expressing the muscle marker. Numerous non terminally differentiated lineages were perturbed, including the V, M and P ones, mostly with unscheduled cell division. Furthermore, ectopic muscle induction led to the division of bona fide muscle cells. These organismal and cellular phenotypes could be rescued by knock-down of multiple components of the Notch pathway, a cell-cell signalling pathway implicated in asymmetric fate decisions. Interestingly, another regulator of plasticity appears to be food availability, as starved animals are resistant to cell fate challenge. I showed that the presence of food leads to visible reorganization of chromatin, potentially rendering target sites accessible to the specifying transcription factors. The presence/absence of food appear to be sensed and transduced by the insulin/insulinlike pathway, as a daf-2 reduction of function mutation ablates the starvation-induced cell fate challenge resistance. Although I cannot exclude the involvement of other pathways, this work provides evidence for the function of external stimuli on cell plasticity determination

    Going Beyond Counting First Authors in Author Co-citation Analysis

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    The present study examines one of the fundamental aspects of author co-citation analysis (ACA) - the way co-citation counts are defined. Co-citation counting provides the data on which all subsequent statistical analyses and mappings are based, and we compare ACA results based on two different types of co-citation counting - the traditional type that only counts the first one among a cited work's authors on the one hand and a non-traditional type that takes into account the first 5 authors of a cited work on the other hand. Results indicate that the picture produced through this non-traditional author co-citation counting contains more coherent author groups and is therefore considerably clearer. However, this picture represents fewer specialties in the research field being studied than that produced through the traditional first-author co-citation counting when the same number of top-ranked authors is selected and analyzed. Reasons for these effects are discussed

    Variations on the Author

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    “Variations on the Author” discusses two of Eduardo Coutinho’s recent films (Um Dia na Vida, from 2010, and Últimas Conversas, posthumously released in 2015) and their contribution to the general question of documentary authorship. The director’s filmography is characterized by a consistent yet self-effacing form of authorial self-inscription: Coutinho often features as an interviewer that rather than express opinions propels discourses; an interviewer that is good at listening. This mode of self-inscription characterizes him as an author who is not expressive but who is nonetheless markedly present on the screen. In Um Dia na Vida, however, Coutinho is completely absent form the image, while Últimas Conversas, on the contrary, includes a confessional prologue that moves the director from the margins to the center of his films. This article examines the ways in which these works stand out in the filmography of a director who offers new insights into the notion of cinematic authorship

    Appropriate Similarity Measures for Author Cocitation Analysis

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    We provide a number of new insights into the methodological discussion about author cocitation analysis. We first argue that the use of the Pearson correlation for measuring the similarity between authors’ cocitation profiles is not very satisfactory. We then discuss what kind of similarity measures may be used as an alternative to the Pearson correlation. We consider three similarity measures in particular. One is the well-known cosine. The other two similarity measures have not been used before in the bibliometric literature. Finally, we show by means of an example that our findings have a high practical relevance.information science;Pearson correlation;cosine;similarity measure;author cocitation analysis

    Dispelling the Myths Behind First-author Citation Counts

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    We conducted a full-scale evaluative citation analysis study of scholars in the XML research field to explore just how different from each other author rankings resulting from different citation counting methods actually are, and to demonstrate the capability of emerging data and tools on the Web in supporting more realistic citation counting methods. Our results contest some common arguments for the continued use of first-author citation counts in the evaluation of scholars, such as high correlations between author rankings by first-author citation counts and other citation counting methods, and high costs of using more realistic citation counting methods that are not well-supported by the ISI databases. It is argued that increasingly available digital full text research papers make it possible for citation analysis studies to go beyond what the ISI databases have directly supported and to employ more sophisticated methods

    Author Index

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    koamabayili/VECTRON-author-checklist: VECTRON author checklist

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    We have done our best to complete the author checklist relating to the use of animals in the hut study. Note that the objective for the hut study was to evaluate the IRS treatment applications for residual efficacy against Anopheles mosquitoes, including the local An. coluzzii mosquito population. Cows were only used to attract mosquitoes into the huts and no tests were carried out directly on the cows. The author checklist is intended for use with studies where experiments are carried out on animals, which is why we have had such difficulty in completing this for the hut study, as many of the questions do not relate to how the cows were used
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