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Non-invasive VOCs detection to monitor the gut microbiota metabolism in-vitro
Get PDFThis work implemented a non-invasive volatile organic compounds (VOCs) monitoring approach to study how food components are metabolised by the gut microbiota in-vitro. The fermentability of a model food matrix rich in dietary fibre (oat bran), and a pure prebiotic (inulin), added to a minimal gut medium was compared by looking at global changes in the volatilome. The substrates were incubated with a stabilised human faecal inoculum over a 24-h period, and VOCs were monitored without interfering with biological processes. The fermentation was performed in nitrogen-filled vials, with controlled temperature, and tracked by automated headspace-solid-phase microextraction coupled with gas chromatography-mass spectrometry. To understand the molecular patterns over time, we applied a multivariate longitudinal statistical framework: repeated measurements-ANOVA simultaneous component analysis. The methodology was able to discriminate the studied groups by looking at VOCs temporal profiles. The volatilome showed a time-dependency that was more distinct after 12 h. Short to medium-chain fatty acids showed increased peak intensities, mainly for oat bran and for inulin, but with different kinetics. At the same time, alcohols, aldehydes, and esters showed distinct trends with discriminatory power. The proposed approach can be applied to study the intertwined pathways of gut microbiota food components interaction in-vitr
1H-NMR approach for the discrimination of PDO Grana Padano cheese from non-PDO cheeses
Get PDFProtected Designation of Origin cheeses are products with high-quality standards that can claim higher prices on the market. For this reason, non-PDO cheeses with lower quality can be mislabeled as PDO or mixed with it for economic gain especially when the product is in a shredded form. Luckily, the production of PDO cheese is subjected to strict procedural specification rules that result in a product with a defined profile of its metabolites, which can be used for authentication purposes. In this study, an NMR metabolomic approach combined with multivariate analysis was implemented to build a classification model able to discriminate PDO Grana Padano cheese from a large dataset of competitors. The great advantage of the proposed approach is a simple sample preparation, obtaining a holistic overview of the analyzed samples. The untargeted approach highlighted a “typical profile” of Grana Padano samples, which could be used for protection purposes. In parallel, the targeted results allowed us to identify potential chemicals, such as lactate, some amino acids and lipids. These initial results could open the road to a potential new additional tool to check the authenticity of PDO cheeses in the futur
Tracking the transfer of antimicrobial resistance genes from raw materials to sourdough breads
Get PDFThe present study hypothesizes that raw materials used in bread making can transfer antibiotic resistance genes (ARGs) to processed breads. Four types of flour and four types of semolina were purchased from supermarkets and inoculated with a commercial dried sourdough starter to make breads. The microbiological characteristics of all raw materials and fermented doughs were investigated. The levels of yeasts and lactic acid bacteria (LAB) increased up to 107 CFU/g. The values of pH decreased to 4.54–4.86 while total titratable acidity increased inversely. All unprocessed and processed samples, including breads, were analyzed by a molecular approach to detect bacterial and fungal DNAs and 17 antibiotic resistance genes for penicillins, macrolides, tetracyclines, and chloramphenicol. Illumina technology showed that the operational taxonomy units (OTUs) identified from unprocessed wheat milling products, fermented doughs, and baked products mainly belonged to Acetobacteraceae. Enterococci were present in all doughs. After baking, the relative abundance (RA)% of Enterococcus and Acetobacteraceae decreased. The DNA analyzed for fungal composition showed that Kazachstania humilis dominated dried sourdough starter and doughs, and its OTUs were also detected at high RA% in baked products. The search for ARGs revealed that all samples analyzed did not show resistance to penicillins, chloramphenicol, and macrolides. However, three of the semolinas included in this study (S1, S3 and S4) and the corresponding doughs (SD1, SD3 and SD4) were positive for tet(A) and tet(B) resistance genes. This work indicated that breads have a limited role in the dissemination of ARG
Detection and characterization of incidental vibrations from Drosophila suzukii in infested fruits
Get PDFThe spotted-wing drosophila (SWD), Drosophila suzukii (Matsumura), is an invasive species native to East Asia and now widespread worldwide. Major economic damage is caused by the larvae developing within ripening soft-skin fruit. Currently, larval detection in fruit is limited to destructive methods and post-harvest control strategies heavily rely on the use of chemicals or cold to inhibit egg eclosion and larval growth. Feeding larvae are likely to induce substrate-borne vibrations in the berry that could be exploited as cues by predators or to develop a non-invasive pest detection method, an approach previously applied on leaves and wooden structures, but never on fresh fruit. We used a laser vibrometer to detect and characterize the incidental vibrations produced by D. suzukii larvae within fresh blueberries at five different pest age (48, 96, 168, 216 and 264 h). An innovative statistical analysis was performed to assess if infestation level (number of pupae) and pest age (hours after exposure) affect the spectrum and the amplitude of vibrations. The recordings of infested berries were characterized by the presence of a series of broad-band pulses (frequency range 0.1–2 kHz) without a regular temporal pattern, in an amplitude range between 12.1 and 946 μm/s. Furthermore, the analysis revealed the possibility to distinguish between different pest ages and infestation levels. By a spectral analysis of the recordings, the pest ages can be distinguished among each other, but for the age groups at 168 and 216 h after infestation. The vibration amplitude trend gradually increased up to 168–216 h after infestation, and then decreased until fly emergence. Low-infested blueberries showed a faster D. suzukii development time compared to high-infested blueberries. This was reflected into vibrational recordings, as low-infested blueberries exhibited peak amplitude at earlier stage compared to high-infested ones. Results suggest that D. suzukii larvae induce detectable vibrations by feeding within berries that are dependent on infestation level and pest age. We discuss the possible ecological role of such vibrations as cues for unintended receivers, such as predators and parasitoids, and their potential for innovative infestation detection method
A multidisciplinary approach in tackling invasive species: barcoding, morphology, and metataxonomy of the leafhopper Arboridia adanae
Get PDFThe leafhopper genus Arboridia includes several species that feed on Vitis vinifera and cause leaf chlorosis. We report the first alien Arboridia infestation in Italy in 2021 in an Apulian vineyard. To confirm the taxonomic status of the species responsible for crop damage, and reconstruct its demographic history, we barcoded individuals from Apulia together with Arboridia spp. from Crete (Greece), A. adanae from Central Turkey and other specimens of the presumed sister species, A. dalmatina from Dalmatia (Croatia). Molecular phylogenies and barcoding gap analysis identified clades not associated with sampling locations. This result is incongruent with classical specimen assignment and is further supported by morphological analyses, which did not reveal significant differences among the populations. Therefore, we propose A. dalmatina as a junior synonym of A. adanae, which would become the only grapevine-related Arboridia species in the eastern Mediterranean. To further characterise A. adanae evolution, we performed a molecular clock analysis that suggested a radiation during the Pleistocene glaciations. Finally, to assess whether the Apulian individuals carried microorganisms of agricultural relevance, we sequenced their bacterial microbiota using 16S rRNA amplicon sequencing identifying three phytopathogens not generally associated with Arboridia activities as well as Wolbachia in one Apulian haplogroup. We discuss the agricultural implications of this infestatio
Caratteristiche vegeto produttive di sei cloni di Pinot bianco coltivati in un vigneto in Trentino (2018-2023)
No full textRecords on the possible effect of climate changes on the distribution of some orthopteroid insects
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