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Solution to collision induced dissociation mass spectrometry challenge
No full textPeer reviewed: YesNRC publication: Ye
CIPK9 is involved in seed oil regulation in Brassica napus L. and Arabidopsis thaliana (L.) Heynh.
No full textBackground: Accumulation of storage compounds during seed development plays an important role in the life cycle of oilseed plants; these compounds provide carbon and energy resources to support the establishment of seedlings. Results: In this study, we show that BnCIPK9 has a broad expression pattern in Brassica napus L. tissues and that wounding stress strongly induces its expression. The overexpression of BnCIPK9 during seed development reduced oil synthesis in transgenic B. napus compared to that observed in wild-type (WT) plants. Functional analysis revealed that seed oil content (OC) of complementation lines was similar to that of WT plants, whereas OC in Arabidopsis thaliana (L.) Heynh. Atcipk9 knockout mutants (cipk9) was higher than that of WT plants. Seedling of cipk9 mutants failed to establish roots on a sugar-free medium, but root establishment could be rescued by supplementation of sucrose or glucose. The phenotype of complementation transgenic lines was similar to that of WT plants when grown on sugar-free medium. Mutants, cipk9, cbl2, and cbl3 presented similar phenotypes, suggesting that CIPK9, CBL2, and CBL3 might work together and play similar roles in root establishment under sugar-free condition. Conclusion: This study showed that BnCIPK9 and AtCIPK9 encode a protein kinase that is involved in sugar-related response and plays important roles in the regulation of energy reserves. Our results suggest that AtCIPK9 negatively regulates lipid accumulation and has a significant effect on early seedling establishment in A. thaliana. The functional characterization of CIPK9 provides insights into the regulation of OC, and might be used for improving OC in B. napus. We believe that our study makes a significant contribution to the literature because it provides information on how CIPKs coordinate stress regulation and energy signaling.Peer reviewed: YesNRC publication: Ye
Core\u2013shell titanium dioxide\u2013titanium nitride nanotube arrays with near-infrared plasmon resonances
No full textTitanium nitride (TiN) is a ceramic with high electrical conductivity which in nanoparticle form, exhibits localized surface plasmon resonances (LSPRs) in the visible region of the solar spectrum. The ceramic nature of TiN coupled with its dielectric loss factor being comparable to that of gold, render it attractive for CMOS polarizers, refractory plasmonics, surface-enhanced Raman scattering and a whole host of sensing applications. We report core\u2013shell TiO2\u2013TiN nanotube arrays exhibiting LSPR peaks in the range 775\u2013830 nm achieved by a simple, solution-based, low cost, large area-compatible fabrication route that does not involve laser-writing or lithography. Self-organized, highly ordered TiO2 nanotube arrays were grown by electrochemical anodization of Ti thin films on fluorine-doped tin oxide-coated glass substrates and then conformally coated with a thin layer of TiN using atomic layer deposition. The effects of varying the TiN layer thickness and thermal annealing on the LSPR profiles were also investigated. Modeling the TiO2\u2013TiN core\u2013shell nanotube structure using two different approaches, one employing effective medium approximations coupled with Fresnel coefficients, resulted in calculated optical spectra that closely matched the experimentally measured spectra. Modeling provided the insight that the observed near-infrared resonance was not collective in nature, and was mainly attributable to the longitudinal resonance of annular nanotube-like TiN particles redshifted due to the presence of the higher permittivity TiO2 matrix. The resulting TiO2\u2013TiN core\u2013shell nanotube structures also function as visible light responsive photocatalysts, as evidenced by their photoelectrochemical water-splitting performance under light emitting diode illumination using 400, 430 and 500 nm photons.Peer reviewed: YesNRC publication: Ye
Development of a multi-axis active seat mount to mitigate vibration transmission to helicopter aircrew
No full textThis paper presents the performance evaluation of a multi-axis active helicopter seat mount. By simultaneously counteracting vibrations in three orthogonal directions, the mount mitigates the transmission of helicopter vibrations from the floor to the seat before reaching to the human body. This design is tested independently in each direction and simultaneously in all three directions using shaker tables. The input vibration prole used in these tests are helicopter flight measurements collected on a Bell-412 research helicopter. To cancel the input vibration, the feedforward Filtered-x Least Mean Square (FxLMS) algorithm is employed as the adaptive control law. Signicant suppression of the harmonic components of the N/rev harmonics is achieved for both independent and simultaneous testing. In each case, the overall g-rms reduction level is more than 40 % along each axis. The experimental testing veried the effectiveness of the active seat mount as a means to attenuate multi-axis vibrations experienced by helicopter aircrew.Peer reviewed: YesNRC publication: Ye
Fast detection of vascular plaque in optical coherence tomography images using a reduced feature set
No full textOptical coherence tomography (OCT) images are capable of detecting vascular plaque by using the full set of 26 Haralick textural features and a standard K-means clustering algorithm. However, the use of the full set of 26 textural features is computationally expensive and may not be feasible for real time implementation. In this work, we identified a reduced set of 3 textural feature which characterizes vascular plaque and used a generalized Fuzzy C-means clustering algorithm. Our work involves three steps: 1) the reduction of a full set 26 textural feature to a reduced set of 3 textural features by using genetic algorithm (GA) optimization method 2) the implementation of an unsupervised generalized clustering algorithm (Fuzzy C-means) on the reduced feature space, and 3) the validation of our results using histology and actual photographic images of vascular plaque. Our results show an excellent match with histology and actual photographic images of vascular tissue. Therefore, our results could provide an efficient pre-clinical tool for the detection of vascular plaque in real time OCT imaging.Peer reviewed: YesNRC publication: Ye
Identification, growth and toxicity assessment of Coolia Meunier (Dinophyceae) from Nova Scotia, Canada
No full textBenthic dinoflagellates of the toxigenic genus Coolia Meunier (Dinophyceae) are known to have a global distribution in both tropical and temperate waters. The type species, C. monotis, has been reported from the Mediterranean Sea, the NE Atlantic and from Rhode Island, USA in the NW Atlantic, whereas other species in the genus have been reported from tropical locations. Coolia cells were observed in algal drift samples collected at seven sites in Nova Scotia, Canada. Clonal isolates were established from four of these locations and identified with light and scanning electron microscopy, then confirmed with genetic sequencing to be C. monotis. This is the first record of this species in Nova Scotia. The isolates were established and incubated at 18\u202f\ub0C under a 14:10\u202fL:D photoperiod with an approximate photon flux density of 50\u201360\u202f\u3bcmol\u202fm 122\u202fs 121. Growth experiments using an isolate from Johnston Harbour (CMJH) were carried out at temperatures ranging from 5 to 30\u202f\ub0C under the same photoperiod with an approximate photon flux density of 45\u201350\u202f\u3bcmol\u202fm 122\u202fs 121. Cells tolerated temperatures from 5 to 25\u202f\ub0C with optimum growth and mucilage aggregate production between 15 and 20\u202f\ub0C. Methanol extracts of this isolate examined by Liquid Chromatography-Mass Spectrometry (LC\u2013MS) did not show the presence of the previously reported cooliatoxin. Toxic effects were assayed using two zebrafish bioassays, the Fish Embryo Toxicity (FET) assay and the General Behaviour and Toxicity (GBT) assay. The results of this study demonstrate a lack of toxicity in C. monotis from Nova Scotia, as has been reported for other genetically-confirmed isolates of this species. Conditions in which cell growth that could potentially degrade water quality and provide substrate and dispersal mechanisms for other harmful microorganisms via mucilage production are indicated.Peer reviewed: YesNRC publication: Ye
Influence of powder morphology and microstructure on the cold spray and mechanical properties of Ti6Al4V coatings
No full textThe powder microstructure and morphology has significant influence on the cold sprayability of Ti6Al4V coatings. Here, we compare the cold sprayability and properties of coatings obtained from Ti6Al4V powders of spherical morphology (SM) manufactured using plasma gas atomization and irregular morphology (IM) manufactured using the Armstrong process. Coatings deposited using IM powders had negligible porosity and better properties compared to coatings deposited using SM powders due to higher particle impact velocities, porous surface morphology and more deformable microstructure. To evaluate the cohesive strength, multi-scale indentation was performed and hardness loss parameter was calculated. Coatings deposited using SM powders exhibited poor cohesive strength compared to coatings deposited using IM powders. Images of the residual indents showed de-bonding and sliding of adjacent splats in the coatings deposited using SM powders irrespective of the load. Coatings deposited using IM powders showed no evidence of de-bonding at low loads. At high loads, splat de-bonding was observed resulting in hardness loss despite negligible porosity. Thus, while the powders from Armstrong process lead to a significant improvement in sprayability and coating properties, further optimization of powder and cold spray process will be required as well as consideration of post-annealing treatments to obtain acceptable cohesive strength.Peer reviewed: YesNRC publication: Ye
Inter-laboratory study for the certification of trace elements in seawater certified reference materials NASS-7 and CASS-6
No full textCertification of trace metals in seawater certified reference materials (CRMs) NASS-7 and CASS-6 is described. At the National Research Council Canada (NRC), column separation was performed to remove the seawater matrix prior to the determination of Cd, Cr, Cu, Fe, Pb, Mn, Mo, Ni, U, V, and Zn, whereas As was directly measured in 10-fold diluted seawater samples, and B was directly measured in 200-fold diluted seawater samples. High-resolution inductively coupled plasma mass spectrometry (HR-ICPMS) was used for elemental analyses, with double isotope dilution for the accurate determination of B, Cd, Cr, Cu, Fe, Pb, Mo, Ni, U, and Zn in seawater NASS-7 and CASS-6, and standard addition calibration for As, Co, Mn, and V. In addition, all analytes were measured using standard addition calibration with triple quadrupole (QQQ)-ICPMS to provide a second set of data at NRC. Expert laboratories worldwide were invited to contribute data to the certification of trace metals in NASS-7 and CASS-6. Various analytical methods were employed by participants including column separation, co-precipitation, and simple dilution coupled to ICPMS detection or flow injection analysis coupled to chemiluminescence detection, with use of double isotope dilution calibration, matrix matching external calibration, and standard addition calibration. Results presented in this study show that majority of laboratories have demonstrated their measurement capabilities for the accurate determination of trace metals in seawater. As a result of this comparison, certified/reference values and associated uncertainties were assigned for 14 elements in seawater CRMs NASS-7 and CASS-6, suitable for the validation of methods used for seawater analysis.Peer reviewed: YesNRC publication: Ye
Kalman filter approach for uncertainty quantification in time-resolved laser-induced incandescence
No full textTime-resolved laser-induced incandescence (TiRe-LII) data can be used to infer spatially and temporally resolved volume fractions and primary particle size distributions of soot-laden aerosols, but these estimates are corrupted by measurement noise as well as uncertainties in the spectroscopic and heat transfer submodels used to interpret the data. Estimates of the temperature, concentration, and size distribution of soot primary particles within a sample aerosol are typically made by nonlinear regression of modeled spectral incandescence decay, or effective temperature decay, to experimental data. In this work, we employ nonstationary Bayesian estimation techniques to infer aerosol properties from simulated and experimental LII signals, specifically the extended Kalman filter and Schmidt\u2013Kalman filter. These techniques exploit the time-varying nature of both the measurements and the models, and they reveal how uncertainty in the estimates computed from TiRe-LII data evolves over time. Both techniques perform better when compared with standard deterministic estimates; however, we demonstrate that the Schmidt\u2013Kalman filter produces more realistic uncertainty estimates.Peer reviewed: YesNRC publication: Ye
Landau-Zener-St\ufcckelberg-Majorana interferometry of a single hole
No full textWe perform Landau-Zener-St\ufcckelberg-Majorana (LZSM) spectroscopy on a system with strong spin-orbit interaction (SOI), realized as a single hole confined in a gated double quantum dot. Analogous to electron systems, at a magnetic field B=0 and high modulation frequencies, we observe photon-assisted tunneling between dots, which smoothly evolves into the typical LZSM funnel-shaped interference pattern as the frequency is decreased. In contrast to electrons, the SOI enables an additional, efficient spin-flip interdot tunneling channel, introducing a distinct interference pattern at finite B. Magnetotransport spectra at low-frequency LZSM driving show the two channels to be equally coherent. High-frequency LZSM driving reveals complex photon-assisted tunneling pathways, both spin conserving and spin flip, which form closed loops at critical magnetic fields. In one such loop, an arbitrary hole spin state is inverted, opening the way toward its all-electrical manipulation.Peer reviewed: YesNRC publication: Ye