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<i>Planothidium juandenovense</i> sp. nov. (Bacillariophyta) from Juan de Nova (Scattered Islands, Mozambique Channel) and other tropical environments: a new addition to the <i>Planothidium delicatulum</i> complex
Get PDFPlanothidium juandenovense sp. nov. (Bacillariophyta) is described from the marine tropical environments of Juan de Nova I. (Mozambique Channel), Rodrigues I. (Mascarene Archipelago) and from Guam (Northern Mariana Is., Pacific). This small and relatively rare taxon has short multiseriate striae on the sternum valve (SV), hooked raphe valve (RV) terminal raphe endings and no SV cavum or hoof–shaped area. This taxon has similarities with Planothidium delicatulum (Kütz.) Round et Bukht. and Planothidium septentrionale (Østrup) Round et Bukht. ex Rumrich et al., but also differences: e.g. a relatively narrow and rhombic SV sternum, void of areolae, with vestigial radiate structures and an uninterrupted marginal SV elevated crest or ‘crista marginalis’. P. juandenovense sp. nov. is compared to some other Achnanthales with short SV striae. Cocconeis quarnerensis var. lanceolata Jurilj and Planothidium quarnerense f. rhombica (Giffen) comb. nov. may be close to our new taxon
PHAB toxins: a unique family of predatory sea anemone toxins evolving via intra-gene concerted evolution defines a new peptide fold
No full textSea anemone venoms have long been recognized as a rich source of peptides with interesting pharmacological and structural properties, but they still contain many uncharacterized bioactive compounds. Here we report the discovery, three-dimensional structure, activity, tissue localization, and putative function of a novel sea anemone peptide toxin that constitutes a new, sixth type of voltage-gated potassium channel (KV) toxin from sea anemones. Comprised of just 17 residues, κ-actitoxin-Ate1a (Ate1a) is the shortest sea anemone toxin reported to date, and it adopts a novel three-dimensional structure that we have named the Proline-Hinged Asymmetric β-hairpin (PHAB) fold. Mass spectrometry imaging and bioassays suggest that Ate1a serves a primarily predatory function by immobilising prey, and we show this is achieved through inhibition of Shaker-type KV channels. Ate1a is encoded as a multi-domain precursor protein that yields multiple identical mature peptides, which likely evolved by multiple domain duplication events in an actinioidean ancestor. Despite this ancient evolutionary history, the PHAB-encoding gene family exhibits remarkable sequence conservation in the mature peptide domains. We demonstrate that this conservation is likely due to intra-gene concerted evolution, which has to our knowledge not previously been reported for toxin genes. We propose that the concerted evolution of toxin domains provides a hitherto unrecognised way to circumvent the effects of the costly evolutionary arms race considered to drive toxin gene evolution by ensuring efficient secretion of ecologically important predatory toxins
Responses of an abyssal meiobenthic community to short-term burial with crushed nodule particles in the South-East Pacific
No full textIncreasing industrial metal demands due to rapid technological developments may drive the prospection and exploration of deep-sea mineral resources such as polymetallic nodules. To date, the potential environmental consequences of mining operations in the remote deep sea are poorly known. Experimental studies are scarce, especially with regard to the effect of sediment and nodule debris depositions as a consequence of seabed mining. To elucidate the potential effects of the deposition of crushed polymetallic nodule particles on abyssal meiobenthos communities, a short (11 days) in situ experiment at the Peru Basin in the South East Pacific Ocean was conducted. We covered abyssal, soft sediment with approx. 2cm of crushed nodule particles and sampled the sediment after eleven days of incubation at 4200m water depth. Short-term ecological effects on the meiobenthos community were studied including changes in their composition and vertical distribution in the sediment as well as nematode genus composition. Additionally, copper burden in a few similar-sized, but randomly selected nematodes was measured by means of µ-X-ray fluorescence. At the end of the experiment, 46±1% of the total meiobenthos occurred in the added crushed nodule layer while abundances decreased in the underlying 2cm compared to the same depth-interval in original, undisturbed sediments. Densities and community composition in the deeper 2–5cm layers remained similar in covered and undisturbed sediments. The migratory response into the added substrate was particularly seen in polychaetes (73±14%, relative abundance across all depth layers) copepods (71±6%), nauplii (61±9%) and nematodes (43±1%). While the dominant nematode genera in the added substrate did not differ from those in underlying layers or the undisturbed sediments, feeding type proportions in this layer were altered with a 9% decrease of non-selective deposit feeders and an 8% increase in epistrate feeders. Nematode tissue copper burden did not show elevated copper toxicity resulting from burial with crushed nodule particles. The results indicate that short-term substrate burial requires special attention with regard to ecological consequences of mineral extraction in the deep-sea
Slak-in-Du project. Inventarisatie van de mollusken in de duingebieden langs de Belgische Kust - 2014 Oostkust-Middenkust
Get PDFMovement behaviour of large female yellow European eel (<i>Anguilla anguilla</i> L.) in a freshwaterpolder area
Get PDFHalf the story: thermal effects on within-host infectious disease progression in a warming climate
No full textImmune defense is temperature dependent in cold-blooded vertebrates (CBVs) and thus directly impacted by global warming. We examined whether immunity and within-host infectious disease progression are altered in CBVs under realistic climate warming in a seasonal mid-latitude setting. Going further, we also examined how large thermal effects are in relation to the effects of other environmental variation in such a setting (critical to our ability to project infectious disease dynamics from thermal relationships alone). We employed the three-spined stickleback and three ecologically relevant parasite infections as a “wild” model. To generate a realistic climatic warming scenario we used naturalistic outdoors mesocosms with precise temperature control. We also conducted laboratory experiments to estimate thermal effects on immunity and within-host infectious disease progression under controlled conditions. As experimental readouts we measured disease progression for the parasites and expression in 14 immune-associated genes (providing insight into immunophenotypic responses). Our mesocosm experiment demonstrated significant perturbation due to modest warming (+2°C), altering the magnitude and phenology of disease. Our laboratory experiments demonstrated substantial thermal effects. Prevailing thermal effects were more important than lagged thermal effects and disease progression increased or decreased in severity with increasing temperature in an infection-specific way. Combining laboratory-determined thermal effects with our mesocosm data, we used inverse modeling to partition seasonal variation in Saprolegnia disease progression into a thermal effect and a latent immunocompetence effect (driven by nonthermal environmental variation and correlating with immune gene expression). The immunocompetence effect was large, accounting for at least as much variation in Saprolegnia disease as the thermal effect. This suggests that managers of CBV populations in variable environments may not be able to reliably project infectious disease risk from thermal data alone. Nevertheless, such projections would be improved by primarily considering prevailing thermal effects in the case of within-host disease and by incorporating validated measures of immunocompetence
Zeeschelde ‐ Tijarm Zwijnaarde: hydraulische impact oeverherstelling en dimensionering oeverbescherming
No full textA global ocean atlas of eukaryotic genes
Get PDFWhile our knowledge about the roles of microbes and viruses in the ocean has increased tremendously due to recent advances in genomics and metagenomics, research on marine microbial eukaryotes and zooplankton has benefited much less from these new technologies because of their larger genomes, their enormous diversity, and largely unexplored physiologies. Here, we use a metatranscriptomics approach to capture expressed genes in open ocean Tara Oceans stations across four organismal size fractions. The individual sequence reads cluster into 116 million unigenes representing the largest reference collection of eukaryotic transcripts from any single biome. The catalog is used to unveil functions expressed by eukaryotic marine plankton, and to assess their functional biogeography. Almost half of the sequences have no similarity with known proteins, and a great number belong to new gene families with a restricted distribution in the ocean. Overall, the resource provides the foundations for exploring the roles of marine eukaryotes in ocean ecology and biogeochemistry
Multimodel inference to quantify the relative importance of abiotic factors in the population dynamics of marine zooplankton
Get PDFThe effect of multiple stressors on marine ecosystems remains poorly understood and most of the knowledge available is related to phytoplankton. To partly address this knowledge gap, we tested if combining multimodel inference with generalized additive modelling could quantify the relative contribution of environmental variables on the population dynamics of a zooplankton species in the Belgian part of the North Sea. Hence, we have quantified the relative contribution of oceanographic variables (e.g. water temperature, salinity, nutrient concentrations, and chlorophyll a concentrations) and anthropogenic chemicals (i.e. polychlorinated biphenyls) to the density of Acartia clausi. We found that models with water temperature and chlorophyll a concentration explained ca. 73% of the population density of the marine copepod. Multimodel inference in combination with regression-based models are a generic way to disentangle and quantify multiple stressor-induced changes in marine ecosystems. Future–oriented simulations of copepod densities suggested increased copepod densities under predicted environmental changes