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Segmenting Trajectories by Movement States
Dividing movement trajectories according to different movement states of animals has become a challenge in movement ecology, as well as in algorithm development. In this study, we revisit and extend a framework for trajectory segmentation based on spatio-temporal criteria for this purpose. We adapt and extend the framework to the setting of segmentation according to the individual movement states of an object, in particular an animal. We implement the framework and evaluate it at the example of tracks of migrating geese.
Fries substraat in de syntaxis van het West-Fries: oorsprong en implicatie van het onderscheid tussen infinitief en gerundium en hun syntactische distributie
Spatial patterns of methanotrophic communities along a hydrological gradient in a riparian wetland
Microbial communities display a variety of biogeographical patterns mainly driven by large-scale environmental gradients. Here, we analysed the spatial distribution of methane-oxidizing bacteria (MOB) and methane oxidation in a strongly fluctuating environment. We investigated whether the spatial variability of the MOB community can be explained by an environmental gradient and whether this changes with different plot sizes. We applied a pmoA-specific microarray to detect MOB, measured methane oxidation, methane emissions and soil properties. All variables were measured in a 10 × 10 m, 1 × 1 m and 20 × 20 cm plot and interpreted using a geostatistical approach. Methane oxidation as well as MOB displayed spatial patterns reflected in the underlying flooding gradient. Overlapping and contrasting spatial patterns for type I and type II MOB suggested different ecological life strategies. With smaller plot size, the environmental gradient could not explain the variability in the data and local factors became more important. In conclusion, environmental gradients can generally explain variability in microbial spatial patterns; however, we think that this does not contribute to a mechanistic explanation for microbial diversity because the relevant scales for microorganisms are much smaller than those normally measured.
Song competition affects monoamine levels in sensory and motor forebrain regions of male Lincoln\'s sparrows (Melospiza lincolnii)
Male animals often change their behavior in response to the level of competition for mates. Male Lincoln's sparrows (Melospiza lincolnii) modulate their competitive singing over the period of a week as a function of the level of challenge associated with competitors' songs. Differences in song challenge and associated shifts in competitive state should be accompanied by neural changes, potentially in regions that regulate perception and song production. The monoamines mediate neural plasticity in response to environmental cues to achieve shifts in behavioral state. Therefore, using high pressure liquid chromatography with electrochemical detection, we compared levels of monoamines and their metabolites from male Lincoln's sparrows exposed to songs categorized as more or less challenging. We compared levels of norepinephrine and its principal metabolite in two perceptual regions of the auditory telencephalon, the caudomedial nidopallium and the caudomedial mesopallium (CMM), because this chemical is implicated in modulating auditory sensitivity to song. We also measured the levels of dopamine and its principal metabolite in two song control nuclei, area X and the robust nucleus of the arcopallium (RA), because dopamine is implicated in regulating song output. We measured the levels of serotonin and its principal metabolite in all four brain regions because this monoamine is implicated in perception and behavioral output and is found throughout the avian forebrain. After controlling for recent singing, we found that males exposed to more challenging song had higher levels of norepinephrine metabolite in the CMM and lower levels of serotonin in the RA. Collectively, these findings are consistent with norepinephrine in perceptual brain regions and serotonin in song control regions contributing to neuroplasticity that underlies socially-induced changes in behavioral state.
Microbiology of wetlands
Wetlands are ecologically as well as economically important systems due to their high productivity, their nutrient (re)cycling capacities, and their prominent contribution to global greenhouse gas emissions. Being on the transition between terrestrial and—aquatic ecosystems, wetlands are buffers for terrestrial run off thereby preventing eutrophication of inland as well as coastal waters. The close proximity of oxic–anoxic conditions, often created by wetland plant roots, facilitates the simultaneous activity of aerobic as well as anaerobic microbial communities. Input of nutrients and fast recycling due to active aerobes and anaerobes makes these systems highly productive and therefore attractive for humans as well as many other organisms. Wetlands globally are under high pressure due to anthropogenic activities as well as climate change. Changes of land-use as well as altered hydrology due to climate change will lead to disturbance and loss of these habitats. However, the diversity and functioning of microbial communities in wetland systems is highly underexplored in comparison to soils and aquatic ecosystems.
Aquatic grazers reduce the establishment and growth of riparian plants along an environmental gradient
Summary
The establishment of riparian plants is determined by abiotic conditions and grazing, although it is usually presumed that the former are most important. We tested the impact of aquatic grazers on the survival and growth of establishing riparian plants and whether the impact of grazing interacts with abiotic conditions.
We conducted an experiment across 10 Dutch wetlands, covering a large range of water depth and nutrient availability. We introduced 1-year-old plants of an emergent (common reed, Phragmites australis) and a floating (water soldier, Stratiotes aloides) species in individual enclosures (n = 5 per site) that excluded predominantly waterbirds, which were the most abundant grazers, and on adjacent unprotected plots. Survival and growth were measured during one growing season.
Grazing reduced growth (as biomass) of Phragmites and Stratiotes by a mean of 25 and 60%, respectively. Grazing decreased survival of Stratiotes, but not of Phragmites. Shallow water, water-level fluctuations, eutrophic conditions and enough light favoured both growth and survival of Phragmites. Growth of Stratiotes was unaffected by these factors, but they reduced its survival. For both species, grazing effects on biomass were consistent across environmental conditions, but for Phragmites, grazing effects on survival were influenced by abiotic conditions.
We conclude that aquatic grazers significantly reduce the establishment and growth of macrophytes in the riparian zone over a wide range of environmental conditions.
The ecology of the riverine Garra species (Teleostei, Cypriniformes) in reservoirs of the semi-arid highlands of northern Ethiopia: temporal dynamics of feeding activity
Garra species are among the most abundant fish in small rivers of northern Ethiopia. Many manmade reservoirs in the region have been colonized by Garra, which often are the only fish species present and have become very abundant. Little is known about the ecology of these reservoir populations of riverine species. In this study we investigated the distribution patterns and gut fullness of 2 dominant species, G. blanfordii and G. geba, in 3 recently created reservoirs (Gereb Awso, Tsinkanet, and Mai Gassa I) in Tigray, northern Ethiopia. Species composition differed among reservoirs. Our data on fish catch densities and the fullness of the foregut suggest that the ecology of the Garra populations in the reservoirs is likely influenced by the avoidance of predation by birds. G. blanfordii, and to a lesser extent G. geba, foraged most actively after sunset.