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Spinal degeneration is associated with lumbar multifidus morphology in secondary care patients with low back or leg pain
Get PDFAssociations between multifidus muscle morphology and degenerative pathologies have been implied in patients with non-specific low back pain, but it is unknown how these are influenced by pathology severity, number, or distribution. MRI measures of pure multifidus muscle cross-sectional area (CSA) were acquired from 522 patients presenting with low back and/or leg symptoms in an outpatient clinic. We explored cross-sectional associations between the presence, distribution, and/or severity of lumbar degenerative pathologies (individually and in aggregate) and muscle outcomes in multivariable analyses (beta coefficients [95% CI]). We identified associations between lower pure multifidus muscle CSA and disc degeneration (at two or more levels): − 4.51 [− 6.72; − 2.3], Modic 2 changes: − 4.06 [− 6.09; − 2.04], endplate defects: − 2.74 [− 4.58; − 0.91], facet arthrosis: − 4.02 [− 6.26; − 1.78], disc herniations: − 3.66 [− 5.8; − 1.52], and when > 5 pathologies were present: − 6.77 [− 9.76; − 3.77], with the last supporting a potential dose–response relationship between number of spinal pathologies and multifidus morphology. Our findings could hypothetically indicate that these spinal and muscle findings: (1) are part of the same degenerative process, (2) result from prior injury or other common antecedent events, or (3) have a directional relationship. Future longitudinal studies are needed to further examine the complex nature of these relationships
Global proteome analyses of phosphorylation and succinylation of barley root proteins in response to phosphate starvation and recovery
Get PDFPhosphate (Pi) stress is an important environmental factor that limits plant growth and development. Of various posttranslational modifications (PTMs), protein phosphorylation and succinylation are the two most important PTMs that regulate multiple biological processes in response to Pi stress. However, these PTMs have been investigated individually but their interactions with proteins in response to Pi stress remain poorly understood. In this study, to elucidate the underlying mechanisms of protein phosphorylation and succinylation in response to Pi stress, we performed a global analysis of the barley root phosphorylome and succinylome in Pi starvation and recovery stages, respectively. A total of 3,634 and 884 unique phosphorylated and succinylated proteins, respectively, corresponding to 11,538 and 2,840 phospho- and succinyl-sites, were identified; of these, 275 proteins were found to be simultaneously phosphorylated and succinylated. Gene Set Enrichment Analysis was performed with a Kyoto Encyclopedia of Genes and Genomes pathway database revealing pathways that significantly enriched in the phosphorylome and succinylome. Such pathways, were dynamically regulated by Pi starvation and recovery treatments, and could be partitioned into distinct metabolic processes. In particular, phosphorylated proteins related to purine, the mitogen-activated protein kinase (MAPK) signaling pathway, pyrimidine, and ATP-binding cassette (ABC) transporters were upregulated in both Pi deprivation and recovery stages. Succinylated proteins, significantly upregulated by both Pi starvation and recovery, were enriched in nitrogen metabolism and phenylpropanoid biosynthesis. Meanwhile, succinylated proteins that were significantly downregulated by both Pi starvation and recovery were enriched in lysine degradation and tryptophan metabolism. This highlighted the importance of these metabolic pathways in regulating Pi homeostasis. Furthermore, protein–protein interaction network analyses showed that the response of central metabolic pathways to Pi starvation and recovery was significantly modulated by phosphorylation or succinylation, both individually and together. In addition, we discovered relevant proteins involved in MAPK signaling and phenylpropanoid biosynthetic pathways existing in interactions between phosphorylated and succinylated proteins in response to Pi recovery. The current study not only provides a comprehensive analysis of phosphorylated and succinylated proteins in plant responses to Pi starvation and recovery, but also reveals detailed interactions between phosphorylated and succinylated proteins in barley roots
Correction to: Muscle B mode ultrasound and shear-wave elastography in idiopathic inflammatory myopathies (SWIM): criterion validation against MRI and muscle biopsy findings in an incident patient cohort
Get PDFCorrection to: BMC Rheumatology (2022) 6:47. https://doi.org/10.1186/s41927-022-00276-
Synucleinopathy in amyotrophic lateral sclerosis: A potential avenue for antisense therapeutics?
Get PDFAmyotrophic lateral sclerosis (ALS) is the most common adult-onset motor neuron disease classified as both a neurodegenerative and neuromuscular disorder. With a complex aetiology and no current cure for ALS, broadening the understanding of disease pathology and therapeutic avenues is required to progress with patient care. Alpha-synuclein (αSyn) is a hallmark for disease in neurodegenerative disorders, such as Parkinson’s disease, Lewy body dementia, and multiple system atrophy. A growing body of evidence now suggests that αSyn may also play a pathological role in ALS, with αSyn-positive Lewy bodies co-aggregating alongside known ALS pathogenic proteins, such as SOD1 and TDP-43. This review endeavours to capture the scope of literature regarding the aetiology and development of ALS and its commonalities with “synucleinopathy disorders”. We will discuss the involvement of αSyn in ALS and motor neuron disease pathology, and the current theories and strategies for therapeutics in ALS treatment, as well as those targeting αSyn for synucleinopathies, with a core focus on small molecule RNA technologies
COVAD survey 2 long-term outcomes: unmet need and protocol
Get PDFVaccine hesitancy is considered a major barrier to achieving herd immunity against COVID-19. While multiple alternative and synergistic approaches including heterologous vaccination, booster doses, and antiviral drugs have been developed, equitable vaccine uptake remains the foremost strategy to manage pandemic. Although none of the currently approved vaccines are live-attenuated, several reports of disease flares, waning protection, and acute-onset syndromes have emerged as short-term adverse events after vaccination. Hence, scientific literature falls short when discussing potential long-term effects in vulnerable cohorts. The COVAD-2 survey follows on from the baseline COVAD-1 survey with the aim to collect patient-reported data on the long-term safety and tolerability of COVID-19 vaccines in immune modulation. The e-survey has been extensively pilot-tested and validated with translations into multiple languages. Anticipated results will help improve vaccination efforts and reduce the imminent risks of COVID-19 infection, especially in understudied vulnerable groups
Deep network with score level fusion and inference-based transfer learning to recognize leaf blight and fruit rot diseases of eggplant
Get PDFEggplant is a popular vegetable crop. Eggplant yields can be affected by various diseases. Automatic detection and recognition of diseases is an important step toward improving crop yields. In this paper, we used a two-stream deep fusion architecture, employing CNN-SVM and CNN-Softmax pipelines, along with an inference model to infer the disease classes. A dataset of 2284 images was sourced from primary (using a consumer RGB camera) and secondary sources (the internet). The dataset contained images of nine eggplant diseases. Experimental results show that the proposed method achieved better accuracy and lower false-positive results compared to other deep learning methods (such as VGG16, Inception V3, VGG 19, MobileNet, NasNetMobile, and ResNet50)
A simultaneous diagnosis method for power switch and current sensor faults in Grid-Connected Three-Level NPC inverters
No full textA simultaneous diagnosis method for power switch open-circuit faults and current sensor faults of grid-connected three-level neutral point clamped (NPC) inverters is proposed herein. First, by designing the adaptive reaching law and reducing the steady-state resonance, a novel interval sliding model observer is developed to track and estimate the three-phase currents accurately and rapidly. Next, a faulty phase detection scheme using an adaptive threshold is proposed to achieve sensitive and robust detection results. Also, the measured three-phase currents sum and estimated three-phase currents sum are used to distinguish power switch open-circuit faults and current sensor faults. Subsequently, a faulty switch location method and the current sensor fault type identification method are proposed, using some of the same identification variables. Finally, combining the faulty phase detection variables with the identification methods ensures the feasibility of the detection and identification of 12 open-circuit faults and 9 current sensor faults. The hardware-in-the-loop (HIL) test results are performed to validate the effectiveness and robustness of the proposed method
Cooling effects of urban vegetation: The role of golf courses
Get PDFIncreased heat in urban environments, from the combined effects of climate change and land use/land cover change, is one of the most severe problems confronting cities and urban residents worldwide, and requires urgent resolution. While large urban green spaces such as parks and nature reserves are widely recognized for their benefits in mitigating urban heat islands (UHIs), the benefit of urban golf courses is less established. This is the first study to combine remote sensing of golf courses with Morphological Spatial Pattern Analysis (MSPA) of vegetation cover. Using ArborCamTM multispectral, high-resolution airborne imagery (0.3 × 0.3 m), this study develops an approach that assesses the role of golf courses in reducing urban land surface temperature (LST) relative to other urban land-uses in Perth, Australia, and identifies factors that influence cooling. The study revealed that urban golf courses had the second lowest LST (around 31 °C) after conservation land (30 °C), compared to industrial, residential, and main road land uses, which ranged from 35 to 37 °C. They thus have a strong capacity for summer urban heat mitigation. Within the golf courses, distance to water bodies and vegetation structure are important factors contributing to cooling effects. Green spaces comprising tall trees (>10 m) and large vegetation patches have strong effects in reducing LST. This suggests that increasing the proportion of large trees, and increasing vegetation connectivity within golf courses and with other local green spaces, can decrease urban LST, thus providing benefits for urban residents. Moreover, as golf courses are useful for biodiversity conservation, planning for new golf course development should embrace the retention of native vegetation and linkages to conservation corridors
Genome-wide association mapping of nutritional traits for designing superior chickpea varieties
Get PDFMicronutrient malnutrition is a serious concern in many parts of the world; therefore, enhancing crop nutrient content is an important challenge. Chickpea (Cicer arietinum L.), a major food legume crop worldwide, is a vital source of protein and minerals in the vegetarian diet. This study evaluated a diverse set of 258 chickpea germplasm accessions for 12 key nutritional traits. A significant variation was observed for several nutritional traits, including crude protein (16.56–24.64/100 g), β-Carotene (0.003–0.104 mg/100 g), calcium (60.69–176.55 mg/100 g), and folate (0.413–6.537 mg/kg). These data, combined with the available whole-genome sequencing data for 318,644 SNPs, were used in genome-wide association studies comprising single-locus and multi-locus models. We also explored the effect of varying the minor allele frequency (MAF) levels and heterozygosity. We identified 62 significant marker-trait associations (MTAs) explaining up to 28.63% of the phenotypic variance (PV), of which nine were localized within genes regulating G protein-coupled receptor signaling pathway, proteasome assembly, intracellular signal transduction, and oxidation–reduction process, among others. The significant effect MTAs were located primarily on Ca1, Ca3, Ca4, and Ca6. Importantly, varying the level of heterozygosity was found to significantly affect the detection of associations contributing to traits of interest. We further identified seven promising accessions (ICC10399, ICC1392, ICC1710, ICC2263, ICC1431, ICC4182, and ICC16915) with superior agronomic performance and high nutritional content as potential donors for developing nutrient-rich, high-yielding chickpea varieties. Validation of the significant MTAs with higher PV could identify factors controlling the nutrient acquisition and facilitate the design of biofortified chickpeas for the future
A community approach for pathogens and their arthropod vectors (ticks and fleas) in cats of sub-Saharan Africa
Get PDFBackground
Arthropod-borne pathogens and their vectors are present throughout Africa. They have been well studied in livestock of sub-Saharan Africa, but poorly studied in companion animals. Given their socioeconomic importance, the African Small Companion Animal Network (AFSCAN), as part of the WSAVA Foundation, initiated a standardized multi-country surveillance study.
Methods
In six countries (Ghana, Kenya, Nigeria, Tanzania, Uganda, and Namibia) in both rural and urban settings, 160 infested cats were sampled to assess their ectoparasite community (ticks and fleas), as well as the micro-parasite prevalence within those ectoparasites (60 and 118 pools of ticks and fleas, respectively) and blood (276 cats, including 116 non-infested).
Results
Almost two thirds of all infested cats originated from Tanzania and Kenya. Despite the large macro-geographical variation, no consistent difference was found in ectoparasite diversity and numbers between East and West Africa. Far more flea-infested than tick-infested cats were found. The most dominant ectoparasite was Ctenocephalides felis. Among the ticks, the exophilic Haemaphysalis spp. were the commonest, including species that are not typically linked with companion animals (Haemaphysalis spinulosa and Haemaphysalis elliptica). The most prevalent pathogens found in the blood and fleas were Bartonella henselae and Mycoplasma haemofelis. In the ticks, the dog-associated Hepatozoon canis was most commonly found. A high degree of co-parasitism was found in all countries and habitats.
Conclusions
Our continent-wide standardized field study highlights the cat’s potential to serve as a reservoir of pathogens that can be transmitted to humans or livestock, especially when cats are expected to become more commonly kept in African villages and towns