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Field-based invasion degree for Grand Benare, Reunion Island (2022-2023)
No full textField-based invasion degree used in the paper Rouget et al. (2024) "From planning to implementation: a multi-stakeholder partnership for managing plant invasions in tropical island ecosystems", Biological Invasions
https://doi.org/10.1007/s10530-024-03454-
Data for "Diachronic assessment of soil organic C and N dynamics under long-term no-till cropping systems in the tropical upland of Cambodia"
No full textThese are the raw data of the paper "Diachronic assessment of soil organic C and N dynamics under long-term no-till cropping systems in the tropical upland of Cambodia” authored by Vira Leng, Rémi Cardinael, Florent Tivet, Vang Seng, Phearum Mark,
Pascal Lienhard, Titouan Filloux, Johan Six, Lyda Hok, Stéphane Boulakia,
Clever Briedis, João Carlos de Moraes Sá, Laurent Thuriè
Consolidated database on trees in control plots in the M'Baïki forests (CAR) between 1982 and 2022
No full textContains data collected on three control plots:
plot 13 (plot 3 of Boukoko 1)
plot 16 (plot 6 of Boukoko 2)
plot 24 (plot 4 of La Lolé)
The main following variables were recorded:
tree number, species name, tree coordinates on the plots, adjusted diameters, original diameters, observations, status and corresponding measurement dates.
This is a dataset repository for the manuscript:
Bénédet, F., Gourlet-Fleury, S., Allah-Barem, F., Baya, F., Beina, D., Cornu, G., Dimanche, L., Dubiez, É., Forni, É., Freycon, V., Mortier, F., Ouédraogo, D.Y., Picard, N., Rossi, V., Semboli, O., Yalibanda, Y., Yongo-Bombo, O. & Fayolle, A. 40 years of forest dynamics and tree demography in an intact tropical forest at M’Baïki in central Africa. Sci Data 11, 734 (2024). doi: 10.1038/s41597-024-03577-6</a
sRNA dataset of PKWxPKW banana plant (GWT-9)
No full textDeep sequencing of sRNA from self-pollinated PKW plant.
Endogenous banana streak virus (eBSV) genotype for GWT-9 is (OL1 + OL2 ; GF7 + GF9) where OL1 stands for the infective allele of endogenous Banana streak Obino l'Ewai virus (eBSOLV-1) and OL2 for the non-infective allele (eBSOLV-2), GF7 for the infective allele of endogenous Banana streak Goldfinger virus (eBSGFV-7) and GF9 for the non-infective allele (eBSGFV-9). This plant is homozygous for the endogenous Banana streak Imové virus (eBSIMV)
A dashboard of sustainability indicators for benchmarking in the West African cashew value chain
No full textThe proposed sustainability assessment framework and its implementation as an Excel tool are intended for concerned operators as a sustainability management system, to assess improvements and perform benchmarking with alternative value chains, such as the dominant one where Africa-sourced raw cashew nuts (RCN) are processed in Vietnam. Background data on global cashew value chains, included in the tool, would be useful for benchmarking and eventually for corporate sustainability reporting.
The framework addresses the sustainability concerns of cashew processors regarding: i) the environmental impacts of their supply and value chain, ii) their real cost after taking into account environmental externalities, and iii) their socio-economic performance; in a benchmarking context. The system of indicators draws from key sustainability frameworks and tools, including UN’s Sustainable Development Goals, FAO Tool for Agroecology Performance Evaluation, and EU Value Chain Analysis for Development.
The built-in data represents the period 2020-202
sRNA dataset of PKWxPKW banana plant (GWT-10)
No full textDeep sequencing of sRNA from self-pollinated PKW plant
GWT-10 is homozygous for the non-infective allele of endogenous Banana streak Obino l'Ewai virus (eBSOLV-2), the non-infective allele of endogenous Banana streak Goldfinger virus (eBSGFV-9) and the endogenous Banana streak Imové virus (eBSIMV)
sRNA dataset of PKWxPKW banana plant (GWT-11)
No full textDeep sequencing of sRNA from self pollinated PKW plant
GWT-11 is homozygous for the non-infective allele of endogenous Banana streak Obino l'Ewai virus (eBSOLV-2), heterozygous for the endogenous Banana streak Goldfinger virus with the non-infective (eBSGFV-9) and the infective (eBSGFV-7) alleles and homozygous for the endogenous Banana streak Imové virus (eBSIMV)
TropGene Rubbertree
No full textThe data come from the TropGeneDB CIRAD information system (https://tropgenedb.cirad.fr/tropgene/JSP/index.jsp).
TropGeneDB contains data from studies on tropical and mediterranean plants for various kinds of topics such as marker, QTL, genotype, genetic, phenotype, cartography (genetic, physical and linkage disequilibrium maps), linkage disequilibrium, association and germplasm.
The plants concerned are banana, breadfruit, citrus, cocoa, coconut palm, cotton, oil palm, rice, rubber, sorghum and sugarcane.
The IS has a database per plant. The data were produced by CIRAD researchers or by CIRAD researchers and colleagues associated in research projects.
All The data have been published.
The RUBBERTREE data in this dataset produced between 1999 and 2018 were extracted from the TROPGENE_RUBBERTREE database in tabulated text format files. There is a file for each type of data which name includes the data type. Each line of a file has several columns describing the study (title, description, year, country, place, contact) it belongs to.
The tropgene_rubbertree_references‧txt file contains the references of the scientific publications on these data
Habitat sharing and interspecies interactions in caves used by bats in the Republic of Congo
No full textThe first file shows the raw results of the camera traps after processing with Megadetector and Timelapse. The second file selects only positive detections with an independent detection time of 30 min. The R scripts allow you to redo all the analyses and figures based on the raw data file (follow the script number). The figures and analyses presented in the article can also be redone using scripts 3 and 4 with the help of cleaned data
Jeu de données sur le devenir du chlordécone dans les réseaux trophiques du sol dans un agroécosystème bananier en Martinique
No full text[FR] Données sur les ratios isotopiques (C et N) et sur la contamination de la macrofaune du sol par la chlordécone (CLD) et un de ses produits de transformation : le chlordécole (CLDOH). Les invertébrés du sol ont été collectés sur les parcelles du projet BANABIO situées sur la station expérimentale de Rivière Lézarde. Le delta 15 et le Delta 13C ainsi que les niveaux de contamination en CLD et CLDOH ont été mesurés sur 14 espèces d'invertébrés et un lézard prédateurs représentatifs des réseaux trophiques du sol des agroécosytèmes de Martinique. Pour chaque espèce, plusieurs individus ont été regroupés afin d'atteindre une masse suffisante pour permettre l'analyse des 2 molécules étudiées. Les analyses de contamination ont été réalisées par l'équipe Pesticides et biotoxines marines (PBM) de l'Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES) à Maison-Alfort (France). Les analyses isotopiques ont été analysées à l'Atelier de Quantifications Isotopiques (AQUI) de l'unité de recherche B&PMP à Montpellier, France.
[EN] Data on isotope ratios (C and N) and contamination of soil macrofauna by chlordecone (CLD) and one of its transformation products: chlordecole (CLDOH). Soil invertebrates were collected on the BANABIO project plots located on the Rivière Lézarde experimental station. Delta 15 and Delta 13C, as well as CLD and CLDOH contamination levels, were measured on 14 invertebrate species and one predatory lizard representative of soil food webs in Martinique's agroecosystems. For each species, several individuals were grouped together in order to reach a sufficient mass for analysis of the 2 molecules studied. Contamination analyses were carried out by the Pesticides and Marine Biotoxins (PBM) team of the Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES) in Maison-Alfort (France). Isotopic analyses were performed at the Atelier de Quantifications Isotopiques (AQUI) of the B&PMP research unit in Montpellier, France.<p