imagine (Institute of molecular genetics and genetic engineering)
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    Harnessing the power of green and rooibos tea aqueous extracts for obtaining colored bioactive cotton and cotton/flax fabrics intended for disposable and reusable medical textiles

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    This study harnesses the potential of green and rooibos tea (GT and RT) aqueous extracts for obtaining colored bioactive cotton and cotton/flax fabrics with intended applications in medical textiles. The chemical characterization of the tea aqueous extracts was conducted using LC–HRMS/MS analysis, resulting in the detection of 129 bioactive compounds. GT demonstrates 2.2 times higher total phenolic content, a 14.7% lower total flavonoid content, and 3 times higher reducing power than RT. Both extracts exhibit excellent antioxidant activity (> 99.8%) and antibacterial activity (99.99%) against both tested bacteria, E. coli and S. aureus. Cotton and cotton/flax fabrics functionalized with GT or RT display outstanding antioxidant (99.63–100%) and antibacterial activity against S. aureus (90.95–99.33%), and high color strength values (5.48–11.08). The cytotoxicity assay confirmed the non-cytotoxic nature of 100% cotton fabric functionalized with GT. This sample additionally demonstrated an antibacterial reduction against E. coli and S. aureus higher than 99% and the highest release of bioactive compounds rendering it highly suitable for disposable medical textiles-wound dressings. To address the shortcomings of functionalized fabrics observed after washing, including decreased antioxidant activity (55.8–81.0%), diminished bacterial reduction, and reduced color strength values (0.80–1.36), copper-based nanoparticles (CuNPs) were biosynthesized in situ on their surfaces utilizing GT and RT aqueous extracts as reducing agents. The successful fabric decoration with CuNPs was proven by quantifying Cu2+ uptake, and characterization of the surface chemical composition and morphology of CuNPs. Colored CuNPs-decorated cotton and cotton/flax fabrics exhibited excellent antioxidant (> 98.28%) and antibacterial (99.99%) activity that remained almost unchanged after washing (94.44–98.90% and 99.99%, respectively). These fabrics are non-cytotoxic and characterized by small quantities of released bioactive compounds and Cu2+ ions into the physiological saline solution and hold promise as protective, reusable medical textiles suitable for producing gowns and drapes

    Tumor necrosis factor alpha gene polymorphisms -238g˃a and -308g˃a as genetic markers for the development of alcohol related liver cirrhosis

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    Alcohol-related liver cirrhosis (ALC) is a progressive liver disease that may result from excessive alcohol abuse. Endotoxemia induced by ethanol consumption represents a strong stimulus for Kupffer cells to secrete Tumor necrosis factor-α (TNF-α). TNF-α induces an inflammatory response that often leads to chronic liver injury. It plays a key role in the pathogenesis of alcohol-related liver disease. Our study aimed to estimate the association of ΤNF-α promoter polymorphisms at two positions (-238G˃A and -308G˃A) with ALC susceptibility from one group of ALC patients from Serbia. A total of 118 patients with ALC and 131 sex and age-matched healthy controls were clinically examined and genetically tested. DNA was extracted from peripheral blood lymphocytes, and genotyping was performed using PCR-RFLP for both promoter variants. We determined the TNF-α genotypes of each participant by the presence of the relevant DNA fragments on agarose gel. Groups were compared using the Chi-Square test; binary logistic regression was used to obtain odds ratios. Concerning the -238G>A variant, a significant association between A allele carriers and risk of ALC (OR=2.36, 95% CI=1.15- 4.83; p=0.019) was observed. We found only one patient with an AA genotype, so we compared the combined AA and GA genotypes with GG genotype. No significant differences were found in either genotype or allelic frequencies of the –308 TNF-α gene variant between the patients and controls (allele frequencies 15.7% vs. 13.4%, p=0.463). The -238 TNF-α –A allele was associated with a higher risk of developing ALC in our group of patients with ALC from Serbia. This variant could represent one of the genetic factors that confer a predisposition to develop ALC.ND B&H SYMPOSIUM OF LABORATORY GENETICISTS AND MOLECULAR BIOLOGISTS (WITH INTERNATIONAL PARTICIPATION) 10TH - 11TH MAY 2024, BANJA LUKA, BOSNIA AND HERZEGOVIN

    Establishing an extracellular vesicle isolation protocol for a beneficial plant fungus

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    Introduction: Fusarium solani strain K (FsK) is a beneficial fungal endophyte which can help tomato plants resist different biotic (root and foliar pathogens) and abiotic stressors (drought, salinity). We have recently established that FsK is able to transmit sRNAs to Nicotiana benthamiana, triggering systemic RNA silencing and DNA methylation of a reporter gene. The mechanistic details of how the sRNAs are being transmitted still remain elusive, but extracellular vesicles (EVs) are an emerging carrier of sRNAs. Methods: During this study we aim to establish an effective extracellular vesicle isolation protocol for FsK. To isolate the EVs using as starting material fungal liquid culture we applied differential centrifugation combined with density gradient purification method. For characterization of the isolated vesicles, the highly used NTA method was performed. Additionally, a lipid characterization assay was also applied. Results: After ultracentrifugation (100.000 g) the resulting pellet was separated in iodixanol density gradient, and 10 fractions were washed and analyzed. NTA analysis revealed the presence of two populations of particles. Starting from 250 mL of 4 days old liquid culture of FsK, the concentration of particles was 10^10 particles/ml and 10^12 particles/ml in less dense and denser fractions, respectively. The less dense fraction contained particles of 150 nm average size, while in denser fractions the average particle size was 115 nm. Lipid content of isolated particles was also confirmed. Conclusion: Using differential centrifugation combined with density gradient purification method, high yield of particles was obtained from F.solani liquid culture. Two populations of vesicles of different average sizes and densities were detected. Both populations had the size range expected for EVs. Future experiments can entail the investigation of EV-associated sRNAs and their functionality during cross-kingdom RNAi phenomena.Book of abstract: 2nd MOV E Symposium, 8-11 October 2024, Belgrade, Serbi

    Prodromal Memory Impairment and Gut Dysbiosis in A53T Transgenic Model of Parkinson’s Disease – Emphasis on Social Microenvironment

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    Most transgenic mouse models of Parkinson’s disease (PD) do not exhibit relevant pre-motor symptoms such as cognitive decline in the visuo-spatial domain and clinically significant dysbiosis. Additionally, given that neurobiological processes can be altered through the brain-gut axis, co-housing healthy animals along those genetically altered to model neurodegenerative diseases may affect both phenotypes, potentially compromising the validity of pre-clinical research. This study aims to address: 1) the potential of Hualpha-Syn(A53T) transgenic mice, line G2-3 as a model of spontaneous dysbiosis and prodromal cognitive decline, and 2) the overlooked impact of shared microenvironment on the expression of clinically relevant indicators of prodromal PD. Short-term spatial memory and GM composition were evaluated in Hualpha- Syn(A53T) transgenic mice, line G2-3, which over-express human α-synuclein and are the only model of PD that exhibits prodromal constipation. Four groups of animals were formed: Transgenic (Tg+) mice and non-transgenic (Tg-) littermates in mixed-group housing (MGH) and single-group housing (SGH; starting from postnatal day 30). C57BL/6J mice were used as additional controls. Cognitive status and memory deficits were assessed using Novel Object Recognition Test along with Object Relocation Test in 6-month-old animals. Fecal samples were analyzed via 16S rRNA sequencing. Results indicate that: 1) Tg+ animals exhibit GM composition similar to that obtained in clinical settings such as an increase of bacteriodes, lactobacillus and bifidobacterium; 2) Tg+ animals exhibit memory impairment in visuo-spatial domain regardless of housing conditions 3) Tg- exhibited memory deficits in the spatial domain only, in MGH, while in SGH no deficits were detected; 4) β diversity was stable regardless of housing conditions, while α diversity differed in Tg- animals depending on the microenvironment. Certain species and genus were affected in both Tg+ and Tg- animals. This study reveals the potential of Hualpha-Syn(A53T) transgenic line as a model for prodromal dysbiosis and cognitive decline in PD. Furthermore, it indicates that the observed increase of “good bacteria” in PD-related pathology may be a prodromal symptom of the disease, and not solely a consequence of probiotic or PD therapy application, as it is suggested in clinical studies. Lastly, it highlights the influence of social microenvironment on the detectability of relevant indicators in pre-clinical settings.Book of abstracts: Belgrade Neuroscience Next Hub 2024 with international participation 24-25 May 2024. Belgrade, Serbi

    MORPHOLOGICAL CHANGES OF STAPHYLOCOCCUS AUREUS AND SALMONELLA ENTERITIDIS UPON EXPOSURE TO THE EXTRACT OBTAINED FROM PLEUROTUS OSTREATUS MUSHROOM

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    In last decades, bacterial resistance to first choice antibiotics has been drastically increasing, therefore, the research of new antimicrobial substances is of great importance. This rising problem with bacterial resistance to existing antibiotics affects not only the health care institutes but also food plants. S. aureus and S. enteritidis pose a number of challenges to the food industry and cause foodborne illness in humans. In addition, due to their favourable elemental composition, oyster mushrooms (Pleurotus sp.) are a reservoir of bioactive compounds that give them remarkable antibacterial potential. P. ostreatus is of great economic importance and is the second most cultivated edible mushroom, therefore information about its possible targets on bacterial cells is of great importance for use as a dietary supplement or medicinal purposes. The results of the antibacterial assay showed that tested bacterial strains were susceptible to the methanol extract of P. ostreatus (PoME), while microbicidal activity was only detected against Gram-positive bacteria. Scanning electron microscopy (SEM) micrographs suggested that extract acted on cytoplasmic membrane of S. aureus, while the cell envelope of S. Enteritidis was the most likely target. Natural extracts may outperform individual bioactive compounds due to the synergistic interaction between the metabolites, which can enhance the effects of the individual components. Extracts rich in antibacterials are emerging as alternatives to synthetic antibiotics in the food and health sectors. Among these, crude mushroom extracts are particularly sought after for their diverse bioactive ingredients, as they can combat resistant strains of bacteria due to their different targets and modes of action. PoME can be used as an effective antimicrobial agent, suitable for applications aiming to eradicate foodborne pathogens, thus enhancing food safety.Book of abstract: From biotechnology to human and planetary health XIII congress of microbiologists of Serbia with international participation Mikromed regio 5, ums series 24: 4th – 6th april 2024, Mona Plaza hotel, Belgrade, Serbi

    DESCRIPTION OF A NEW POTENTIAL AGGREGATION FACTOR FROM THE STREPTOCOCCUS THERMOPHILUS GENOME

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    Autoaggregation, the ability to self-aggregate, is widespread among both Gram-positive and Gram-negative bacteria. The functional role of aggregation is not fully understood, but it is believed to be involved in the adaptation of bacteria to environmental conditions (PMID: 31294207). One interesting class of compounds responsible for the aggregation of lactic acid bacteria is aggregation factors—surface high-molecular-weight proteins rich in threonine and lysine (PMID: 30027759). Recently, our research group discovered a new strain of Streptococcus thermophilus in the mountainous regions of Serbia, exhibiting an aggregation phenotype. Aggregation phenotype was confirmed visually and using microscopy. Complete genome of Agg+ strain was sequenced using NGS and a gene encoding a potential aggregation factor, which was named aggS was identified. The predicted threonine (12.5%) and lysine (10.5%) rich protein contains 2367 amino acids, with an average molecular weight of 255986.63 Da. AggS also contains two cysteine residues,whereas previously well-described aggregation factors of this type did not contain any cysteine residues. The predicted protein includes an N-terminal YSIRK-like signal sequence and an LPXTG cell wall anchor domain. It has 6 Mucin binding domain repeats alternating with 6 Mub B2-like domain repeats. Additionally, we found a region resembling an ice-binding domain. Given that these bacteria endure prolonged periods of low temperatures, it can be speculated that this surface membrane protein also helps the bacteria withstand freezing. The fact that the alignment using BLASTp revealed AggS to be most closely related to an uncharacterised protein from the genome of Lactococcus garvieae, along with the discovery of a transposase gene sequence upstream of the gene, suggests that the aggregation factor was likely acquired through horizontal gene transfer. We plan to clone it into a shuttle vector and investigate the aggregation phenotype using a heterologous expression system in Lactococcus lactis, as well as explore its other functions.Book of abstract: From biotechnology to human and planetary health XIII congress of microbiologists of Serbia with international participation Mikromed regio 5, ums series 24: 4th – 6th april 2024, Mona Plaza hotel, Belgrade, Serbi

    MEDICINAL MUSHROOM EXTRACTS ATTENUATE PSEUDOMONAS AERUGINOSA QUORUM SENSING AND VIRULENCE

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    Pseudomonas aeruginosa has been recognized as a priority pathogen by World Health Organization, due to the emergence of multidrug-resistant (MDR) strains. Thus, new treatment options such as antivirulence strategy is urgently needed. This strategy is based on the disruption of quorum sensing (QS) activity of this pathogen. The focus of this research was to explore the anti-QS activity of four selected medicinal mushrooms (Lentinula edodes, Cantharellus cibarius, Trametes versicolor and Pleurotus ostreatus) extracts on MDR clinical isolate P. aeruginosa MMA83. Another aim was to check their cytotoxicity on Caenorhabditis elegans AU37 (glp-4(bn2) I; sec-1(km4). Among three types of mushroom extracts - hot water polysaccharide extracts (WPE), hot alkali polysaccharide extracts (APE) and methanol extracts (Met), APE extracts downregulated all tested QS and virulence factors genes of P. aeruginosa MMA83. The most prominent effect was observed for C. cibarius APE extract, lowering expression from 2-fold (for lasI gene) to 20-fold for lasB gene. Extracts didn’t show cytotoxic effect on C. elegans. The efficacy of APE extracts in lowering the expression of QS and virulence factors genes of P. aeruginosa MMA83 indicate that these extracts can reduce pathogenicity of P. aeruginosa. Also, they possess one of the desirable biotechnology features – the absence of cytotoxicity. Anti-QS and antivirulence effect of APE extracts on P. aeruginosa envisages these extracts as the promising therapeutic candidates for the development of next-generation antivirulence agents.Book of abstract: From biotechnology to human and planetary health XIII congress of microbiologists of Serbia with international participation Mikromed regio 5, ums series 24: 4th – 6th april 2024, Mona Plaza hotel, Belgrade, Serbi

    ACINETOBACTER BAUMANNII RESISTANT TO LAST-LINE ANTIBIOTICS: AN EMERGING THREAT IN THE WESTERN BALKANS

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    Acinetobacter baumannii is considered one of the greatest threats to public health on a global scale. This Gram-negative pathogen causes severe infections, mostly of nosocomial origin, with a high mortality rate. In recent years, the rapid increase in the emergence and spread of antibiotic resistance in A. baumannii has significantly limited the effective therapeutic options against infections caused by this bacterium. The last-line antibiotics used in the treatment of multidrug-resistant (MDR) A. baumannii are carbapenems, tigecycline and polymyxins. However, resistance to these antibiotics is steadily increasing, especially to carbapenems, leading to an extensively drug-resistant (XDR) and even pandrug-resistant (PDR) phenotype of A. baumannii. In 2021, the European Centre for Disease Prevention and Control (ECDC) reported that resistance of Acinetobacter spp. to carbapenems reached 50% or more, mostly in Southern and Eastern European countries. Although the Western Balkans is a part of this region, detailed studies on the epidemiology and antibiotic resistance of A. baumannii are mainly limited to Serbia and Croatia. In most cases, carbapenem resistance in A. baumannii is due to the production of carbapenemases, in particular b-lactamases belonging to the class D known as oxacillinases. The studies from the Western Balkan countries revealed that besides the intrinsic blaOXA-51-like gene, the most prevalent acquired oxacillinase gene was the blaOXA- 24-like followed by the blaOXA-23-like, while the blaOXA-58-like and metallo- b-lactamase blaNDM-1 genes were less common. Although significantly lower compared to carbapenem-resistant, the number of A. baumannii isolates resistant to tigecycline and colistin is on a continual rise in the Western Balkans. As worldwide, the main mechanism conferring tigecycline resistance to A. baumannii from the Western Balkans was overexpression of efflux pumps. Also, the majority of reported alternations leading to colistin resistance in A. baumannii were found in the pmrCAB operon, which is responsible for the modification of the colistin target, LPS.Book of abstract: From biotechnology to human and planetary health XIII congress of microbiologists of Serbia with international participation Mikromed regio 5, ums series 24: 4th – 6th april 2024, Mona Plaza hotel, Belgrade, Serbi

    THE ROLE OF EFFLUX PUMPS IN TIGECYCLINE RESISTANCE OF ACINETOBACTER BAUMANNII ISOLATES FROM WESTERN BALKAN HOSPITALS

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    The increasing prevalence of multidrug-resistant (MDR) Acinetobacter baumannii limits effective therapeutic options, and tigecycline has been considered one of the last resort therapies for MDR A. baumannii infections. Nevertheless, A. baumannii isolates resistant to tigecycline are becoming increasingly reported, mostly due to overexpression of efflux pumps. The three major RND efflux systems conferring tigecycline resistance in A. baumannii are AdeABC, AdeFGH, and AdeIJK, and their expression is regulated by the two-component system AdeRS, the LysR-type regulator AdeL, and the TetR-type regulator AdeN, respectively. Following the above, we aimed to determine the role of efflux pumps in tigecycline resistance of thirty-seven A. baumannii isolates collected from Western Balkan healthcare settings (Serbia, Bosnia and Herzegovina and Montenegro) in 2016 and 2022. The majority of isolates belonged to the most prevalent international clonal lineage IC2 (n = 32), four isolates are members of IC1, while only one isolate is identified as IC3. All tested isolates demonstrated a significant decrease in tigecycline MIC in presence of efflux pump inhibitor CCCP (≥16-fold reduction) indicating that mechanism responsible for tigecycline resistance is antibiotic efflux. The comparison of target efflux pump regulatory proteins, translated from nucleotide sequences, to reference strains ATCC19606 and ATCC17978 revealed that most of the isolates have G186V and N268H alternations in AdeS (n = 32), while most common changes in AdeR were V120I and A136V (n = 29) as described in previous studies. Substitution Q262R was detected exclusively in AdeL proteins of IC1 isolates, while no mutations were observed within AdeN regulators. Expression of the adeB, adeG, and adeJ genes in six selected isolates was upregulated in four (1,4- to 3-fold), six (1,6- to 2,6-fold), and three isolates (1,7- to 4-fold), respectively. This study confirmed that overexpression of efflux pump encoding genes enables tigecycline resistance in clinical A. baumannii isolates.Book of abstract: From biotechnology to human and planetary health XIII congress of microbiologists of Serbia with international participation Mikromed regio 5, ums series 24: 4th – 6th april 2024, Mona Plaza hotel, Belgrade, Serbi

    FROM GUT TO LAB: UNLOCKING ANTI-INFLAMMATORY POTENTIAL WITH GABA-PRODUCING BACTERIA

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    Psychobiotics are live bacterial strains impacting the central nervous system, producing neuroactive substances like GABA. GABA from microbiota influences neural signals, affecting neurological parameters, sleep, appetite, mood, and cognition, traversing the intestinal barrier to bind to receptors on enteric neurons and the vagus nerve. Lactobacillus and Bifidobacterium species can synthesize GABA from dietary glutamate, with Lactobacillus rhamnosus shown to reduce anxiety and depressive behavior, elevating hippocampal GABA. Limited knowledge exists about anaerobic GABA producers, warranting further research for a comprehensive understanding. Material for isolation comprised fecal samples from healthy donors, with isolation conducted in an anaerobic chamber within a maximum of 1 hour after sampling. Isolated bacteria were identified through sequencing the 16S rRNA gene. For bacterial cultivation, different types of media were used. PYG medium contains hematine and vitamin K, essential supplements for the cultivation of anaerobic bacteria. All media included 0.1% L-cysteine, playing a role in oxygen reduction, and 0.5% glutamate, a precursor for GABA production. After identification, the presence of GABA in 8 tested bacterial species was determined using the TLC method. Quantification of GABA was performed using the HPLC method. Furthermore, the positive effects observed in Caco2 cells with induced inflammation, after treatment with certain anaerobic postbiotics producing GABA, indicate the potential anti-inflammatory effects of these postbiotics. The study implies anti-inflammatory effects of anaerobic GABA producers, offering insights into the complex interplay among gut microbiota, immune function, and mental health. Recognizing inflammation’s role in depressive symptoms, targeting anaerobic bacteria involved in GABA synthesis could modulate neurotransmitters and inflammatory responses, presenting a comprehensive approach to mental well-being. Advancing research in this area contributes to a holistic understanding of anaerobic bacteria, GABA production, gut microbiota, and mental health. This offers avenues for novel therapeutic approaches and enhances overall quality of life.Book of abstract: From biotechnology to human and planetary health XIII congress of microbiologists of Serbia with international participation Mikromed regio 5, ums series 24: 4th – 6th april 2024, Mona Plaza hotel, Belgrade, Serbi

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    imagine (Institute of molecular genetics and genetic engineering)
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