30584 research outputs found

    xR2RML: Relational and Non-Relational Databases to RDF Mapping Language

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    This document describes xR2RML, a language for expressing customized mappings from various types of databases (XML, object-oriented, NoSQL) to RDF datasets. xR2RML flexibly adapts to heterogeneous query languages and data models while remaining free from any specific language or syntax. It extends R2RML, the W3C recommendation for the mapping of relational databases to RDF, and relies on RML for the handling of various data representation formats

    Impact de la consanguinité et de l’hybridation chez quatre auxiliaires de lutte biologique

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    Inbreeding and hybridization are two genetic processes that may have antagonistic effects in biological control agents (BCAs) rearing. Hybridization can minimize the risk of inbreeding depression (decrease in fitness of inbred individuals), and favor the emergence of advantageous phenotypes. Although the mechanisms of inbreeding depression and the consequences of hybridization are well known, very few studies have been carried out in the context of biological control. The actual effects of inbreeding and hybridization on the fitness of BCAs should be assessed to guide the practices of the biocontrol industry. In a public-private collaboration, data were generated on the effects of inbreeding in the four BCAs Allotropa burrelli, Chrysoperla near comanche, Cryptolaemus montrouzieri and Macrolophus pygmaeus. Inbreeding resulted in a 30% decrease in reproductive success in M. pygmaeus. A thorough study of the consequences of intra-specific hybridization was then carried out using four populations of M. pygmaeus. Three genetic groups separated by strong reproductive isolation were identified. Nevertheless, a fitness advantage for individuals from crosses between genetically distant parents has been highlighted within each genetic group. This work brings data usable in the short term by the partner companies. It also helps to create a corpus of data to better evaluate the real importance of genetic effects in BCAs rearing.La consanguinité et l’hybridation sont deux processus génétiques pouvant avoir des effets antagonistes dans les élevages d’auxiliaires de lutte biologique. L’hybridation peut minimiser les risques de dépression de consanguinité (diminution de fitness des individus consanguins), et favoriser l’apparition de phénotypes avantageux. Bien que les mécanismes de la dépression de consanguinité et des conséquences de l’hybridation soient bien connus, très peu d’études ont été réalisées dans le cadre de la lutte biologique. Il convient d’évaluer les effets réels de la consanguinité et de l’hybridation sur la fitness des auxiliaires pour orienter les pratiques de l’industrie de la lutte biologique. Dans le cadre d’une collaboration public-privé, des données ont été produites sur les effets de la consanguinité chez les quatre auxiliaires Allotropa burrelli, Chrysoperla near comanche, Cryptolaemus montrouzieri et Macrolophus pygmaeus. La consanguinité a notamment provoqué une baisse de 30% du succès reproducteur chez M. pygmaeus. Une étude approfondie des conséquences de l’hybridation intra-spécifique a alors été réalisée en utilisant quatre populations de M. pygmaeus. Trois groupes génétiques séparés par un fort isolement reproducteur ont été mis en évidence. Néanmoins, un avantage de fitness pour les individus issus de croisements entre parents génétiquement distants a été mis en évidence au sein de chaque groupe génétique. Ce travail de thèse apporte des données utilisables à court-terme par les entreprises partenaires. Il contribue par ailleurs à créer un corpus de données pour mieux évaluer l’importance réelle des effets génétiques dans les élevages d’auxiliaires

    A Model to Represent Nomenclatural and Taxonomic Information as Linked Data. Application to the French Taxonomic Register, TAXREF

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    International audienceTaxonomic registers are key tools to help us comprehend the diversity of nature. Publishing such registers in the Web of Data, following the standards and best practices of Linked Open Data (LOD), is a way of integrating multiple data sources into a world-scale, biological knowledge base. In this paper, we present an ongoing work aimed at the publication of TAXREF, the French national taxonomic register, on the Web of Data. Far beyond the mere translation of the TAXREF database into LOD standards, we show that the key point of this endeavor is the design of a model capable of capturing the two coexisting yet distinct realities underlying taxonomic registers, namely the nomenclature (the rules for naming biological entities) and the taxonomy (the description and characterization of these biological entities). We first analyze different modelling choices made to represent some international taxonomic registers as LOD, and we underline the issues that arise from these differences. Then, we propose a model aimed to tackle these issues. This model separates nomenclature from taxonomy, it is flexible enough to accommodate the ever-changing scientific consensus on taxonomy, and it adheres to the philosophy underpinning the Semantic Web standards. Finally, using the example of TAXREF, we show that the model enables interlinking with third-party LOD data sets, may they represent nomenclatural or taxonomic information

    Handling Topical Metadata Regarding the Validity and Completenes of Multiple-Source Information: A possibilistic approach

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    International audienceWe study the problem of aggregating metadata about the validity and/or completeness, with respect to given topics, of information provided by multiple sources. For a given topic, the validity level reflects the certainty that the information stored is true. The completeness level of a source on a given topic reflects the certainty that a piece of information that is not stored is false. We propose a modeling based on possibility theory which allows the fusion of such multi-source information into a graded belief base

    Experimental Observation of the Drag Force Suppression in a Flow of Superfluid Light

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    We report a direct experimental detection of the frictional-superfluid transition in the flow of a fluid of light past a weakly perturbing localized obstacle in a bulk nonlinear crystal. In our cavityless all-optical system, we extract on the one hand a direct optical analog of the drag force experienced by the obstacle and measure on the other hand the associated obstacle displacement. We observe a superfluid regime characterized by a suppression of long-range radiation from the obstacle, which is, as expected, associated to the cancellation of the drag force and the absence of displacement of the obstacle

    Crustal versus mantle core complexes

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    International audienceDeep crustal and mantle rocks are exhumed in core complex mode of extension in three types of structures: metamorphic core complexes, oceanic core complexes and magma poor passive margins. Using available analogue and numerical models and their comparison with natural examples, the present paper reviews the mechanical processes involved in these different types of extensional setting. Three main aspects are considered: i) the primary role of lithosphere rheology, ii) the lithosphere-scale patterns of progressive deformation that lead to the exhumation of deep metamorphic or mantle rocks and iii) the initiation and development of detachment zones. Crustal core complexes develop in continental lithospheres whose Moho temperature is higher than 750 °C with “upper crust-dominated” strength profiles. Contrary to what is commonly believed, it is argued from analogue and numerical models that detachments that accommodate exhumation of core complexes do not initiate at the onset of extension but in the course of progressive extension when the exhuming ductile crust reaches the surface. In models, convex upward detachments result from a rolling hinge process. Mantle core complexes develop in either the oceanic lithosphere, at slow and ultra-slow spreading ridges, or in continental lithospheres, whose initial Moho temperature is lower than 750 °C, with “sub-Moho mantle-dominated” strength profiles. It is argued that the mechanism of mantle exhumation at passive margins is a nearly symmetrical necking process at lithosphere scale without major and permanent detachment, except if strong strain localization could occur in the lithosphere mantle. Distributed crustal extension, by upper crust faulting above a décollement along the ductile crust increases toward the rift axis up to crustal breakup. Mantle rocks exhume in the zone of crustal breakup accommodated by conjugate mantle shear zones that migrate with the rift axis, during increasing extension

    Modeling and Architecture Exploration of Wireless Sensor Network to manage energy in Smart Home

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    International audienceIntelligent electronic equipment and automation network is the brain of high-tech energy management systems in critical role of smart homes dominance. Smart home is a technology integration for greater comfort, autonomy, reduced cost, and energy saving as well. This study will automate intelligently and responsibly to manage energy consumption of home appliances by determining whether the energy from the grid or the battery. This study examines the use of wireless technology (WiFi), new smart plug, to collect instantaneously the power consumed by the different appliances and consolidate the data into a database. This study also tested some measurements on typical household devices and appliances using this infrastructure. Highlighting the results obtained, they can be classified into three types of loads: phantom, intermittent and continuous. This classification will help to define a more efficient energy management policy and a novel architecture of wireless network able to monitor and manage the energy consumption in smart home

    An essential role for the VASt domain of the Arabidopsis VAD1 protein in the regulation of defense and cell death in response to pathogens

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    Several regulators of programmed cell death (PCD) have been identified in plants which encode proteins with putative lipid -binding domains. Among them, VAD1 (Vascular Associated Death) contains a novel protein domain called VASt (VAD1 analog StAR-related lipid transfer) still uncharacterized. The Arabidopsis mutant vadl-1 has been shown to exhibit a lesion mimic phenotype with light-conditional appearance of propagative hypersensitive response -like lesions along the vascular system, associated with defense gene expression and increased resistance to Pseudomonas strains. To test the potential of ectopic expression of VAD1 to influence HR cell death and to elucidate the role of the VASt domain in this function, we performed a structure -function analysis of VAD1 by transient over -expression in Nicotiana benthamiana and by complementation of the mutant vadl-1. We found that (i) overexpression of VAD1 controls negatively the HR cell death and defense expression either transiently in Nicotiana benthamania or in Arabidopsis plants in response to avirulent strains of Pseudomonas syringae, (ii) VAD1 is expressed in multiple subcellular compartments, including the nucleus, and (iii) while the GRAM domain does not modify neither the subcellular localization of VAD1 nor its immunorepressor activity, the domain VASt plays an essential role in both processes. In conclusion, VAD1 acts as a negative regulator of cell death associated with the plant immune response and the VASt domain of this unknown protein plays an essential role in this function, opening the way for the functional analysis of VASt-containing proteins and the characterization of novel mechanisms regulating PCD

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